4.0:Information of module
OE WRKY40.4 high light
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0045087 innate immune response BP 2.364e-09
GO:0006955 immune response BP 3.349e-09
GO:0009696 salicylic acid metabolic process BP 3.577e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048583 regulation of response to stimulus BP 2.411e-09
GO:0080134 regulation of response to stress BP 3.205e-09
GO:0031347 regulation of defense response BP 4.760e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
OE WRKY40.4 high light		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.695 0.009
2 260706_at AT1G32350 AOX1D, alternative oxidase 1D 0.692 -0.991
3 264648_at AT1G09080 BIP3, binding protein 3 0.649 -1.619
4 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 0.580 -0.519
5 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.572 0.539
6 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.541 0.402
7 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.540 -0.537
8 251480_at AT3G59710 [NAD(P)-binding Rossmann-fold superfamily protein] 0.523 -0.309
9 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.507 0.951
10 256933_at AT3G22600 LTPG5, glycosylphosphatidylinositol-anchored lipid protein transfer 5 0.487 0.107
11 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.484 -0.524
12 264998_at AT1G67330 unknown 0.478 0.894
13 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] 0.443 -0.550
14 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] 0.438 0.227
15 258203_at AT3G13950 unknown 0.433 -0.479
16 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 0.429 -0.928
17 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.421 -0.973
18 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.415 0.024
19 261020_at AT1G26390 [FAD-binding Berberine family protein] 0.414 -0.084
20 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.390 -0.811
21 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.388 -0.681
22 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.388 -0.520
23 260568_at AT2G43570 CHI, chitinase, putative 0.380 0.256
24 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 0.376 -0.955
25 259293_at AT3G11580 [AP2/B3-like transcriptional factor family protein] 0.375 0.479
26 258947_at AT3G01830 [Calcium-binding EF-hand family protein] 0.355 -1.204
27 252345_at AT3G48640 unknown 0.343 -0.810
28 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.336 0.301
29 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.329 0.442
30 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 0.321 -0.647
31 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.312 -0.835
32 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.310 0.273
33 266649_at AT2G25810 TIP4;1, tonoplast intrinsic protein 4;1 0.305 0.559
34 259327_at AT3G16460 JAL34, jacalin-related lectin 34 0.298 0.820
35 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.297 -0.518
36 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.281 0.134
37 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 0.281 0.637
38 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.276 -1.057
39 263126_at AT1G78460 [SOUL heme-binding family protein] 0.274 -0.989
40 267412_at AT2G34940 BP80-3;2, binding protein of 80 kDa 3;2, VSR3;2, VACUOLAR SORTING RECEPTOR 3;2, VSR5, VACUOLAR SORTING RECEPTOR 5 0.273 0.164
41 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.271 0.730
42 266824_at AT2G22800 HAT9 0.271 -0.559
43 262085_at AT1G56060 unknown 0.267 -0.036
44 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.265 0.919
45 252068_at AT3G51440 [Calcium-dependent phosphotriesterase superfamily protein] 0.257 0.757
46 248889_at AT5G46230 unknown 0.257 0.661
47 260170_at AT1G71890 ATSUC5, SUCROSE-PROTON SYMPORTER 5, SUC5 0.251 0.093
