4.0:Information of module
opr3 OPDA 22 h
In comparison with root epidermis and lateral root cap -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009827 plant-type cell wall modification BP 6.037e-15
GO:0042545 cell wall modification BP 7.045e-13
GO:0009664 plant-type cell wall organization BP 1.683e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010584 pollen exine formation BP 3.052e-09
GO:0010208 pollen wall assembly BP 7.053e-09
GO:0010927 cellular component assembly involved in ... BP 7.053e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
opr3 OPDA 22 h		 Log2 signal ratio
root epidermis and lateral root cap -S
1 249428_at AT5G39870 unknown 0.997 0.013
2 267531_at AT2G41860 CPK14, calcium-dependent protein kinase 14 0.826 -0.003
3 255003_at AT4G09950 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.755 0.198
4 258129_at AT3G24620 ATROPGEF8, ROPGEF8, ROP (rho of plants) guanine nucleotide exchange factor 8 0.629 -0.013
5 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.609 0.417
6 248711_at AT5G48270 unknown 0.608 -0.015
7 249860_at AT5G22860 [Serine carboxypeptidase S28 family protein] 0.600 0.068
8 255831_at AT2G33350 [CCT motif family protein] 0.557 -0.068
9 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.512 0.097
10 251635_at AT3G57510 ADPG1 0.394 -0.024
11 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C 0.383 -0.035
12 257830_at AT3G26690 ATNUDT13, ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13, ATNUDX13, nudix hydrolase homolog 13, NUDX13, nudix hydrolase homolog 13 0.383 -0.069
13 259150_at AT3G10320 [Glycosyltransferase family 61 protein] 0.382 -0.716
14 260012_at AT1G67865 unknown 0.377 -0.018
15 265922_at AT2G18480 [Major facilitator superfamily protein] 0.375 -0.091
16 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 0.345 -0.005
17 266309_at AT2G27140 [HSP20-like chaperones superfamily protein] 0.314 0.422
18 262653_at AT1G14130 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.313 -0.045
19 245543_at AT4G15260 [UDP-Glycosyltransferase superfamily protein] 0.306 -0.191
20 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] 0.300 -0.263
21 257670_at AT3G20340 unknown 0.294 0.207
22 260983_at AT1G53560 [Ribosomal protein L18ae family] 0.288 -0.821
23 253619_at AT4G30460 [glycine-rich protein] 0.281 -0.123
24 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 0.280 -0.052
25 248467_at AT5G50800 AtSWEET13, SWEET13 0.273 -0.021
26 250881_at AT5G04080 unknown 0.264 0.035
27 245635_at AT1G25250 AtIDD16, indeterminate(ID)-domain 16, IDD16, indeterminate(ID)-domain 16 0.260 0.107
28 258815_at AT3G04000 [NAD(P)-binding Rossmann-fold superfamily protein] 0.256 -0.008
29 249136_at AT5G43180 unknown 0.253 0.145
30 264127_at AT1G79250 AGC1.7, AGC kinase 1.7 0.251 -0.195
31 262936_at AT1G79400 ATCHX2, cation/H+ exchanger 2, CHX2, cation/H+ exchanger 2 0.245 -0.107
32 265732_at AT2G01300 unknown 0.240 -0.372
33 253373_at AT4G33150 LKR, LKR/SDH, LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE, SDH, SACCHAROPINE DEHYDROGENASE 0.238 -0.125
34 257196_at AT3G23790 AAE16, acyl activating enzyme 16 0.233 0.093
35 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 0.227 -0.082
36 250449_at AT5G10830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.211 -0.130
37 259076_at AT3G02140 AFP4, ABI FIVE BINDING PROTEIN 4, TMAC2, TWO OR MORE ABRES-CONTAINING GENE 2 0.211 -0.087
38 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 0.211 0.297
