4.0:Information of module
agp6 agp11 pollen tube
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000278 mitotic cell cycle BP 1.631e-04
GO:1903047 mitotic cell cycle process BP 4.395e-04
GO:0000910 cytokinesis BP 1.064e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009860 pollen tube growth BP 4.238e-05
GO:0009932 cell tip growth BP 1.077e-04
GO:0009826 unidimensional cell growth BP 1.971e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
agp6 agp11 pollen tube		 Log2 signal ratio
bri1-116
1 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 1.259 -0.023
2 250951_at AT5G03550 unknown 1.146 -0.289
3 259817_at AT1G49880 AtErv1, EMB3106, EMBRYO DEFECTIVE 3106, Erv1, Erv1 1.007 -0.044
4 254836_at AT4G12330 CYP706A7, cytochrome P450, family 706, subfamily A, polypeptide 7 0.999 -0.114
5 253264_at AT4G33950 ATOST1, OPEN STOMATA 1, OST1, OPEN STOMATA 1, P44, SNRK2-6, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-6, SNRK2.6, SNF1-RELATED PROTEIN KINASE 2.6, SRK2E 0.973 0.092
6 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.969 0.011
7 251212_at AT3G62480 unknown 0.962 0.027
8 246967_at AT5G24860 ATFPF1, ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FPF1, FLOWERING PROMOTING FACTOR 1 0.857 0.068
9 254961_at AT4G11030 [AMP-dependent synthetase and ligase family protein] 0.830 0.058
10 250135_at AT5G15360 unknown 0.822 -0.063
11 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.818 -0.014
12 257453_at AT1G65130 [Ubiquitin carboxyl-terminal hydrolase-related protein] 0.807 0.124
13 263700_at AT1G31150 [FUNCTIONS IN: sequence-specific DNA binding transcription factor activity] 0.750 0.060
14 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 0.745 -0.489
15 254898_at AT4G11480 CRK32, cysteine-rich RLK (RECEPTOR-like protein kinase) 32 0.721 -0.019
16 248390_at AT5G52000 IMPA-8, importin alpha isoform 8 0.686 0.043
17 246535_at AT5G15900 TBL19, TRICHOME BIREFRINGENCE-LIKE 19 0.680 -0.273
18 247124_at AT5G66060 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.677 0.002
19 267594_at AT2G33000 [ubiquitin-associated (UBA)/TS-N domain-containing protein-related] 0.676 0.008
20 245951_at AT5G19550 AAT2, ASPARTATE AMINOTRANSFERASE 2, ASP2, aspartate aminotransferase 2 0.663 -0.022
21 246534_at AT5G15890 TBL21, TRICHOME BIREFRINGENCE-LIKE 21 0.660 0.011
22 258686_at AT3G07840 [Pectin lyase-like superfamily protein] 0.632 0.030
23 245454_at AT4G16920 [Disease resistance protein (TIR-NBS-LRR class) family] 0.631 0.058
24 258606_at AT3G02840 [ARM repeat superfamily protein] 0.631 -0.130
25 247572_at AT5G61220 [LYR family of Fe/S cluster biogenesis protein] 0.622 0.019
26 261106_at AT1G62990 IXR11, KNAT7, KNOTTED-like homeobox of Arabidopsis thaliana 7 0.620 -0.456
27 255260_at AT4G05040 [ankyrin repeat family protein] 0.602 0.048
28 249368_at AT5G40640 unknown 0.600 0.042
29 266733_at AT2G03280 [O-fucosyltransferase family protein] 0.596 0.168
30 256333_at AT1G76860 LSM3B, SM-like 3B 0.562 0.114
31 262610_at AT1G14140 UCP3, Uncoupling Protein 3 0.561 0.148
32 261022_at AT1G12260 ANAC007, NAC 007, EMB2749, EMBRYO DEFECTIVE 2749, NAC007, NAC 007, VND4, VASCULAR RELATED NAC-DOMAIN PROTEIN 4 0.531 -0.058
33 251563_at AT3G57880 [Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein] 0.528 0.142
34 250059_at AT5G17820 [Peroxidase superfamily protein] 0.525 0.030
35 245497_at AT4G16460 unknown 0.521 -0.006
36 261544_at AT1G63540 [hydroxyproline-rich glycoprotein family protein] 0.521 0.135
