4.0:Information of module
high R/FR SA
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0051130 positive regulation of cellular componen... BP 2.364e-03
GO:0043543 protein acylation BP 4.608e-03
GO:0006498 N-terminal protein lipidation BP 8.322e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042542 response to hydrogen peroxide BP 6.481e-03
GO:1901264 carbohydrate derivative transport BP 1.262e-02
GO:0010232 vascular transport BP 1.699e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
high R/FR SA		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 251824_at AT3G55090 ABCG16, ATP-binding cassette G16 0.369 -0.470
2 256672_at AT3G52310 ABCG27, ATP-binding cassette G27 0.326 -0.018
3 258340_at AT3G22770 [F-box associated ubiquitination effector family protein] 0.310 -0.335
4 245467_at AT4G16610 [C2H2-like zinc finger protein] 0.298 0.623
5 256147_at AT1G55080 MED9 0.286 0.837
6 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 0.278 0.222
7 267037_at AT2G38320 TBL34, TRICHOME BIREFRINGENCE-LIKE 34 0.276 -0.107
8 263384_at AT2G40130 SMXL8, SMAX1-like 8 0.267 -1.148
9 255140_x_at AT4G08410 [Proline-rich extensin-like family protein] 0.265 -0.432
10 259781_at AT1G29650 [non-LTR retrotransposon family (LINE), has a 1.5e-28 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)] 0.263 -0.273
11 249115_at AT5G43810 AGO10, ARGONAUTE 10, PNH, PINHEAD, ZLL, ZWILLE 0.256 -0.195
12 245587_at AT4G15020 [hAT transposon superfamily] 0.250 -0.564
13 252651_at AT3G44700 unknown 0.248 -0.942
14 247499_at AT5G61865 unknown 0.247 -0.346
15 260333_at AT1G70500 [Pectin lyase-like superfamily protein] 0.239 -1.043
16 264345_at AT1G11915 unknown 0.234 -0.871
17 252395_at AT3G47950 AHA4, H(+)-ATPase 4, HA4, H(+)-ATPase 4 0.228 -0.163
18 256486_at AT1G31450 [Eukaryotic aspartyl protease family protein] -0.332 -0.856
19 263861_at AT2G04560 AtLpxB, LpxB, lipid X B -0.310 -1.107
20 256465_at AT1G32570 unknown -0.303 0.270
21 261298_at AT1G48510 [Surfeit locus 1 cytochrome c oxidase biogenesis protein] -0.293 -0.081
22 264151_at AT1G02070 unknown -0.274 -0.547
23 263189_at AT1G36100 [myosin heavy chain-related] -0.251 -1.150
24 247802_at AT5G58580 ATL63, TOXICOS EN LEVADURA 63, TL63, TOXICOS EN LEVADURA 63 -0.249 -0.244
25 252253_at AT3G49300 [proline-rich family protein] -0.248 -0.311
26 252726_at AT3G43060 [pseudogene] -0.239 0.104
27 252319_at AT3G48710 [DEK domain-containing chromatin associated protein] -0.239 -0.001
28 245091_at AT2G40910 [F-box and associated interaction domains-containing protein] -0.234 -0.658
29 255877_at AT2G40460 [Major facilitator superfamily protein] -0.223 -0.617
30 265945_at AT2G19500 ATCKX2, CKX2, cytokinin oxidase 2 -0.217 -0.275
31 252755_at AT3G43530 unknown -0.213 -0.576
32 258722_at AT3G09590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.212 -0.562
33 258639_at AT3G07820 [Pectin lyase-like superfamily protein] -0.209 -1.559