4.0:Information of module
irradiated leaf (cmt 1d)
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002376 immune system process BP 3.531e-24
GO:0045087 innate immune response BP 2.530e-22
GO:0006955 immune response BP 4.231e-22
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006732 coenzyme metabolic process BP 1.953e-04
GO:0051186 cofactor metabolic process BP 3.272e-04
GO:0006084 acetyl-CoA metabolic process BP 1.153e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
irradiated leaf (cmt 1d)		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 1.026 0.780
2 253240_at AT4G34510 KCS17, 3-ketoacyl-CoA synthase 17 0.929 -0.629
3 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 0.928 -0.332
4 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 0.838 0.387
5 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.764 0.539
6 254287_at AT4G22960 unknown 0.758 -0.083
7 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 0.691 0.087
8 250914_at AT5G03780 TRFL10, TRF-like 10 0.674 -0.453
9 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.656 -0.876
10 252539_at AT3G45730 unknown 0.655 -1.435
11 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 0.651 0.080
12 248086_at AT5G55490 ATGEX1, GAMETE EXPRESSED PROTEIN 1, GEX1, gamete expressed protein 1 0.635 -0.859
13 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.627 -0.546
14 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 0.623 -0.928
15 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.613 0.378
16 248321_at AT5G52740 [Copper transport protein family] 0.606 -1.105
17 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.602 0.215
18 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 0.596 -0.257
19 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 0.575 -1.158
20 254565_at AT4G19130 [Replication factor-A protein 1-related] 0.568 0.472
21 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.533 -0.537
22 254242_at AT4G23200 CRK12, cysteine-rich RLK (RECEPTOR-like protein kinase) 12 0.518 -0.205
23 245137_at AT2G45460 [SMAD/FHA domain-containing protein ] 0.506 0.587
24 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 0.499 -0.308
25 260568_at AT2G43570 CHI, chitinase, putative 0.490 0.256
26 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.480 -0.951
27 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.478 -0.867
28 261086_at AT1G17460 TRFL3, TRF-like 3 0.478 -0.282
29 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.474 -0.414
30 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.454 -0.826
31 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.454 0.442
32 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.446 -0.217
33 263133_at AT1G78450 [SOUL heme-binding family protein] -0.353 0.419
34 254098_at AT4G25100 ATFSD1, ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, FSD1, Fe superoxide dismutase 1 -0.349 0.451
35 265539_at AT2G15830 unknown -0.310 -0.364
36 250478_at AT5G10250 DOT3, DEFECTIVELY ORGANIZED TRIBUTARIES 3 -0.251 -1.034
37 256577_at AT3G28220 [TRAF-like family protein] -0.241 -0.621
38 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 -0.228 -1.022
39 260748_at AT1G49210 [RING/U-box superfamily protein] -0.223 -0.144
40 250233_at AT5G13460 IQD11, IQ-domain 11 -0.207 0.451
41 250228_at AT5G13840 CCS52B, cell cycle switch protein 52 B, FZR3, FIZZY-related 3 -0.205 -0.277
42 266516_at AT2G47880 [Glutaredoxin family protein] -0.205 0.348
43 257750_at AT3G18800 unknown -0.201 0.174
44 253832_at AT4G27654 unknown -0.197 -1.506
45 252047_at AT3G52490 SMXL3, SMAX1-like 3 -0.195 -0.269
46 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] -0.179 -0.936
47 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 -0.164 -0.160
48 257794_at AT3G27050 unknown -0.163 1.028
49 249060_at AT5G44560 VPS2.2 -0.162 0.978
50 261761_at AT1G15660 CENP-C, CENP-C HOMOLOGUE, CENP-C, centromere protein C -0.154 1.310
51 255265_at AT4G05190 ATK5, kinesin 5 -0.153 0.658
52 245980_at AT5G13140 [Pollen Ole e 1 allergen and extensin family protein] -0.145 0.942
53 257398_at AT2G01990 unknown -0.140 -0.618
54 257959_at AT3G25560 AtNIK2, NIK2, NSP-interacting kinase 2 -0.137 -0.777
55 251373_at AT3G60530 GATA4, GATA transcription factor 4 -0.137 0.275
56 255012_at AT4G10030 [alpha/beta-Hydrolases superfamily protein] -0.137 -0.084
57 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 -0.135 -0.534
58 250673_at AT5G07070 CIPK2, CBL-interacting protein kinase 2, SnRK3.2, SNF1-RELATED PROTEIN KINASE 3.2 -0.135 -0.774
59 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 -0.134 -1.133
60 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.131 -0.115
61 248204_at AT5G54280 ATM2, myosin 2, ATM4, ARABIDOPSIS THALIANA MYOSIN 4, ATMYOS1, ARABIDOPSIS THALIANA MYOSIN 1 -0.130 -0.742
62 267465_at AT2G19170 SLP3, subtilisin-like serine protease 3 -0.129 0.256
63 259858_at AT1G68400 [leucine-rich repeat transmembrane protein kinase family protein] -0.127 -0.057