37 249177_at AT5G42850 [Thioredoxin superfamily protein] 0.514 0.049
38 247932_at AT5G56920 [Cystatin/monellin superfamily protein] 0.513 0.045
39 259115_at AT3G01360 unknown 0.501 0.057
40 259297_at AT3G05360 AtRLP30, receptor like protein 30, RLP30, receptor like protein 30 0.481 -0.451
41 259815_at AT1G49870 unknown 0.480 0.095
42 261311_at AT1G05770 [Mannose-binding lectin superfamily protein] 0.477 0.049
43 260552_at AT2G43430 GLX2-1, glyoxalase 2-1, GLY1, GLYOXALASE II 0.473 0.042
44 259242_at AT3G33520 ARP6, actin-related protein 6, ATARP6, actin-related protein 6, ESD1, EARLY IN SHORT DAYS 1, SUF3, SUPPRESSOR OF FRI 3 0.468 0.146
45 254728_at AT4G13690 unknown 0.466 0.026
46 264888_at AT1G23070 unknown 0.461 -0.063
47 259750_at AT1G71130 AtERF070, CRF8, cytokinin response factor 8, ERF070, ethylene response factor 70 0.454 0.088
48 262928_at AT1G65760 unknown 0.452 0.010
49 259682_at AT1G63040 [pseudogene] 0.452 0.144
50 251532_at AT3G58530 [RNI-like superfamily protein] 0.449 0.121
51 255569_at AT4G01320 ATSTE24, STE24 0.444 0.037
52 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.442 0.114
53 256676_at AT3G52180 ATPTPKIS1, ATSEX4, DSP4, DUAL-SPECIFICITY PROTEIN PHOSPHATASE 4, SEX4, STARCH-EXCESS 4 0.435 0.056
54 257256_at AT3G21970 unknown 0.432 0.085
55 245380_at AT4G17760 [damaged DNA binding] 0.431 -0.035
56 261378_at AT1G18890 ATCDPK1, calcium-dependent protein kinase 1, AtCPK10, CDPK1, calcium-dependent protein kinase 1, CPK10 0.423 -0.064
57 260844_at AT1G29260 ATPEX7, ARABIDOPSIS PEROXIN 7, PEX7, peroxin 7 0.422 0.082
58 263717_at AT2G13560 NAD-ME1, NAD-dependent malic enzyme 1 0.421 -0.062
59 247301_at AT5G63920 AtTOP3alpha, TOP3A, topoisomerase 3alpha 0.420 -0.077
60 262142_at AT1G52640 [Pentatricopeptide repeat (PPR) superfamily protein] 0.419 0.020
61 261906_at AT1G65080 [Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain] 0.417 0.035
62 248955_at AT5G45600 GAS41, GLIOMAS 41, TAF14B, TBP-ASSOCIATED FACTOR 14B, YAF9a, homolog of yeast YAF9 a 0.411 -0.016
63 264336_at AT1G70360 [F-box family protein] 0.410 0.043
64 266569_at AT2G24080 unknown 0.410 0.021
65 249786_at AT5G24310 ABIL3, ABL interactor-like protein 3 0.410 -0.174
66 251964_at AT3G53370 [S1FA-like DNA-binding protein] 0.405 -0.012
67 260513_at AT1G51490 BGLU36, beta glucosidase 36 0.404 0.087
68 255865_at AT2G30330 BLOS1, BLOC subunit 1 0.404 0.006
69 247714_at AT5G59340 WOX2, WUSCHEL related homeobox 2 0.395 0.003
70 252274_at AT3G49680 ATBCAT-3, BCAT3, branched-chain aminotransferase 3 0.394 -0.040
71 251162_at AT3G63300 FKD1, FORKED 1 0.390 0.102
72 251369_at AT3G60480 unknown 0.385 0.147
73 248588_at AT5G49540 [Rab5-interacting family protein] 0.376 0.034
74 264538_at AT1G55600 ATWRKY10, MINI3, MINISEED 3, WRKY10, WRKY DNA-binding protein 10 0.376 0.012
75 264610_at AT1G04645 [Plant self-incompatibility protein S1 family] 0.374 0.046
76 246567_at AT5G14950 ATGMII, GMII, golgi alpha-mannosidase II 0.361 -0.068
77 251285_at AT3G61770 [Acid phosphatase/vanadium-dependent haloperoxidase-related protein] 0.359 0.072
78 266310_at AT2G26990 ATCSN2, COP12, CONSTITUTIVE PHOTOMORPHOGENIC 12, CSN2, FUS12, FUSCA 12 0.356 0.047
79 246998_at AT5G67370 CGLD27, CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 0.356 -0.112
80 266182_at AT2G02370 [SNARE associated Golgi protein family] 0.351 -0.094
81 267133_at AT2G23440 unknown 0.350 0.061
