4.0:Information of module
rao2 AntimycinA 3h
In comparison with root endodermis and quiescent center pH4.6 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 2.417e-10
GO:0010200 response to chitin BP 4.249e-10
GO:1901700 response to oxygen-containing compound BP 2.548e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043161 proteasome-mediated ubiquitin-dependent ... BP 1.180e-08
GO:0072594 establishment of protein localization to... BP 1.540e-08
GO:0006606 protein import into nucleus BP 2.385e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rao2 AntimycinA 3h		 Log2 signal ratio
root endodermis and quiescent center pH4.6
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.553 0.142
2 265893_at AT2G15042 [Leucine-rich repeat (LRR) family protein] 0.422 -0.003
3 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.395 -0.038
4 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.388 0.022
5 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.376 -0.028
6 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.358 -0.071
7 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.355 0.011
8 257846_at AT3G12910 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] 0.347 -0.020
9 254229_at AT4G23610 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.343 -0.039
10 262384_at AT1G72950 [Disease resistance protein (TIR-NBS class)] 0.311 -0.118
11 249197_at AT5G42380 CML37, calmodulin like 37 0.307 -0.020
12 248759_at AT5G47610 [RING/U-box superfamily protein] 0.298 -0.019
13 262543_at AT1G34245 EPF2, EPIDERMAL PATTERNING FACTOR 2 0.296 0.030
14 256141_at AT1G48640 [Transmembrane amino acid transporter family protein] 0.291 -0.025
15 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE 0.270 -0.012
16 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.269 -0.082
17 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.264 -0.123
18 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 0.261 0.031
19 257057_at AT3G15310 unknown 0.257 0.003
20 252873_at AT4G40020 [Myosin heavy chain-related protein] 0.253 -0.012
21 250043_at AT5G18430 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.248 -0.004
22 265619_at AT2G27320 unknown 0.246 -0.020
23 253655_at AT4G30070 LCR59, low-molecular-weight cysteine-rich 59 0.233 0.067
24 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.230 0.075
25 251336_at AT3G61190 BAP1, BON association protein 1 0.229 -0.028
26 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 0.223 -0.063
27 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 0.221 -0.062
28 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved 0.219 0.020
29 263854_at AT2G04430 atnudt5, nudix hydrolase homolog 5, NUDT5, nudix hydrolase homolog 5 0.217 -0.158
30 248247_at AT5G53210 SPCH, SPEECHLESS 0.209 -0.020
31 266196_at AT2G39110 [Protein kinase superfamily protein] 0.206 0.049
32 247223_at AT5G65070 AGL69, AGAMOUS-like 69, FCL4, MAF4, MADS AFFECTING FLOWERING 4 0.201 -0.014
33 261474_at AT1G14540 PER4, peroxidase 4 0.201 -0.047
34 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.200 -0.121
35 261068_at AT1G07450 [NAD(P)-binding Rossmann-fold superfamily protein] 0.197 0.002
36 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.195 0.126
37 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.195 0.011
38 252346_at AT3G48650 [pseudogene] 0.195 0.096
39 254870_at AT4G11900 [S-locus lectin protein kinase family protein] 0.190 -0.031
40 254647_at AT4G18540 unknown 0.190 0.013
41 264646_at AT1G08860 BON3, BONZAI 3 0.189 -0.086
42 259952_at AT1G71400 AtRLP12, receptor like protein 12, RLP12, receptor like protein 12 0.188 -0.051
