4.0:Information of module
nbp35-3/-
In comparison with Col-0 2HS help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016114 terpenoid biosynthetic process BP 1.713e-02
GO:0090351 seedling development BP 2.132e-02
GO:0006721 terpenoid metabolic process BP 2.309e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0030244 cellulose biosynthetic process BP 4.460e-03
GO:0051274 beta-glucan biosynthetic process BP 8.337e-03
GO:0043455 regulation of secondary metabolic proces... BP 8.684e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nbp35-3/-		 Log2 signal ratio
Col-0 2HS
1 261814_at AT1G08310 [alpha/beta-Hydrolases superfamily protein] 0.358 0.322
2 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.328 0.121
3 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.310 0.782
4 245505_at AT4G15690 [Thioredoxin superfamily protein] 0.287 0.025
5 266132_at AT2G45130 ATSPX3, ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX3, SPX domain gene 3 0.261 0.627
6 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 0.210 0.481
7 263851_at AT2G04460 unknown 0.193 0.204
8 251143_at AT5G01220 SQD2, sulfoquinovosyldiacylglycerol 2 0.191 0.175
9 267497_at AT2G30540 [Thioredoxin superfamily protein] 0.172 0.098
10 247341_at AT5G63720 KPL, KOKOPELLI 0.146 -0.005
11 255568_at AT4G01250 AtWRKY22, WRKY22 0.145 0.618
12 257664_at AT3G20400 EMB2743, EMBRYO DEFECTIVE 2743 0.136 0.103
13 257263_at AT3G22070 [proline-rich family protein] 0.134 0.097
14 256894_at AT3G21870 CYCP2;1, cyclin p2;1 0.129 0.144
15 256014_at AT1G19200 unknown 0.129 0.330
16 246386_at AT1G77410 BGAL16, beta-galactosidase 16 0.123 -0.009
17 245741_at AT1G44120 CSI2, CELLULOSE SYNTHASE INTERACTIVE 2 0.121 0.010
18 245650_at AT1G24735 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.116 0.034
19 256693_at AT3G32060 [Mutator-like transposase family, has a 4.0e-63 P-value blast match to O80466 /172-336 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.110 0.023
20 256194_at AT1G36810 [pseudogene] 0.110 0.020
21 252989_at AT4G38420 sks9, SKU5 similar 9 0.109 -0.204
22 253769_at AT4G28560 RIC7, ROP-interactive CRIB motif-containing protein 7 0.107 0.019
23 262127_at AT1G52550 unknown 0.105 0.069
24 245029_at AT2G26580 YAB5, YABBY5 0.104 0.063
25 255545_at AT4G01890 [Pectin lyase-like superfamily protein] 0.103 0.037
26 248368_at AT5G51950 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.102 -0.022
27 248205_at AT5G54300 unknown 0.098 -0.041
28 255993_at AT1G29770 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.097 -0.019
29 255174_at AT4G08030 [gypsy-like retrotransposon family (Athila), has a 1.5e-66 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.097 0.025
30 253044_at AT4G37290 unknown 0.096 0.221
31 264311_at AT1G70400 unknown 0.096 0.021
32 258058_at AT3G28980 unknown 0.095 -0.018
33 248408_at AT5G51520 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.094 0.008
34 261243_at AT1G20180 unknown 0.094 0.023
35 256743_at AT3G29370 P1R3, P1R3 0.094 0.146
36 256031_at AT1G34100 [choline kinase, putative, similar to choline kinase (GmCK2p) GI:1438881 from (Glycine max)] 0.093 -0.046
37 264559_at AT1G09610 GXM3, glucuronoxylan methyltransferase 3 0.091 -0.009
38 263067_at AT2G17550 TRM26, TON1 Recruiting Motif 26 0.089 0.046
39 251229_at AT3G62740 BGLU7, beta glucosidase 7 -0.291 0.067
40 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.265 0.158
41 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.255 -0.017
42 247685_at AT5G59680 [Leucine-rich repeat protein kinase family protein] -0.217 -0.018
43 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.211 0.161
44 266222_at AT2G28780 unknown -0.170 -0.346
45 259661_at AT1G55265 unknown -0.156 -0.050
46 261247_at AT1G20070 unknown -0.156 -0.217
47 259394_at AT1G06420 unknown -0.149 -0.162
48 260053_at AT1G78120 TPR12, tetratricopeptide repeat 12 -0.143 -0.086
49 259686_at AT1G63100 [GRAS family transcription factor] -0.143 -0.087
50 251527_at AT3G58650 TRM7, TON1 Recruiting Motif 7 -0.137 -0.042
51 265767_at AT2G48110 MED33B, REF4, REDUCED EPIDERMAL FLUORESCENCE 4 -0.135 -0.045
52 260032_at AT1G68750 ATPPC4, phosphoenolpyruvate carboxylase 4, PPC4, phosphoenolpyruvate carboxylase 4 -0.133 0.004
53 250998_at AT5G02620 ANK1, ankyrin-like1, ATANK1 -0.128 0.115
54 257679_at AT3G20470 ATGRP-5, ATGRP5, GRP-5, GLYCINE-RICH PROTEIN 5, GRP5, glycine-rich protein 5 -0.117 -0.014
55 247883_at AT5G57790 unknown -0.104 0.024
56 249212_at AT5G42690 unknown -0.104 -0.070
57 254186_at AT4G24010 ATCSLG1, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G1, CSLG1, cellulose synthase like G1 -0.104 -0.049
58 247554_at AT5G61010 ATEXO70E2, exocyst subunit exo70 family protein E2, EXO70E2, exocyst subunit exo70 family protein E2 -0.102 -0.082
59 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.102 -0.051
60 264062_at AT2G27950 [Ring/U-Box superfamily protein] -0.101 -0.055
61 252716_at AT3G43920 ATDCL3, DICER-LIKE 3, DCL3, dicer-like 3 -0.100 -0.119
62 254618_at AT4G18780 ATCESA8, CELLULOSE SYNTHASE 8, CESA8, CELLULOSE SYNTHASE 8, IRX1, IRREGULAR XYLEM 1, LEW2, LEAF WILTING 2 -0.098 0.001
63 263003_at AT1G54450 [Calcium-binding EF-hand family protein] -0.097 -0.035
64 258865_at AT3G03200 anac045, NAC domain containing protein 45, NAC045, NAC domain containing protein 45 -0.097 0.045
65 264281_at AT1G61830 [pseudogene] -0.097 -0.012
66 262081_at AT1G59540 ZCF125 -0.095 -0.015
67 247003_at AT5G67550 unknown -0.094 -0.039
68 261741_at AT1G47870 ATE2F2, ATE2FC, ARABIDOPSIS THALIANA HOMOLOG OF E2F C, E2FC -0.093 -0.029
69 257359_x_at AT2G34290 [Protein kinase superfamily protein] -0.093 -0.013
70 246235_at AT4G36830 HOS3-1 -0.092 0.054
71 245068_at AT2G23260 UGT84B1, UDP-glucosyl transferase 84B1 -0.092 0.051
72 250153_at AT5G15130 ATWRKY72, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 72, WRKY72, WRKY DNA-binding protein 72 -0.091 0.155
73 257051_at AT3G15270 SPL5, squamosa promoter binding protein-like 5 -0.089 0.019
74 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.089 -0.033
75 247742_at AT5G58980 [Neutral/alkaline non-lysosomal ceramidase] -0.087 0.098