4.0:Information of module
tga1 tga4 2h KCl
In comparison with whole roots 140 mM NaCl 32 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 4.989e-04
GO:0015706 nitrate transport BP 7.138e-04
GO:0045454 cell redox homeostasis BP 9.500e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0090304 nucleic acid metabolic process BP 1.291e-04
GO:0006139 nucleobase-containing compound metabolic... BP 1.500e-04
GO:0000278 mitotic cell cycle BP 1.685e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tga1 tga4 2h KCl		 Log2 signal ratio
whole roots 140 mM NaCl 32 hour
1 249756_at AT5G24313 unknown 0.335 0.163
2 252489_at AT3G46710 [NB-ARC domain-containing disease resistance protein] 0.277 0.021
3 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.245 0.279
4 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] 0.222 0.011
5 261218_at AT1G20020 ATLFNR2, LEAF FNR 2, FNR2, ferredoxin-NADP(+)-oxidoreductase 2, LFNR2, leaf-type chloroplast-targeted FNR 2 0.219 -0.005
6 246054_at AT5G08360 unknown 0.218 0.126
7 246138_at AT5G19870 unknown 0.216 0.108
8 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.207 0.100
9 250778_at AT5G05500 MOP10 0.199 0.142
10 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 0.196 -0.141
11 254251_at AT4G23300 CRK22, cysteine-rich RLK (RECEPTOR-like protein kinase) 22 0.186 0.066
12 254230_at AT4G23660 AtPPT1, polyprenyltransferase 1, PPT1, polyprenyltransferase 1 0.179 -0.016
13 251069_at AT5G01930 AtMAN6, MAN6, endo-beta-mannase 6 0.179 0.109
14 250431_at AT5G10440 CYCD4;2, cyclin d4;2 0.177 0.033
15 247799_at AT5G58840 [Subtilase family protein] 0.175 0.045
16 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.168 0.070
17 252699_at AT3G43680 unknown 0.168 -0.053
18 247199_at AT5G65210 TGA1, TGACG sequence-specific binding protein 1 -0.800 0.015
19 250463_at AT5G10030 OBF4, OCS ELEMENT BINDING FACTOR 4, TGA4, TGACG motif-binding factor 4 -0.704 -0.061
20 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.564 0.021
21 260002_at AT1G67940 ABCI17, ATP-binding cassette I17, ATNAP3, non-intrinsic ABC protein 3, AtSTAR1, NAP3, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3, NAP3, non-intrinsic ABC protein 3 -0.246 0.040
22 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.234 -0.056
23 261223_at AT1G19950 HVA22H, HVA22-like protein H (ATHVA22H) -0.216 -0.083
24 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) -0.211 -0.118
25 254565_at AT4G19130 [Replication factor-A protein 1-related] -0.201 -0.048
26 265195_at AT2G36730 [Pentatricopeptide repeat (PPR) superfamily protein] -0.198 -0.117
27 259089_at AT3G04960 unknown -0.190 -0.041
28 262431_at AT1G47540 [Scorpion toxin-like knottin superfamily protein] -0.165 -0.006
29 258990_at AT3G08840 [D-alanine--D-alanine ligase family] -0.164 -0.120
30 262513_at AT1G34270 [Exostosin family protein] -0.154 -0.094
31 265076_at AT1G55490 CPN60B, chaperonin 60 beta, Cpn60beta1, chaperonin-60beta1, LEN1, LESION INITIATION 1 -0.144 -0.063
32 252089_at AT3G52110 unknown -0.143 -0.173
33 250164_at AT5G15280 [Pentatricopeptide repeat (PPR) superfamily protein] -0.134 -0.005