48 245148_at AT2G45220 PME17, pectin methylesterase 17 0.246 -0.902
49 266017_at AT2G18690 unknown 0.245 0.242
50 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.245 -0.867
51 257798_at AT3G15950 NAI2 0.243 1.174
52 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.242 0.564
53 254062_at AT4G25380 AtSAP10, Arabidopsis thaliana stress-associated protein 10, SAP10, stress-associated protein 10 0.240 -0.168
54 250942_at AT5G03350 [Legume lectin family protein] 0.238 -0.419
55 260664_at AT1G19510 ATRL5, RAD-like 5, RL5, RAD-like 5, RSM4, RADIALIS-LIKE SANT/MYB 4 0.238 -0.970
56 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.236 0.405
57 255250_at AT4G05100 AtMYB74, myb domain protein 74, MYB74, myb domain protein 74 0.235 -0.366
58 263168_at AT1G03020 [Thioredoxin superfamily protein] 0.228 -0.726
59 248092_at AT5G55170 ATSUMO3, SUM3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO 3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO3, small ubiquitin-like modifier 3 0.227 -0.905
60 252437_at AT3G47380 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.225 -0.722
61 254710_at AT4G18050 ABCB9, ATP-binding cassette B9, PGP9, P-glycoprotein 9 0.223 -0.371
62 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.223 0.393
63 261585_at AT1G01010 ANAC001, NAC domain containing protein 1, NAC001, NAC domain containing protein 1 0.220 -0.186
64 251645_at AT3G57790 [Pectin lyase-like superfamily protein] 0.215 -0.117
65 256296_at AT1G69480 [EXS (ERD1/XPR1/SYG1) family protein] 0.210 0.167
66 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.209 -0.321
67 260728_at AT1G48210 [Protein kinase superfamily protein] 0.207 0.126
68 256603_at AT3G28270 unknown 0.204 -0.453
69 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.204 -0.576
70 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 0.204 -0.663
71 266618_at AT2G35480 unknown 0.201 0.278
72 248246_at AT5G53200 TRY, TRIPTYCHON -0.554 -0.241
73 255503_at AT4G02420 LecRK-IV.4, L-type lectin receptor kinase IV.4 -0.509 -0.691
74 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] -0.483 0.384
75 266175_at AT2G02450 ANAC034, Arabidopsis NAC domain containing protein 34, ANAC035, NAC domain containing protein 35, AtLOV1, LOV1, LONG VEGETATIVE PHASE 1, NAC035, NAC domain containing protein 35 -0.431 -0.278
76 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.424 0.210
77 252573_at AT3G45260 [C2H2-like zinc finger protein] -0.394 -0.196
78 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 -0.391 0.749
79 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 -0.353 -1.405
80 246108_at AT5G28630 [glycine-rich protein] -0.340 -0.080
81 254998_at AT4G09760 [Protein kinase superfamily protein] -0.340 0.297
82 255794_at AT2G33480 ANAC041, NAC domain containing protein 41, NAC041, NAC domain containing protein 41 -0.335 -0.336
83 251987_at AT3G53280 CYP71B5, cytochrome p450 71b5 -0.333 0.505
84 262092_at AT1G56150 SAUR71, SMALL AUXIN UPREGULATED 71 -0.321 -0.985
85 254371_at AT4G21760 BGLU47, beta-glucosidase 47 -0.317 -1.350
86 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.311 -0.851
87 257748_at AT3G18710 ATPUB29, ARABIDOPSIS THALIANA PLANT U-BOX 29, PUB29, plant U-box 29 -0.305 0.257
88 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 -0.297 -0.409
89 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 -0.296 -0.427
90 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.295 -0.868
91 247814_at AT5G58310 ATMES18, ARABIDOPSIS THALIANA METHYL ESTERASE 18, MES18, methyl esterase 18 -0.282 -0.766
92 245627_at AT1G56600 AtGolS2, galactinol synthase 2, GolS2, galactinol synthase 2 -0.281 -0.546
93 254201_at AT4G24130 unknown -0.277 -0.563
94 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 -0.271 -0.982