82 263149_at AT1G53970 unknown 0.349 0.015
83 256175_at AT1G51670 unknown 0.344 0.030
84 253646_at AT4G29810 ATMKK2, MAP kinase kinase 2, MK1, MAP KINASE KINASE 1, MKK2, MAP kinase kinase 2 0.344 -0.070
85 259189_at AT3G01700 AGP11, arabinogalactan protein 11, ATAGP11, ARABINOGALACTAN PROTEIN 11 -1.559 0.060
86 249598_at AT5G37970 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -1.303 -0.009
87 264051_at AT2G22340 unknown -1.299 0.065
88 245579_at AT4G14810 unknown -1.196 -0.017
89 250174_at AT5G14380 AGP6, arabinogalactan protein 6 -1.191 0.079
90 263566_at AT2G15340 [glycine-rich protein] -1.086 0.004
91 247539_at AT5G61710 unknown -1.081 0.175
92 259522_at AT1G12490 [F-box associated ubiquitination effector family protein] -1.072 -0.024
93 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -1.050 -0.694
94 255003_at AT4G09950 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -1.040 0.016
95 252614_at AT3G45220 [Serine protease inhibitor (SERPIN) family protein] -1.033 0.049
96 254753_at AT4G13190 [Protein kinase superfamily protein] -0.993 -0.009
97 262206_at AT2G01090 [Ubiquinol-cytochrome C reductase hinge protein] -0.973 0.145
98 266879_at AT2G44590 ADL1D, DYNAMIN-like 1D, DL1D, DYNAMIN-like 1D -0.968 0.080
99 256741_at AT3G29375 [XH domain-containing protein] -0.941 0.051
100 245448_at AT4G16860 RPP4, recognition of peronospora parasitica 4 -0.924 0.094
101 252651_at AT3G44700 unknown -0.915 0.010
102 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] -0.905 -0.057
103 254908_at AT4G11200 unknown -0.903 0.059
104 251346_at AT3G60980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.894 0.138
105 256407_at AT1G66570 ATSUC7, sucrose-proton symporter 7, SUC7, sucrose-proton symporter 7 -0.894 0.016
106 262404_at AT1G34660 [CACTA-like transposase family (En/Spm), has a 1.1e-114 P-value blast match to GB:BAA20532 ORF of transposon Tdc1 (CACTA-element) (Daucus carota)] -0.873 0.001
107 266645_at AT2G29880 unknown -0.860 0.052
108 255159_at AT4G07810 [copia-like retrotransposon family, has a 7.1e-230 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.840 0.070
109 263828_at AT2G40250 [SGNH hydrolase-type esterase superfamily protein] -0.837 -0.060
110 247682_at AT5G59650 [Leucine-rich repeat protein kinase family protein] -0.835 -0.000
111 256408_at AT1G66610 [TRAF-like superfamily protein] -0.819 0.052
112 249185_at AT5G43030 [Cysteine/Histidine-rich C1 domain family protein] -0.781 -0.242
113 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 -0.777 0.267
114 252663_at AT3G44070 [Glycosyl hydrolase family 35 protein] -0.776 0.139
115 249140_at AT5G43190 [Galactose oxidase/kelch repeat superfamily protein] -0.769 -0.004
116 255237_at AT4G05550 [Mutator-like transposase family, has a 4.9e-80 P-value blast match to Q9S9W4 /247-408 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.750 0.009
117 249874_at AT5G23070 AtTK1b, TK1b, thymidine kinase 1b -0.749 0.263
118 264288_at AT1G62045 unknown -0.744 -0.125
119 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 -0.737 0.020
120 265098_at AT1G04010 ATPSAT1, ERP1, enhanced response to Phytophthora 1, PSAT1, phospholipid sterol acyl transferase 1 -0.734 -0.141
121 267110_at AT2G14800 unknown -0.733 0.253
122 262421_at AT1G50290 unknown -0.732 0.034
123 251046_at AT5G02370 [ATP binding microtubule motor family protein] -0.730 0.033
124 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 -0.723 -0.133
