4.0:Information of module
low R/FR SA
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0018193 peptidyl-amino acid modification BP 2.191e-03
GO:1901616 organic hydroxy compound catabolic proce... BP 2.203e-03
GO:0018205 peptidyl-lysine modification BP 2.953e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044700 single organism signaling BP 1.891e-03
GO:0023052 signaling BP 1.923e-03
GO:0008356 asymmetric cell division BP 3.468e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
low R/FR SA		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.339 0.285
2 245571_at AT4G14695 [Uncharacterised protein family (UPF0041)] 0.292 -0.083
3 253880_at AT4G27590 [Heavy metal transport/detoxification superfamily protein ] 0.288 -0.057
4 263554_at AT2G16410 unknown 0.243 -0.061
5 259421_at AT1G13910 [Leucine-rich repeat (LRR) family protein] 0.233 0.183
6 261845_at AT1G15960 ATNRAMP6, NRAMP6, NRAMP metal ion transporter 6 0.228 -0.059
7 255159_at AT4G07810 [copia-like retrotransposon family, has a 7.1e-230 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 0.222 0.122
8 248946_at AT5G45530 unknown 0.211 0.178
9 253011_at AT4G37890 EDA40, embryo sac development arrest 40 0.210 0.076
10 262149_at AT1G52530 unknown 0.205 -0.144
11 249821_at AT5G23690 [Polynucleotide adenylyltransferase family protein] 0.196 0.100
12 260105_at AT1G35480 [hAT-like transposase family (hobo/Ac/Tam3), has a 8.9e-45 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)] 0.184 0.044
13 247804_at AT5G58170 GDPDL7, Glycerophosphodiester phosphodiesterase (GDPD) like 7, SVL5, SHV3-like 5 0.183 -0.452
14 267300_at AT2G30140 UGT87A2, UDP-glucosyl transferase 87A2 0.183 0.178
15 259999_at AT1G68080 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.179 0.079
16 255877_at AT2G40460 [Major facilitator superfamily protein] 0.171 -0.019
17 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] 0.168 -0.080
18 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 0.168 0.084
19 255276_at AT4G04930 DES-1-LIKE -0.338 -0.027
20 264430_at AT1G61680 ATTPS14, TERPENE SYNTHASE 14, TPS14, terpene synthase 14 -0.302 -0.294
21 249699_at AT5G35540 unknown -0.282 -0.090
22 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 -0.269 -0.034
23 264813_at AT2G17890 CPK16, calcium-dependent protein kinase 16 -0.269 0.060
24 253622_at AT4G30560 ATCNGC9, cyclic nucleotide gated channel 9, CNGC9, cyclic nucleotide gated channel 9 -0.263 -0.069
25 246356_x_at AT1G40150 [gypsy-like retrotransposon family (Athila), has a 3.7e-38 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -0.262 0.061
26 261967_at AT1G36440 unknown -0.262 -0.021
27 249869_at AT5G23050 AAE17, acyl-activating enzyme 17 -0.256 -0.045
28 267068_at AT2G41020 [WW domain-containing protein] -0.254 0.011
29 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 -0.252 -0.015
30 255386_at AT4G03620 [myosin heavy chain-related] -0.241 -0.069
31 262723_at AT1G43630 unknown -0.236 -0.082
32 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 -0.236 -0.113
33 256465_at AT1G32570 unknown -0.229 -0.016
34 263732_at AT1G59980 ARL2, ARG1-like 2, ATDJC39, GPS4, gravity persistence signal 4 -0.228 0.278
35 246655_at AT5G35230 unknown -0.218 -0.280
36 246825_at AT5G26260 [TRAF-like family protein] -0.204 -0.024