95 253911_at AT4G27300 [S-locus lectin protein kinase family protein] -0.258 -0.569
96 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 -0.258 -0.394
97 261315_at AT1G53170 ATERF-8, ATERF8, ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4, ERF8, ethylene response factor 8 -0.253 0.294
98 261069_at AT1G07410 ATRAB-A2B, ARABIDOPSIS RAB GTPASE HOMOLOG A2B, ATRABA2B, RAB GTPase homolog A2B, RAB-A2B, RAB GTPASE HOMOLOG A2B, RABA2b, RAB GTPase homolog A2B -0.252 0.387
99 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] -0.247 0.194
100 254034_at AT4G25960 ABCB2, ATP-binding cassette B2, PGP2, P-glycoprotein 2 -0.246 0.611
101 263915_at AT2G36430 unknown -0.243 -0.316
102 260788_at AT1G06260 [Cysteine proteinases superfamily protein] -0.232 -1.018
103 261518_at AT1G71695 [Peroxidase superfamily protein] -0.230 0.837
104 266485_at AT2G47630 [alpha/beta-Hydrolases superfamily protein] -0.226 0.307
105 266968_at AT2G39360 [Protein kinase superfamily protein] -0.226 -0.828
106 245776_at AT1G30260 unknown -0.225 -0.878
107 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.225 0.259
108 245406_at AT4G17160 ATRAB2B, ATRABB1A, RAB GTPase homolog B1A, RABB1a, RAB GTPase homolog B1A -0.224 -0.667
109 255579_at AT4G01460 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.224 0.169
110 264021_at AT2G21200 SAUR7, SMALL AUXIN UPREGULATED RNA 7 -0.218 -1.393
111 251156_at AT3G63060 EDL3, EID1-like 3 -0.218 -1.222
112 260312_at AT1G63880 [Disease resistance protein (TIR-NBS-LRR class) family] -0.218 -0.771
113 262682_at AT1G75900 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.217 -1.228
114 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] -0.215 0.748
115 260820_at AT1G06840 [Leucine-rich repeat protein kinase family protein] -0.214 0.260
116 266277_at AT2G29310 [NAD(P)-binding Rossmann-fold superfamily protein] -0.214 0.464
117 252179_at AT3G50760 GATL2, galacturonosyltransferase-like 2 -0.210 0.799
118 245671_at AT1G28230 ATPUP1, PUP1, purine permease 1 -0.209 0.483
119 246494_at AT5G16190 ATCSLA11, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11, CSLA11, cellulose synthase like A11 -0.209 0.080
120 252478_at AT3G46540 [ENTH/VHS family protein] -0.208 0.489
121 259737_at AT1G64400 LACS3, long-chain acyl-CoA synthetase 3 -0.205 0.131
122 263690_at AT1G26960 AtHB23, homeobox protein 23, HB23, homeobox protein 23 -0.204 0.216
123 256789_at AT3G13672 SINA2 -0.204 0.164
124 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.203 -0.278
125 262286_at AT1G68585 unknown -0.201 0.329
126 250842_at AT5G04490 VTE5, vitamin E pathway gene 5 -0.201 -0.177
127 252037_at AT3G51920 ATCML9, CAM9, calmodulin 9, CML9, CALMODULIN LIKE PROTEIN 9 -0.200 0.244
128 247760_at AT5G59130 [Subtilase family protein] -0.195 0.449
129 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.187 -0.554
130 266320_at AT2G46640 TAC1, Tiller Angle Control 1 -0.187 0.036
131 256671_at AT3G52290 IQD3, IQ-domain 3 -0.187 0.206
132 253097_at AT4G37320 CYP81D5, cytochrome P450, family 81, subfamily D, polypeptide 5 -0.185 -0.412
133 266589_at AT2G46250 [myosin heavy chain-related] -0.185 -0.398
134 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.184 -0.354
135 259418_at AT1G02390 ATGPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2, GPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2 -0.183 -0.101
136 265075_at AT1G55450 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.183 -0.074
137 248271_at AT5G53420 [CCT motif family protein] -0.182 -0.235
138 246233_at AT4G36550 [ARM repeat superfamily protein] -0.180 0.245
139 260876_at AT1G21460 AtSWEET1, SWEET1 -0.178 1.246
140 255856_at AT1G66940 [protein kinase-related] -0.178 -0.203
141 247455_at AT5G62470 ATMYB96, MYB DOMAIN PROTEIN 96, MYB96, myb domain protein 96, MYBCOV1 -0.177 -0.488