125 254555_at AT4G19570 [Chaperone DnaJ-domain superfamily protein] -0.703 0.025
126 250143_at AT5G14670 ARFA1B, ADP-ribosylation factor A1B, ATARFA1B, ADP-ribosylation factor A1B -0.703 0.058
127 257201_at AT3G23740 unknown -0.699 -0.130
128 264896_at AT1G23210 AtGH9B6, glycosyl hydrolase 9B6, GH9B6, glycosyl hydrolase 9B6 -0.697 -0.095
129 254762_at AT4G13230 [Late embryogenesis abundant protein (LEA) family protein] -0.687 -0.018
130 250830_at AT5G04910 unknown -0.656 0.050
131 254481_at AT4G20480 [Putative endonuclease or glycosyl hydrolase] -0.656 0.027
132 257197_at AT3G23800 SBP3, selenium-binding protein 3 -0.655 -0.131
133 258895_at AT3G05600 [alpha/beta-Hydrolases superfamily protein] -0.654 0.459
134 264611_at AT1G04680 [Pectin lyase-like superfamily protein] -0.649 -0.179
135 248936_at AT5G45710 AT-HSFA4C, HEAT SHOCK TRANSCRIPTION FACTOR A4C, HSFA4C, HEAT SHOCK TRANSCRIPTION FACTOR A4C, RHA1, ROOT HANDEDNESS 1 -0.647 -0.143
136 259476_at AT1G19000 [Homeodomain-like superfamily protein] -0.639 -0.018
137 254015_at AT4G26140 BGAL12, beta-galactosidase 12 -0.616 -0.181
138 256946_at AT3G19040 HAF2, histone acetyltransferase of the TAFII250 family 2, TAF1, TBP-ASSOCIATED FACTOR 1, TAF1B, TBP-ASSOCIATED FACTOR 1B -0.615 0.039
139 246595_at AT5G14780 FDH, formate dehydrogenase -0.610 -0.063
140 264902_at AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 -0.610 -0.172
141 246969_at AT5G24880 unknown -0.597 0.025
142 259880_at AT1G76730 COG0212, Clusters of Orthologous group 212 -0.594 0.168
143 247683_at AT5G59660 [Leucine-rich repeat protein kinase family protein] -0.593 0.065
144 267220_at AT2G02500 ATMEPCT, ISPD, MCT, 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE -0.576 0.146
145 264636_at AT1G65490 unknown -0.571 0.172
146 250037_at AT5G18350 [Disease resistance protein (TIR-NBS-LRR class) family] -0.566 0.058
147 248269_at AT5G53470 ACBP, ACYL-COA BINDING PROTEIN, ACBP1, acyl-CoA binding protein 1, AtACBP1 -0.566 0.062
148 252552_at AT3G45900 [Ribonuclease P protein subunit P38-related] -0.566 -0.035
149 248413_at AT5G51600 ATMAP65-3, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, MAP65-3, MICROTUBULE-ASSOCIATED PROTEIN 65-3, PLE, PLEIADE -0.560 -0.044
150 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.558 0.281
151 248435_at AT5G51210 OLEO3, oleosin3 -0.558 -0.096
152 246486_at AT5G15910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.557 0.013
153 261890_at AT1G80970 [XH domain-containing protein] -0.557 0.002
154 255503_at AT4G02420 LecRK-IV.4, L-type lectin receptor kinase IV.4 -0.555 0.061
155 257424_at AT1G78840 [F-box/RNI-like/FBD-like domains-containing protein] -0.552 0.005
156 246497_at AT5G16220 [Octicosapeptide/Phox/Bem1p family protein] -0.550 0.144
157 251763_at AT3G55730 AtMYB109, myb domain protein 109, MYB109, myb domain protein 109 -0.545 -0.068
158 259110_at AT3G05570 unknown -0.545 0.035
159 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] -0.544 -0.731
160 254956_at AT4G10850 AtSWEET7, SWEET7 -0.539 0.096
161 262918_at AT1G65000 unknown -0.536 0.055
162 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 -0.527 0.013
163 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 -0.523 0.105
164 248336_at AT5G52420 unknown -0.521 0.035
165 266713_at AT2G46760 AtGulLO6, GulLO6, L -gulono-1,4-lactone ( L -GulL) oxidase 6 -0.515 -0.032
166 250958_at AT5G03260 LAC11, laccase 11 -0.508 -0.244
167 260990_at AT1G12180 unknown -0.501 0.019