39 264430_at AT1G61680 ATTPS14, TERPENE SYNTHASE 14, TPS14, terpene synthase 14 0.210 0.061
40 252937_at AT4G39180 ATSEC14, ARABIDOPSIS THALIANA SECRETION 14, SEC14, SECRETION 14 0.208 -0.143
41 261618_at AT1G33110 [MATE efflux family protein] 0.203 -0.010
42 267358_at AT2G39890 ATPROT1, PROLINE TRANSPORTER 1, PROT1, proline transporter 1 0.202 -0.384
43 262697_at AT1G75940 ATA27, BGLU20, BETA GLUCOSIDASE 20 -1.087 0.004
44 257102_at AT3G25050 XTH3, xyloglucan endotransglucosylase/hydrolase 3 -0.977 -0.072
45 262674_at AT1G75910 EXL4, extracellular lipase 4 -0.960 -0.048
46 253087_at AT4G36350 ATPAP25, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 25, PAP25, purple acid phosphatase 25 -0.958 0.309
47 250091_at AT5G17340 [Putative membrane lipoprotein] -0.941 0.057
48 261222_at AT1G20120 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.839 -0.125
49 256481_at AT1G33430 [Galactosyltransferase family protein] -0.740 -0.044
50 245652_at AT4G13960 [F-box/RNI-like superfamily protein] -0.708 -0.072
51 248872_at AT5G46795 MSP2, microspore-specific promoter 2 -0.654 0.038
52 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.633 0.031
53 256059_at AT1G06990 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.622 -0.104
54 257399_at AT1G23690 unknown -0.617 0.011
55 252160_at AT3G50570 [hydroxyproline-rich glycoprotein family protein] -0.603 -0.116
56 260788_at AT1G06260 [Cysteine proteinases superfamily protein] -0.589 -0.065
57 252005_at AT3G52810 ATPAP21, PURPLE ACID PHOSPHATASE 21, PAP21, purple acid phosphatase 21 -0.566 -0.028
58 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 -0.544 -0.226
59 255806_at AT4G10260 [pfkB-like carbohydrate kinase family protein] -0.523 -0.037
60 245785_at AT1G32180 ATCSLD6, cellulose synthase-like D6, CSLD6, CELLULOSE SYNTHASE LIKE D6, CSLD6, cellulose synthase-like D6 -0.523 -0.001
61 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 -0.493 0.022
62 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] -0.487 0.025
63 253862_at AT4G27330 NZZ, NOZZLE, SPL, SPOROCYTELESS -0.463 -0.062
64 260228_at AT1G74540 CYP98A8, cytochrome P450, family 98, subfamily A, polypeptide 8 -0.436 0.094
65 258767_at AT3G10890 [Glycosyl hydrolase superfamily protein] -0.434 -0.083
66 254494_at AT4G20050 QRT3, QUARTET 3 -0.433 0.142
67 255337_at AT4G04450 AtWRKY42, WRKY42 -0.402 -0.198
68 264431_at AT1G61700 [RNA polymerases N / 8 kDa subunit] -0.395 -0.046
69 256307_at AT1G30350 [Pectin lyase-like superfamily protein] -0.391 -0.019
70 262675_at AT1G75930 EXL6, extracellular lipase 6 -0.387 -0.008
71 259149_at AT3G10340 PAL4, phenylalanine ammonia-lyase 4 -0.387 0.313
72 250636_at AT5G07520 ATGRP-8, ATGRP18, GRP18, glycine-rich protein 18 -0.378 0.042
73 250251_at AT5G13670 UMAMIT15, Usually multiple acids move in and out Transporters 15 -0.375 -0.047
74 258392_at AT3G15400 ATA20, anther 20 -0.359 -0.011
75 261392_at AT1G79780 [Uncharacterised protein family (UPF0497)] -0.321 -0.019
76 261883_at AT1G80870 [Protein kinase superfamily protein] -0.320 0.155
77 250532_at AT5G08540 unknown -0.313 0.176
78 250638_at AT5G07540 ATGRP-6, ATGRP16, GRP16, glycine-rich protein 16 -0.308 -0.067
79 256381_at AT1G66850 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.299 0.054
80 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.294 -0.013
81 245970_at AT5G20710 BGAL7, beta-galactosidase 7 -0.277 -0.154
82 260563_at AT2G43840 UGT74F1, UDP-glycosyltransferase 74 F1 -0.275 -0.125
83 247091_at AT5G66390 PRX72, PEROXIDASE 72 -0.244 -0.078