4.0:Information of module
OE WRKY40.4
In comparison with low CO2 + light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000911 cytokinesis by cell plate formation BP 1.749e-06
GO:0032506 cytokinetic process BP 2.388e-06
GO:1902410 mitotic cytokinetic process BP 2.388e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0045087 innate immune response BP 1.070e-31
GO:0006955 immune response BP 1.517e-31
GO:0002376 immune system process BP 3.337e-31
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
OE WRKY40.4		 Log2 signal ratio
low CO2 + light
1 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 1.104 0.742
2 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.539 -0.207
3 256603_at AT3G28270 unknown 0.494 0.318
4 251480_at AT3G59710 [NAD(P)-binding Rossmann-fold superfamily protein] 0.468 -0.152
5 259526_at AT1G12570 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.462 -0.117
6 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 0.427 0.275
7 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.418 -0.160
8 246825_at AT5G26260 [TRAF-like family protein] 0.374 0.068
9 260241_at AT1G63710 CYP86A7, cytochrome P450, family 86, subfamily A, polypeptide 7 0.368 -0.123
10 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 0.368 -0.061
11 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.362 0.120
12 264998_at AT1G67330 unknown 0.349 0.000
13 245392_at AT4G15680 [Thioredoxin superfamily protein] 0.292 0.013
14 248924_at AT5G45960 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.292 -0.029
15 247447_at AT5G62730 [Major facilitator superfamily protein] 0.288 -0.016
16 264151_at AT1G02070 unknown 0.288 0.026
17 266824_at AT2G22800 HAT9 0.269 0.057
18 246783_at AT5G27360 SFP2 0.265 0.013
19 253498_at AT4G31890 [ARM repeat superfamily protein] 0.264 -0.197
20 247956_at AT5G56970 ATCKX3, CKX3, cytokinin oxidase 3 0.248 0.061
21 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 0.245 -0.224
22 260515_at AT1G51460 ABCG13, ATP-binding cassette G13 0.242 0.011
23 262212_at AT1G74890 ARR15, response regulator 15 0.240 0.045
24 261772_at AT1G76240 unknown 0.236 -0.126
25 256145_at AT1G48750 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.230 -0.137
26 259089_at AT3G04960 unknown 0.230 -0.014
27 254595_at AT4G18960 AG, AGAMOUS 0.219 0.002
28 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.206 0.097
29 249532_at AT5G38780 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.206 0.061
30 256900_at AT3G24670 [Pectin lyase-like superfamily protein] 0.201 -0.075
31 256210_at AT1G50950 [INVOLVED IN: cell redox homeostasis] 0.200 -0.062
32 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.187 0.090
33 259743_at AT1G71140 [MATE efflux family protein] 0.184 0.030
34 250719_at AT5G06250 DPA4, DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4 0.184 0.022
35 260801_at AT1G78430 RIP4, ROP interactive partner 4 0.182 -0.130
36 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE 0.181 0.590
37 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] 0.179 -0.046
38 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 0.177 -0.302
39 267555_at AT2G32765 ATSUMO5, SUM5, SUMO 5, SUMO5, small ubiquitinrelated modifier 5 0.173 -0.204
40 248232_at AT5G53760 ATMLO11, MILDEW RESISTANCE LOCUS O 11, MLO11, MILDEW RESISTANCE LOCUS O 11 0.171 -0.082
41 252189_at AT3G50070 CYCD3;3, CYCLIN D3;3 0.169 -0.175
42 262971_at AT1G75640 [Leucine-rich receptor-like protein kinase family protein] 0.169 0.038
43 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 0.165 -0.265
44 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.165 -0.033
45 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 0.152 0.054
46 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] 0.152 0.309
47 247903_at AT5G57340 unknown 0.152 0.172
48 259857_at AT1G68430 unknown 0.151 -0.127
49 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.143 -0.184
50 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 0.141 -0.438
51 251067_at AT5G01910 unknown 0.138 -0.078
52 258840_at AT3G04620 DAN1, D NUCLDUO1-ACTIVATEEIC ACID BINDING PROTEIN 1 0.137 0.076
53 265147_at AT1G51380 [DEA(D/H)-box RNA helicase family protein] 0.137 -0.362
54 255494_at AT4G02710 NET1C, Networked 1C 0.137 -0.037
55 257315_at AT3G30775 AT-POX, ATPDH, ATPOX, ARABIDOPSIS THALIANA PROLINE OXIDASE, ERD5, EARLY RESPONSIVE TO DEHYDRATION 5, PDH1, proline dehydrogenase 1, PRO1, PRODH, PROLINE DEHYDROGENASE 0.134 0.786
56 263485_at AT2G29890 ATVLN1, VLN1, villin 1 0.134 -0.223
57 264801_at AT1G08840 emb2411, embryo defective 2411 0.132 -0.139
