4.0:Information of module
opr3 OPDA 0.5 h
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002376 immune system process BP 3.788e-10
GO:0031347 regulation of defense response BP 4.636e-10
GO:0031348 negative regulation of defense response BP 6.151e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009791 post-embryonic development BP 3.283e-03
GO:0009845 seed germination BP 1.387e-02
GO:0010029 regulation of seed germination BP 1.481e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
opr3 OPDA 0.5 h		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.464 -0.030
2 263478_at AT2G31880 EVR, EVERSHED, SOBIR1, SUPPRESSOR OF BIR1 1 0.331 -0.105
3 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.299 -0.356
4 253780_at AT4G28400 [Protein phosphatase 2C family protein] 0.296 -0.015
5 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.267 -0.321
6 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 0.257 -0.118
7 262211_at AT1G74930 ORA47 0.252 0.009
8 267539_at AT2G42030 [RING/U-box superfamily protein] 0.233 -0.005
9 249393_at AT5G40170 AtRLP54, receptor like protein 54, RLP54, receptor like protein 54 0.228 -0.007
10 263804_at AT2G40270 [Protein kinase family protein] 0.190 -0.037
11 261650_at AT1G27770 ACA1, autoinhibited Ca2+-ATPase 1, PEA1, PLASTID ENVELOPE ATPASE 1 0.186 -0.048
12 253147_at AT4G35600 CST, CAST AWAY, CX32, CONNEXIN 32, Kin4, kinase 4 0.166 -0.069
13 250676_at AT5G06320 NHL3, NDR1/HIN1-like 3 0.144 -0.088
14 263439_at AT2G28650 ATEXO70H8, exocyst subunit exo70 family protein H8, EXO70H8, exocyst subunit exo70 family protein H8 0.134 0.062
15 250475_at AT5G10180 AST68, ARABIDOPSIS SULFATE TRANSPORTER 68, SULTR2;1, sulfate transporter 2;1 -0.201 0.054
16 258036_at AT3G21210 [zinc ion binding] -0.132 0.111
17 266252_at AT2G27520 [F-box and associated interaction domains-containing protein] -0.129 0.024
18 265248_at AT2G43010 AtPIF4, PIF4, phytochrome interacting factor 4, SRL2 -0.118 0.103
19 257480_at AT1G15640 unknown -0.114 0.006
20 262139_at AT1G52610 [Mutator-like transposase family, has a 2.0e-18 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] -0.111 0.033
21 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 -0.110 0.008
22 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 -0.109 -0.122
23 255742_at AT1G25560 AtTEM1, EDF1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, TEM1, TEMPRANILLO 1 -0.109 -0.082
24 260684_at AT1G17590 NF-YA8, nuclear factor Y, subunit A8 -0.104 0.031
25 260568_at AT2G43570 CHI, chitinase, putative -0.104 -0.324
26 253665_at AT4G30230 unknown -0.102 -0.016
27 257354_x_at AT2G23480 unknown -0.099 0.007