4.0:Information of module
tga1 tga4 2h KNO3
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006869 lipid transport BP 3.467e-03
GO:0019932 second-messenger-mediated signaling BP 5.972e-03
GO:0009582 detection of abiotic stimulus BP 1.071e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0055072 iron ion homeostasis BP 1.009e-02
GO:0010043 response to zinc ion BP 1.355e-02
GO:0009688 abscisic acid biosynthetic process BP 1.905e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tga1 tga4 2h KNO3		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 252072_at AT3G51710 [D-mannose binding lectin protein with Apple-like carbohydrate-binding domain] 0.213 0.054
2 260620_at AT1G08070 EMB3102, EMBRYO DEFECTIVE 3102, OTP82, ORGANELLE TRANSCRIPT PROCESSING 82 0.184 0.085
3 267414_at AT2G34790 EDA28, EMBRYO SAC DEVELOPMENT ARREST 28, MEE23, MATERNAL EFFECT EMBRYO ARREST 23 0.167 0.123
4 250889_at AT5G04500 [glycosyltransferase family protein 47] 0.162 0.089
5 251933_at AT3G54060 unknown 0.155 0.017
6 258901_at AT3G05640 [Protein phosphatase 2C family protein] 0.150 0.094
7 256815_at AT3G21380 [Mannose-binding lectin superfamily protein] 0.141 0.026
8 266019_at AT2G18750 [Calmodulin-binding protein] 0.133 0.067
9 252405_at AT3G48120 unknown 0.127 -0.004
10 262922_at AT1G79420 unknown 0.124 0.088
11 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 0.123 0.041
12 256077_at AT1G18090 [5'-3' exonuclease family protein] 0.122 0.033
13 247199_at AT5G65210 TGA1, TGACG sequence-specific binding protein 1 -1.099 -0.010
14 250463_at AT5G10030 OBF4, OCS ELEMENT BINDING FACTOR 4, TGA4, TGACG motif-binding factor 4 -0.980 0.028
15 260002_at AT1G67940 ABCI17, ATP-binding cassette I17, ATNAP3, non-intrinsic ABC protein 3, AtSTAR1, NAP3, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3, NAP3, non-intrinsic ABC protein 3 -0.295 -0.085
16 261217_at AT1G32850 UBP11, ubiquitin-specific protease 11 -0.252 0.125
17 265279_at AT2G28460 [Cysteine/Histidine-rich C1 domain family protein] -0.231 -0.037
18 245488_at AT4G16270 [Peroxidase superfamily protein] -0.205 0.006
19 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 -0.197 -0.182
20 251681_at AT3G57100 unknown -0.194 -0.106
21 267286_at AT2G23640 RTNLB13, Reticulan like protein B13 -0.181 -0.038
22 257485_at AT1G63580 [Receptor-like protein kinase-related family protein] -0.179 0.038
23 266497_at AT2G06950 [copia-like retrotransposon family, has a 2.7e-243 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.174 -0.091