58 247406_at AT5G62920 ARR6, response regulator 6 0.131 -0.065
59 247280_at AT5G64260 EXL2, EXORDIUM like 2 0.128 0.377
60 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] -0.683 0.376
61 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.653 0.026
62 257625_at AT3G26230 CYP71B24, cytochrome P450, family 71, subfamily B, polypeptide 24 -0.622 0.398
63 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 -0.605 0.210
64 255503_at AT4G02420 LecRK-IV.4, L-type lectin receptor kinase IV.4 -0.599 -0.007
65 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.586 0.198
66 264774_at AT1G22890 unknown -0.557 0.766
67 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 -0.505 0.062
68 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 -0.503 0.318
69 246108_at AT5G28630 [glycine-rich protein] -0.500 -0.030
70 252573_at AT3G45260 [C2H2-like zinc finger protein] -0.493 0.125
71 265075_at AT1G55450 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.479 0.241
72 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 -0.454 0.226
73 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] -0.451 0.054
74 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] -0.427 0.207
75 262508_at AT1G11300 [protein serine/threonine kinases] -0.420 -0.068
76 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] -0.393 0.275
77 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A -0.383 0.758
78 258351_at AT3G17700 ATCNGC20, CYCLIC NUCLEOTIDE-GATED CHANNEL 20, CNBT1, cyclic nucleotide-binding transporter 1, CNGC20, cyclic nucleotide gated channel 20 -0.381 0.155
79 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.380 0.127
80 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 -0.370 0.413
81 251987_at AT3G53280 CYP71B5, cytochrome p450 71b5 -0.369 0.194
82 249486_at AT5G39030 [Protein kinase superfamily protein] -0.360 0.234
83 253911_at AT4G27300 [S-locus lectin protein kinase family protein] -0.357 0.139
84 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 -0.356 0.213
85 255116_at AT4G08850 [Leucine-rich repeat receptor-like protein kinase family protein] -0.355 0.146
86 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] -0.350 0.009
87 253747_at AT4G29050 LecRK-V.9, L-type lectin receptor kinase V.9 -0.350 0.126
88 259887_at AT1G76360 [Protein kinase superfamily protein] -0.349 0.007
89 249125_at AT5G43450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.346 0.585
90 254592_at AT4G18880 AT-HSFA4A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, HSF A4A, heat shock transcription factor A4A -0.345 0.212
91 264200_at AT1G22650 A/N-InvD, alkaline/neutral invertase D -0.344 0.010
92 264746_at AT1G62300 ATWRKY6, WRKY6 -0.341 0.522
93 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] -0.341 0.215
94 260362_at AT1G70530 CRK3, cysteine-rich RLK (RECEPTOR-like protein kinase) 3 -0.340 0.394
95 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.340 0.162
96 262507_at AT1G11330 [S-locus lectin protein kinase family protein] -0.334 -0.123
97 247474_at AT5G62280 unknown -0.330 0.173
98 246293_at AT3G56710 SIB1, sigma factor binding protein 1 -0.326 0.346
99 256681_at AT3G52340 ATSPP2, SUCROSE-PHOSPHATASE 2, SPP2, sucrose-6F-phosphate phosphohydrolase 2 -0.321 -0.139
100 263202_at AT1G05630 5PTASE13, inositol-polyphosphate 5-phosphatase 13, AT5PTASE13, Arabidopsis thaliana inositol-polyphosphate 5-phosphatase 13 -0.321 -0.137
101 266396_at AT2G38790 unknown -0.320 0.427
102 248686_at AT5G48540 [receptor-like protein kinase-related family protein] -0.320 0.261
103 252179_at AT3G50760 GATL2, galacturonosyltransferase-like 2 -0.312 -0.151
104 267381_at AT2G26190 [calmodulin-binding family protein] -0.312 0.212
105 254998_at AT4G09760 [Protein kinase superfamily protein] -0.308 0.095
106 252976_s_at AT4G38550 [Arabidopsis phospholipase-like protein (PEARLI 4) family] -0.307 0.175
107 253476_at AT4G32300 SD2-5, S-domain-2 5 -0.305 0.137
108 247444_at AT5G62630 HIPL2, hipl2 protein precursor -0.305 0.104
109 265993_at AT2G24160 [pseudogene] -0.305 0.264
110 254948_at AT4G11000 [Ankyrin repeat family protein] -0.304 0.111
111 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 -0.303 0.437
112 258764_at AT3G10720 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.297 0.122
113 264636_at AT1G65490 unknown -0.296 0.223
114 246233_at AT4G36550 [ARM repeat superfamily protein] -0.295 0.070
115 256366_at AT1G66880 [Protein kinase superfamily protein] -0.295 0.295
116 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 -0.293 0.397
117 245051_at AT2G23320 AtWRKY15, WRKY15, WRKY DNA-binding protein 15 -0.291 0.418