4.0:Information of module
irradiated leaf (WT 1d)
In comparison with Col BTH help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010212 response to ionizing radiation BP 7.727e-09
GO:0033554 cellular response to stress BP 1.388e-08
GO:0010332 response to gamma radiation BP 1.711e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006325 chromatin organization BP 2.404e-06
GO:0016568 chromatin modification BP 5.358e-06
GO:1903047 mitotic cell cycle process BP 1.015e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
irradiated leaf (WT 1d)		 Log2 signal ratio
Col BTH
1 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 1.045 0.056
2 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 1.038 -0.020
3 253240_at AT4G34510 KCS17, 3-ketoacyl-CoA synthase 17 0.908 0.047
4 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.852 0.576
5 254287_at AT4G22960 unknown 0.794 -0.027
6 248086_at AT5G55490 ATGEX1, GAMETE EXPRESSED PROTEIN 1, GEX1, gamete expressed protein 1 0.778 -0.076
7 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.751 0.277
8 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 0.750 -0.041
9 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.744 0.067
10 250914_at AT5G03780 TRFL10, TRF-like 10 0.721 0.045
11 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.712 0.015
12 259559_at AT1G21240 WAK3, wall associated kinase 3 0.712 0.637
13 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 0.697 -0.044
14 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 0.695 -0.004
15 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.689 0.375
16 246132_at AT5G20850 ATRAD51, RAD51 0.676 -0.023
17 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.675 -0.056
18 254565_at AT4G19130 [Replication factor-A protein 1-related] 0.671 -0.049
19 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.658 0.493
20 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.653 -0.002
21 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.623 0.413
22 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.622 -0.019
23 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.566 0.577
24 254055_at AT4G25330 unknown 0.517 -0.017
25 257061_at AT3G18250 [Putative membrane lipoprotein] 0.501 0.418
26 245137_at AT2G45460 [SMAD/FHA domain-containing protein ] 0.451 0.020
27 257809_at AT3G27060 ATTSO2, TSO2, TSO MEANING 'UGLY' IN CHINESE 2 0.437 -0.075
28 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.424 0.682
29 246370_at AT1G51920 unknown 0.414 0.169
30 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.401 0.227
31 247618_at AT5G60280 LecRK-I.8, L-type lectin receptor kinase I.8 0.389 0.484
32 261086_at AT1G17460 TRFL3, TRF-like 3 0.385 0.132
33 261222_at AT1G20120 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.373 -0.029
34 259224_at AT3G07800 AtTK1a, TK1a, thymidine kinase 1a 0.361 0.009
35 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.351 0.310
36 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.450 -0.346
37 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A -0.415 -0.650
38 248759_at AT5G47610 [RING/U-box superfamily protein] -0.302 -0.173
39 248509_at AT5G50335 unknown -0.274 -0.281
40 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.269 -0.019
41 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 -0.268 -0.160
42 258222_at AT3G15680 [Ran BP2/NZF zinc finger-like superfamily protein] -0.256 -0.100
43 256603_at AT3G28270 unknown -0.253 0.064
44 252077_at AT3G51720 unknown -0.242 -0.018
45 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.229 -0.237
46 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] -0.202 -0.154
47 261758_at AT1G08250 ADT6, arogenate dehydratase 6, AtADT6, Arabidopsis thaliana arogenate dehydratase 6 -0.197 -0.191
48 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 -0.182 -0.262
49 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 -0.176 -0.098
50 265454_at AT2G46530 ARF11, auxin response factor 11 -0.174 -0.151
51 257895_at AT3G16950 LPD1, lipoamide dehydrogenase 1, ptlpd1 -0.170 -0.144
52 254930_at AT4G11450 unknown -0.168 -0.145
53 266516_at AT2G47880 [Glutaredoxin family protein] -0.166 0.074
54 261411_at AT1G07790 HTB1 -0.162 -0.054
55 252047_at AT3G52490 SMXL3, SMAX1-like 3 -0.155 -0.038
56 254260_at AT4G23440 [Disease resistance protein (TIR-NBS class)] -0.145 -0.051
57 262354_at AT1G64200 VHA-E3, vacuolar H+-ATPase subunit E isoform 3 -0.139 -0.161
58 261451_at AT1G21060 unknown -0.139 -0.022
59 266489_at AT2G35190 ATNPSN11, NPSN11, novel plant snare 11, NSPN11 -0.138 -0.088
60 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.135 -0.247
61 259903_at AT1G74160 TRM4, TON1 Recruiting Motif 4 -0.135 -0.130
62 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.134 0.068
63 267460_at AT2G33810 SPL3, squamosa promoter binding protein-like 3 -0.130 0.068
64 253357_at AT4G33400 [Vacuolar import/degradation, Vid27-related protein] -0.127 -0.070
65 257698_at AT3G12730 [Homeodomain-like superfamily protein] -0.126 -0.053
66 260011_at AT1G68110 [ENTH/ANTH/VHS superfamily protein] -0.123 -0.057
67 247427_at AT5G62580 [ARM repeat superfamily protein] -0.123 -0.079
68 261605_at AT1G49580 [Calcium-dependent protein kinase (CDPK) family protein] -0.120 -0.061
69 245884_at AT5G09300 [Thiamin diphosphate-binding fold (THDP-binding) superfamily protein] -0.118 -0.030