43 253002_at AT4G38530 ATPLC1, phospholipase C1, PLC1, phospholipase C1 0.181 -0.075
44 260774_at AT1G78290 SNRK2-8, SNF1-RELATED PROTEIN KINASE 2-8, SNRK2.8, SNF1-RELATED PROTEIN KINASE 2.8, SRK2C, SNF1-RELATED PROTEIN KINASE 2C 0.180 -0.089
45 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.180 0.063
46 265539_at AT2G15830 unknown 0.178 -0.056
47 265892_at AT2G15020 unknown 0.177 -0.059
48 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 0.171 -0.046
49 261981_at AT1G33811 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.170 0.043
50 256093_at AT1G20823 [RING/U-box superfamily protein] 0.170 -0.121
51 264528_at AT1G30810 JMJ18, Jumonji domain-containing protein 18 0.168 0.067
52 258091_at AT3G14560 unknown 0.166 -0.321
53 264001_at AT2G22420 [Peroxidase superfamily protein] 0.164 -0.041
54 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN 0.164 0.030
55 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 0.162 -0.124
56 261958_at AT1G64500 [Glutaredoxin family protein] 0.156 0.048
57 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 0.154 0.072
58 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.153 -0.014
59 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.152 -0.413
60 265728_at AT2G31990 [Exostosin family protein] 0.151 -0.093
61 255016_at AT4G10120 ATSPS4F 0.148 -0.045
62 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.146 -0.023
63 251373_at AT3G60530 GATA4, GATA transcription factor 4 0.145 0.121
64 265723_at AT2G32140 [transmembrane receptors] 0.145 -0.223
65 255028_at AT4G09890 unknown 0.145 -0.214
66 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.144 -0.104
67 262290_at AT1G70985 [hydroxyproline-rich glycoprotein family protein] 0.143 -0.277
68 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.143 -0.101
69 248726_at AT5G47960 ATRABA4C, RAB GTPase homolog A4C, RABA4C, RAB GTPase homolog A4C, SMG1, SMALL MOLECULAR WEIGHT G-PROTEIN 1 0.142 -0.040
70 251871_at AT3G54520 unknown -1.038 0.028
71 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.906 0.654
72 259947_at AT1G71530 [Protein kinase superfamily protein] -0.792 0.450
73 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 -0.702 0.103
74 266618_at AT2G35480 unknown -0.617 0.258
75 266606_at AT2G46310 CRF5, cytokinin response factor 5 -0.546 -0.030
76 264868_at AT1G24095 [Putative thiol-disulphide oxidoreductase DCC] -0.544 0.349
77 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.534 -0.024
78 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 -0.522 0.259
79 260848_at AT1G21850 sks8, SKU5 similar 8 -0.507 0.052
80 258216_at AT3G17980 AtC2, Arabidopsis thaliana C2 domain, AtGAP1, homolog of OsGAP1, C2, C2 domain -0.498 0.040
81 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 -0.489 0.055
82 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 -0.472 0.312
83 245710_at AT5G04330 CYP84A4, CYTOCHROME P450 84A4 -0.467 -0.219
84 264460_at AT1G10170 ATNFXL1, NF-X-like 1, NFXL1, NF-X-like 1 -0.458 0.269
85 262665_at AT1G14070 FUT7, fucosyltransferase 7 -0.458 -0.116
86 254055_at AT4G25330 unknown -0.455 -0.057
87 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 -0.443 0.207
88 263151_at AT1G54120 unknown -0.435 0.271
89 247704_at AT5G59510 DVL18, DEVIL 18, RTFL5, ROTUNDIFOLIA like 5 -0.433 -0.056
90 266738_at AT2G47010 unknown -0.429 -0.094
91 247287_at AT5G64230 unknown -0.403 0.081
92 252539_at AT3G45730 unknown -0.389 0.269
93 255941_at AT1G20350 ATTIM17-1, translocase inner membrane subunit 17-1, TIM17-1, translocase inner membrane subunit 17-1 -0.381 0.247
94 251282_at AT3G61630 CRF6, cytokinin response factor 6 -0.378 0.285
