4.0:Information of module
tga1 tga4 2h KCl
In comparison with root epidermis and lateral root cap -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 4.989e-04
GO:0015706 nitrate transport BP 7.138e-04
GO:0045454 cell redox homeostasis BP 9.500e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0090304 nucleic acid metabolic process BP 1.291e-04
GO:0006139 nucleobase-containing compound metabolic... BP 1.500e-04
GO:0000278 mitotic cell cycle BP 1.685e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tga1 tga4 2h KCl		 Log2 signal ratio
root epidermis and lateral root cap -S
1 249756_at AT5G24313 unknown 0.335 -0.926
2 252489_at AT3G46710 [NB-ARC domain-containing disease resistance protein] 0.277 -0.061
3 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.245 -0.641
4 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] 0.222 -0.386
5 261218_at AT1G20020 ATLFNR2, LEAF FNR 2, FNR2, ferredoxin-NADP(+)-oxidoreductase 2, LFNR2, leaf-type chloroplast-targeted FNR 2 0.219 0.037
6 246054_at AT5G08360 unknown 0.218 0.015
7 246138_at AT5G19870 unknown 0.216 -0.074
8 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.207 -0.773
9 250778_at AT5G05500 MOP10 0.199 -0.584
10 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 0.196 0.137
11 254251_at AT4G23300 CRK22, cysteine-rich RLK (RECEPTOR-like protein kinase) 22 0.186 -0.023
12 254230_at AT4G23660 AtPPT1, polyprenyltransferase 1, PPT1, polyprenyltransferase 1 0.179 0.141
13 251069_at AT5G01930 AtMAN6, MAN6, endo-beta-mannase 6 0.179 -0.061
14 250431_at AT5G10440 CYCD4;2, cyclin d4;2 0.177 -0.178
15 247799_at AT5G58840 [Subtilase family protein] 0.175 -0.486
16 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.168 -0.219
17 252699_at AT3G43680 unknown 0.168 -0.053
18 247199_at AT5G65210 TGA1, TGACG sequence-specific binding protein 1 -0.800 -0.224
19 250463_at AT5G10030 OBF4, OCS ELEMENT BINDING FACTOR 4, TGA4, TGACG motif-binding factor 4 -0.704 -0.220
20 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.564 -0.150
21 260002_at AT1G67940 ABCI17, ATP-binding cassette I17, ATNAP3, non-intrinsic ABC protein 3, AtSTAR1, NAP3, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3, NAP3, non-intrinsic ABC protein 3 -0.246 -0.240
22 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.234 0.589
23 261223_at AT1G19950 HVA22H, HVA22-like protein H (ATHVA22H) -0.216 0.144
24 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.211 0.106
25 254565_at AT4G19130 [Replication factor-A protein 1-related] -0.201 0.518
26 265195_at AT2G36730 [Pentatricopeptide repeat (PPR) superfamily protein] -0.198 0.298
27 259089_at AT3G04960 unknown -0.190 0.001
28 262431_at AT1G47540 [Scorpion toxin-like knottin superfamily protein] -0.165 0.012
29 258990_at AT3G08840 [D-alanine--D-alanine ligase family] -0.164 -0.050
30 262513_at AT1G34270 [Exostosin family protein] -0.154 0.202
31 265076_at AT1G55490 CPN60B, chaperonin 60 beta, Cpn60beta1, chaperonin-60beta1, LEN1, LESION INITIATION 1 -0.144 0.802
32 252089_at AT3G52110 unknown -0.143 0.372
33 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] -0.134 0.155