4.0:Information of module
A1-1
In comparison with CLV3n cells help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044265 cellular macromolecule catabolic process BP 5.724e-03
GO:0009057 macromolecule catabolic process BP 8.113e-03
GO:0000956 nuclear-transcribed mRNA catabolic proce... BP 8.294e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009932 cell tip growth BP 7.121e-04
GO:0048468 cell development BP 1.197e-03
GO:0000904 cell morphogenesis involved in different... BP 1.491e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
A1-1		 Log2 signal ratio
CLV3n cells
1 250064_at AT5G17890 CHS3, CHILLING SENSITIVE 3, DAR4, DA1-related protein 4 0.253 0.121
2 255794_at AT2G33480 ANAC041, NAC domain containing protein 41, NAC041, NAC domain containing protein 41 0.232 -0.352
3 250150_at AT5G14710 unknown 0.218 -0.024
4 265083_at AT1G03820 unknown 0.144 0.033
5 261337_at AT1G44810 [DNA-binding storekeeper protein-related transcriptional regulator] 0.143 -0.108
6 262782_at AT1G13195 [RING/U-box superfamily protein] 0.142 -0.033
7 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 0.138 0.094
8 254153_at AT4G24450 ATGWD2, GWD3, PWD, phosphoglucan, water dikinase 0.137 -0.644
9 259463_at AT1G18950 [DDT domain superfamily] 0.136 -0.067
10 264518_at AT1G09980 [Putative serine esterase family protein] 0.133 0.106
11 257741_at AT3G27340 unknown 0.126 0.038
12 263039_at AT1G23280 [MAK16 protein-related] 0.124 0.021
13 255952_at AT1G22130 AGL104, AGAMOUS-like 104 0.124 0.060
14 265713_at AT2G03530 ATUPS2, ARABIDOPSIS THALIANA UREIDE PERMEASE 2, UPS2, ureide permease 2 0.120 0.063
15 249943_at AT5G22280 unknown 0.119 -0.067
16 249870_at AT5G23080 TGH, TOUGH 0.116 -0.047
17 247942_at AT5G57120 unknown 0.114 0.047
18 256583_at AT3G28850 [Glutaredoxin family protein] 0.111 -0.033
19 264783_at AT1G08650 ATPPCK1, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1, PPCK1, phosphoenolpyruvate carboxylase kinase 1 0.107 -0.176
20 249256_at AT5G41620 unknown 0.105 -0.169
21 255461_at AT4G02780 ABC33, ATCPS1, ARABIDOPSIS THALIANA ENT-COPALYL DIPHOSPHATE SYNTHETASE 1, CPS, CPP synthase, CPS1, ENT-COPALYL DIPHOSPHATE SYNTHETASE 1, GA1, GA REQUIRING 1 0.102 -0.046
22 257273_at AT3G28030 UVH3, ULTRAVIOLET HYPERSENSITIVE 3, UVR1, UV REPAIR DEFECTIVE 1 0.099 -0.175
23 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.094 0.099
24 249817_at AT5G23820 ML3, MD2-related lipid recognition 3 0.092 -0.356
25 250463_at AT5G10030 OBF4, OCS ELEMENT BINDING FACTOR 4, TGA4, TGACG motif-binding factor 4 0.091 -0.013
26 260945_at AT1G05950 unknown 0.088 0.030
27 265528_at AT2G06220 unknown 0.088 0.063
28 265498_at AT2G15740 [C2H2-like zinc finger protein] 0.085 0.016
29 265118_at AT1G62660 [Glycosyl hydrolases family 32 protein] 0.084 0.015
30 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 0.077 -0.531
31 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 0.076 0.087
32 265460_at AT2G46600 [Calcium-binding EF-hand family protein] 0.076 -0.001
33 267467_at AT2G30580 BMI1A, DRIP2, DREB2A-interacting protein 2 0.075 0.068
34 258339_at AT3G16120 [Dynein light chain type 1 family protein] 0.073 0.121
35 265975_at AT2G11270 [citrate synthase-related] 0.073 0.036
36 261040_at AT1G17370 UBP1B, oligouridylate binding protein 1B -0.281 0.151
37 250223_at AT5G14070 ROXY2 -0.265 0.268
38 261651_at AT1G27760 ATSAT32, SALT-TOLERANCE 32, SAT32, SALT-TOLERANCE 32 -0.223 -0.056
39 261961_at AT1G36510 [Nucleic acid-binding proteins superfamily] -0.211 0.133
40 267529_at AT2G45490 AtAUR3, ataurora3, AUR3, ataurora3 -0.210 0.153
41 247053_at AT5G66710 [Protein kinase superfamily protein] -0.205 0.016
42 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.201 0.106
43 260634_at AT1G62410 [MIF4G domain-containing protein] -0.194 0.097
44 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.193 0.015
45 253134_at AT4G35820 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.179 0.069
46 248991_at AT5G45220 [Disease resistance protein (TIR-NBS-LRR class) family] -0.177 0.025
47 260689_at AT1G32290 unknown -0.171 0.244
48 257278_at AT3G14480 [glycine/proline-rich protein] -0.164 0.079
49 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.163 0.088
50 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.163 0.169
51 257179_at AT3G13170 ATSPO11-1 -0.163 -0.034
52 245615_at AT4G14470 [non-LTR retrotransposon family (LINE), has a 2.1e-25 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] -0.161 0.096
53 257752_at AT3G18720 [F-box family protein] -0.161 0.182
54 258704_at AT3G09780 ATCRR1, CCR1, CRINKLY4 related 1 -0.153 0.206
55 261987_at AT1G33710 [RNA-directed DNA polymerase (reverse transcriptase)-related family protein] -0.152 0.094
56 259576_at AT1G35330 [RING/U-box superfamily protein] -0.151 0.002
57 262106_at AT1G02970 ATWEE1, WEE1, WEE1 kinase homolog -0.151 0.113
58 256135_at AT1G48730 unknown -0.149 0.095
59 260088_at AT1G73190 ALPHA-TIP, ALPHA-TONOPLAST INTRINSIC PROTEIN, TIP3;1 -0.147 0.122
60 252251_at AT3G49820 unknown -0.146 0.062
61 257449_at AT2G31420 [FUNCTIONS IN: DNA binding] -0.143 0.119
62 259453_at AT1G44090 ATGA20OX5, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5, GA20OX5, gibberellin 20-oxidase 5 -0.140 0.126
63 258664_at AT3G08700 UBC12, ubiquitin-conjugating enzyme 12 -0.140 0.131
64 247953_at AT5G57260 CYP71B10, cytochrome P450, family 71, subfamily B, polypeptide 10 -0.138 0.090
65 251878_at AT3G54310 unknown -0.137 0.064
66 254070_at AT4G25430 TRM23, TON1 Recruiting Motif 23 -0.136 0.117
67 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.136 0.116
68 247050_at AT5G66660 unknown -0.133 0.160
69 247868_at AT5G57620 AtMYB36, myb domain protein 36, MYB36, myb domain protein 36 -0.133 0.152