4.0:Information of module
irradiated leaf (WT 1d)
In comparison with seedlings by volatiles from leafminer damaged Lima bean 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010212 response to ionizing radiation BP 7.727e-09
GO:0033554 cellular response to stress BP 1.388e-08
GO:0010332 response to gamma radiation BP 1.711e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006325 chromatin organization BP 2.404e-06
GO:0016568 chromatin modification BP 5.358e-06
GO:1903047 mitotic cell cycle process BP 1.015e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
irradiated leaf (WT 1d)		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 24h
1 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] 1.045 -0.050
2 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase 1.038 -0.029
3 253240_at AT4G34510 KCS17, 3-ketoacyl-CoA synthase 17 0.908 0.026
4 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.852 -0.104
5 254287_at AT4G22960 unknown 0.794 -0.061
6 248086_at AT5G55490 ATGEX1, GAMETE EXPRESSED PROTEIN 1, GEX1, gamete expressed protein 1 0.778 -0.087
7 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.751 -0.023
8 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 0.750 0.001
9 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.744 -0.196
10 250914_at AT5G03780 TRFL10, TRF-like 10 0.721 0.042
11 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 0.712 -0.131
12 259559_at AT1G21240 WAK3, wall associated kinase 3 0.712 -0.145
13 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 0.697 -0.073
14 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 0.695 0.057
15 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.689 -0.006
16 246132_at AT5G20850 ATRAD51, RAD51 0.676 0.022
17 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.675 -0.167
18 254565_at AT4G19130 [Replication factor-A protein 1-related] 0.671 -0.013
19 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.658 -0.034
20 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.653 -0.171
21 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.623 -0.101
22 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.622 -0.272
23 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.566 0.004
24 254055_at AT4G25330 unknown 0.517 0.022
25 257061_at AT3G18250 [Putative membrane lipoprotein] 0.501 0.016
26 245137_at AT2G45460 [SMAD/FHA domain-containing protein ] 0.451 0.007
27 257809_at AT3G27060 ATTSO2, TSO2, TSO MEANING 'UGLY' IN CHINESE 2 0.437 -0.001
28 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.424 -0.033
29 246370_at AT1G51920 unknown 0.414 -0.099
30 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.401 -0.018
31 247618_at AT5G60280 LecRK-I.8, L-type lectin receptor kinase I.8 0.389 -0.081
32 261086_at AT1G17460 TRFL3, TRF-like 3 0.385 0.045
33 261222_at AT1G20120 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.373 0.009
34 259224_at AT3G07800 AtTK1a, TK1a, thymidine kinase 1a 0.361 0.009
35 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.351 0.052
36 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.450 0.123
37 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A -0.415 0.193
38 248759_at AT5G47610 [RING/U-box superfamily protein] -0.302 -0.074
39 248509_at AT5G50335 unknown -0.274 0.073
40 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 -0.269 -0.009
41 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 -0.268 -0.054
42 258222_at AT3G15680 [Ran BP2/NZF zinc finger-like superfamily protein] -0.256 -0.003
43 256603_at AT3G28270 unknown -0.253 -0.017
44 252077_at AT3G51720 unknown -0.242 0.026
45 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.229 -0.065
46 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] -0.202 -0.055
47 261758_at AT1G08250 ADT6, arogenate dehydratase 6, AtADT6, Arabidopsis thaliana arogenate dehydratase 6 -0.197 0.096
48 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 -0.182 0.138
49 259609_at AT1G52410 AtTSA1, TSA1, TSK-associating protein 1 -0.176 0.027
50 265454_at AT2G46530 ARF11, auxin response factor 11 -0.174 -0.013
51 257895_at AT3G16950 LPD1, lipoamide dehydrogenase 1, ptlpd1 -0.170 0.004
52 254930_at AT4G11450 unknown -0.168 -0.009
53 266516_at AT2G47880 [Glutaredoxin family protein] -0.166 0.139
54 261411_at AT1G07790 HTB1 -0.162 0.019
55 252047_at AT3G52490 SMXL3, SMAX1-like 3 -0.155 -0.025
56 254260_at AT4G23440 [Disease resistance protein (TIR-NBS class)] -0.145 -0.055
57 262354_at AT1G64200 VHA-E3, vacuolar H+-ATPase subunit E isoform 3 -0.139 -0.013
58 261451_at AT1G21060 unknown -0.139 -0.125
59 266489_at AT2G35190 ATNPSN11, NPSN11, novel plant snare 11, NSPN11 -0.138 0.000
60 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.135 -0.046
61 259903_at AT1G74160 TRM4, TON1 Recruiting Motif 4 -0.135 -0.012
62 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.134 0.119
63 267460_at AT2G33810 SPL3, squamosa promoter binding protein-like 3 -0.130 -0.081
64 253357_at AT4G33400 [Vacuolar import/degradation, Vid27-related protein] -0.127 0.004
65 257698_at AT3G12730 [Homeodomain-like superfamily protein] -0.126 0.016
66 260011_at AT1G68110 [ENTH/ANTH/VHS superfamily protein] -0.123 0.004
67 247427_at AT5G62580 [ARM repeat superfamily protein] -0.123 0.009
68 261605_at AT1G49580 [Calcium-dependent protein kinase (CDPK) family protein] -0.120 0.013
69 245884_at AT5G09300 [Thiamin diphosphate-binding fold (THDP-binding) superfamily protein] -0.118 0.040