4.0:Information of module
control leaf (cmt 5d)
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000086 G2/M transition of mitotic cell cycle BP 2.973e-03
GO:0010389 regulation of G2/M transition of mitotic... BP 2.973e-03
GO:0044839 cell cycle G2/M phase transition BP 2.973e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007000 nucleolus organization BP 1.311e-02
GO:0010311 lateral root formation BP 1.311e-02
GO:0019915 lipid storage BP 1.575e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
control leaf (cmt 5d)		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 263675_x_at AT2G04770 [CACTA-like transposase family (Ptta/En/Spm), has a 6.0e-20 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.679 -0.406
2 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.606 0.168
3 265537_at AT2G15870 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 0.154 -0.657
4 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.123 0.158
5 266250_at AT2G27870 [similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G22350.1)] 0.110 -1.186
6 261199_at AT1G12950 RSH2, root hair specific 2 0.110 -0.072
7 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.105 -0.969
8 247003_at AT5G67550 unknown 0.102 -0.614
9 256937_at AT3G22620 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.099 -0.405
10 263602_at AT2G16360 [Ribosomal protein S25 family protein] 0.099 -0.096
11 248922_at AT5G45980 STPL, STIMPY-LIKE, WOX8, WUSCHEL related homeobox 8, WOX9B, WUSCHEL related homeobox 9B 0.096 -1.291
12 252215_at AT3G50240 KICP-02 -0.090 -1.035
13 249635_at AT5G36870 ATGSL09, glucan synthase-like 9, atgsl9, gsl09, GSL09, glucan synthase-like 9 -0.088 0.325
14 247736_at AT5G59370 ACT4, actin 4 -0.080 -0.854
15 266438_at AT2G43180 [Phosphoenolpyruvate carboxylase family protein] -0.077 -0.113
16 259720_at AT1G61080 [Hydroxyproline-rich glycoprotein family protein] -0.073 -0.489
17 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 -0.066 -0.568
18 263996_at AT2G22530 [Alkaline-phosphatase-like family protein] -0.066 -0.843
19 259487_at AT1G15720 TRFL5, TRF-like 5 -0.065 -0.366
20 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.063 -0.694
21 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 -0.058 -0.855