4.0:Information of module
control leaf (cmt 5d)
In comparison with whole roots 140 mM NaCl 4 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000086 G2/M transition of mitotic cell cycle BP 2.973e-03
GO:0010389 regulation of G2/M transition of mitotic... BP 2.973e-03
GO:0044839 cell cycle G2/M phase transition BP 2.973e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007000 nucleolus organization BP 1.311e-02
GO:0010311 lateral root formation BP 1.311e-02
GO:0019915 lipid storage BP 1.575e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
control leaf (cmt 5d)		 Log2 signal ratio
whole roots 140 mM NaCl 4 hour
1 263675_x_at AT2G04770 [CACTA-like transposase family (Ptta/En/Spm), has a 6.0e-20 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 0.679 0.031
2 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.606 0.560
3 265537_at AT2G15870 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 0.154 0.024
4 266488_at AT2G47670 PMEI6, PECTIN METHYLESTERASE INHIBITOR 6 0.123 0.017
5 266250_at AT2G27870 [similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G22350.1)] 0.110 0.041
6 261199_at AT1G12950 RSH2, root hair specific 2 0.110 0.058
7 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.105 -0.088
8 247003_at AT5G67550 unknown 0.102 -0.022
9 256937_at AT3G22620 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.099 0.137
10 263602_at AT2G16360 [Ribosomal protein S25 family protein] 0.099 -0.052
11 248922_at AT5G45980 STPL, STIMPY-LIKE, WOX8, WUSCHEL related homeobox 8, WOX9B, WUSCHEL related homeobox 9B 0.096 0.020
12 252215_at AT3G50240 KICP-02 -0.090 0.006
13 249635_at AT5G36870 ATGSL09, glucan synthase-like 9, atgsl9, gsl09, GSL09, glucan synthase-like 9 -0.088 -0.069
14 247736_at AT5G59370 ACT4, actin 4 -0.080 -0.036
15 266438_at AT2G43180 [Phosphoenolpyruvate carboxylase family protein] -0.077 -0.024
16 259720_at AT1G61080 [Hydroxyproline-rich glycoprotein family protein] -0.073 -0.031
17 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 -0.066 -0.156
18 263996_at AT2G22530 [Alkaline-phosphatase-like family protein] -0.066 0.029
19 259487_at AT1G15720 TRFL5, TRF-like 5 -0.065 0.022
20 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 -0.063 0.002
21 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 -0.058 0.107