4.0:Information of module
Cor hrpS 10h
In comparison with Rsch CA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 1.447e-17
GO:0002376 immune system process BP 1.181e-16
GO:0009617 response to bacterium BP 2.353e-16
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016114 terpenoid biosynthetic process BP 9.420e-03
GO:0006721 terpenoid metabolic process BP 1.155e-02
GO:0009106 lipoate metabolic process BP 1.164e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Cor hrpS 10h		 Log2 signal ratio
Rsch CA
1 254249_at AT4G23280 CRK20, cysteine-rich RLK (RECEPTOR-like protein kinase) 20 0.683 -0.102
2 260804_at AT1G78410 [VQ motif-containing protein] 0.600 -0.355
3 254229_at AT4G23610 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.585 0.064
4 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] 0.572 -0.535
5 265705_at AT2G03410 [Mo25 family protein] 0.559 -0.060
6 254524_at AT4G20000 [VQ motif-containing protein] 0.500 -0.091
7 261006_at AT1G26410 [FAD-binding Berberine family protein] 0.489 -0.206
8 246370_at AT1G51920 unknown 0.483 -0.276
9 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.443 -0.539
10 252862_at AT4G39830 [Cupredoxin superfamily protein] 0.440 0.011
11 259553_x_at AT1G21310 ATEXT3, extensin 3, EXT3, extensin 3, RSH, ROOT-SHOOT-HYPOCOTYL DEFECTIVE 0.419 -0.304
12 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.410 -0.084
13 262942_at AT1G79450 ALIS5, ALA-interacting subunit 5 0.406 -0.132
14 256969_at AT3G21080 [ABC transporter-related] 0.392 -0.474
15 248298_at AT5G53110 [RING/U-box superfamily protein] 0.387 -0.077
16 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.375 -0.211
17 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 0.353 0.169
18 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.344 -0.240
19 250724_at AT5G06330 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.344 -0.154
20 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.338 -0.058
21 254013_at AT4G26050 PIRL8, plant intracellular ras group-related LRR 8 0.331 0.071
22 252214_at AT3G50260 ATERF#011, CEJ1, cooperatively regulated by ethylene and jasmonate 1, DEAR1, DREB AND EAR MOTIF PROTEIN 1 0.329 0.014
23 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor 0.324 -0.083
24 254574_at AT4G19430 unknown -0.615 0.321
25 257798_at AT3G15950 NAI2 -0.588 -0.019
26 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 -0.537 0.884
27 255652_at AT4G00950 MEE47, maternal effect embryo arrest 47 -0.445 0.305
28 247100_at AT5G66520 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.359 0.011
29 249836_at AT5G23420 HMGB6, high-mobility group box 6 -0.321 -0.036
30 264909_at AT2G17300 unknown -0.315 0.073
31 254431_at AT4G20840 [FAD-binding Berberine family protein] -0.311 0.142
32 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 -0.292 0.045
33 248696_at AT5G48360 [Actin-binding FH2 (formin homology 2) family protein] -0.282 0.056
34 260199_at AT1G67590 [Remorin family protein] -0.281 0.003
35 263612_at AT2G16440 MCM4, MINICHROMOSOME MAINTENANCE 4 -0.280 -0.141
36 250478_at AT5G10250 DOT3, DEFECTIVELY ORGANIZED TRIBUTARIES 3 -0.269 -0.002
37 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.266 -0.021
38 259358_at AT1G13250 GATL3, galacturonosyltransferase-like 3 -0.262 0.002
39 245027_at AT2G26550 HO2, heme oxygenase 2 -0.257 0.136
40 256585_at AT3G28760 unknown -0.250 -0.004
41 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor -0.250 0.066
42 261196_at AT1G12860 ICE2, INDUCER OF CBF EXPRESSION 2, SCRM2, SCREAM 2 -0.249 0.056
43 266357_at AT2G32290 BAM6, beta-amylase 6, BMY5, BETA-AMYLASE 5 -0.249 0.123
44 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 -0.245 -0.057
45 249588_at AT5G37790 [Protein kinase superfamily protein] -0.237 -0.069
46 263169_at AT1G03010 [Phototropic-responsive NPH3 family protein] -0.233 0.001