95 245431_at AT4G17080 [Histone H3 K4-specific methyltransferase SET7/9 family protein] -0.377 0.002
96 247431_at AT5G62520 SRO5, similar to RCD one 5 -0.377 -0.119
97 260415_at AT1G69790 [Protein kinase superfamily protein] -0.374 0.138
98 257184_at AT3G13090 ABCC6, ATP-binding cassette C6, ATMRP8, multidrug resistance-associated protein 8, MRP8, multidrug resistance-associated protein 8 -0.369 0.060
99 253824_at AT4G27940 ATMTM1, ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2, MTM1, manganese tracking factor for mitochondrial SOD2 -0.369 0.186
100 247176_at AT5G65110 ACX2, acyl-CoA oxidase 2, ATACX2 -0.364 0.182
101 263734_at AT1G60030 ATNAT7, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 7, NAT7, nucleobase-ascorbate transporter 7 -0.360 -0.141
102 250821_at AT5G05190 unknown -0.338 -0.049
103 256430_at AT3G11020 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2B, DRE/CRT-binding protein 2B -0.337 0.004
104 259976_at AT1G76560 CP12-3, CP12 domain-containing protein 3 -0.337 -0.038
105 264280_at AT1G61820 BGLU46, beta glucosidase 46 -0.334 -0.038
106 253796_at AT4G28460 unknown -0.321 0.222
107 267140_at AT2G38250 [Homeodomain-like superfamily protein] -0.314 0.261
108 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.313 0.221
109 251096_at AT5G01550 LecRK-VI.3, L-type lectin receptor kinase VI.3, LECRKA4.2, lectin receptor kinase a4.1 -0.311 0.134
110 247913_at AT5G57510 unknown -0.305 0.014
111 265003_at AT1G26970 [Protein kinase superfamily protein] -0.303 -0.046
112 256303_at AT1G69550 [disease resistance protein (TIR-NBS-LRR class)] -0.296 -0.049
113 247989_at AT5G56350 [Pyruvate kinase family protein] -0.294 0.098
114 259340_at AT3G03870 unknown -0.293 -0.049
115 266752_at AT2G47000 ABCB4, ATP-binding cassette B4, AtABCB4, ATPGP4, ARABIDOPSIS P-GLYCOPROTEIN 4, MDR4, MULTIDRUG RESISTANCE 4, PGP4, P-GLYCOPROTEIN 4 -0.292 0.075
116 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 -0.282 0.101
117 258679_at AT3G08590 iPGAM2, 2,3-biphosphoglycerate-independent phosphoglycerate mutase 2 -0.280 0.125
118 248101_at AT5G55200 MGE1, mitochondrial GrpE 1 -0.279 0.182
119 265192_at AT1G05060 unknown -0.274 0.107
120 264402_at AT2G25140 CLPB-M, CASEIN LYTIC PROTEINASE B-M, CLPB4, casein lytic proteinase B4, HSP98.7, HEAT SHOCK PROTEIN 98.7 -0.268 0.173
121 245999_at AT5G20650 COPT5, copper transporter 5 -0.268 -0.047
122 257401_at AT1G23550 SRO2, similar to RCD one 2 -0.246 0.120
123 247922_at AT5G57500 [Galactosyltransferase family protein] -0.242 -0.081
124 255647_at AT4G00900 ATECA2, ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ECA2, ER-type Ca2+-ATPase 2 -0.240 -0.068
125 245439_at AT4G16670 unknown -0.240 0.006
126 255259_at AT4G05020 NDB2, NAD(P)H dehydrogenase B2 -0.239 0.012
127 245796_at AT1G32230 ATP8, ARABIDOPSIS THALIANA P8 (INTERACTING PROTEIN), AtRCD1, CEO, CEO1, RCD1, RADICAL-INDUCED CELL DEATH1 -0.239 0.030
128 254603_at AT4G19045 [Mob1/phocein family protein] -0.238 -0.109
129 259969_at AT1G76550 [Phosphofructokinase family protein] -0.235 -0.008
130 259222_at AT3G03680 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.235 0.068
131 262219_at AT1G74750 [Pentatricopeptide repeat (PPR) superfamily protein] -0.232 0.275
132 261063_at AT1G07520 [GRAS family transcription factor] -0.229 -0.037
133 262514_at AT1G34190 anac017, NAC domain containing protein 17, NAC017, NAC domain containing protein 17 -0.228 -0.001
134 254352_at AT4G22320 unknown -0.225 0.028
135 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.221 0.549
136 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 -0.219 0.101
137 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.215 0.115