4.0:Information of module
4C 1h
In comparison with root epidermis and lateral root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.936e-28
GO:0010243 response to organonitrogen compound BP 1.018e-27
GO:1901698 response to nitrogen compound BP 2.860e-24
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 2.717e-05
GO:0015706 nitrate transport BP 3.873e-05
GO:0000041 transition metal ion transport BP 1.685e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
4C 1h		 Log2 signal ratio
root epidermis and lateral root cap 40 mM NaCl
1 254075_at AT4G25470 ATCBF2, CBF2, C-repeat/DRE binding factor 2, DREB1C, DRE/CRT-BINDING PROTEIN 1C, FTQ4, FREEZING TOLERANCE QTL 4 0.915 0.278
2 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.850 0.220
3 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.691 0.155
4 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.597 0.411
5 263182_at AT1G05575 unknown 0.582 0.364
6 253643_at AT4G29780 unknown 0.535 0.253
7 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.521 0.201
8 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 0.497 0.659
9 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.466 0.250
10 254231_at AT4G23810 ATWRKY53, WRKY53 0.462 0.201
11 255568_at AT4G01250 AtWRKY22, WRKY22 0.458 0.009
12 247406_at AT5G62920 ARR6, response regulator 6 0.406 -0.201
13 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 0.373 0.105
14 259466_at AT1G19050 ARR7, response regulator 7 0.362 -0.033
15 265184_at AT1G23710 unknown 0.352 0.196
16 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.345 0.245
17 251196_at AT3G62950 [Thioredoxin superfamily protein] 0.320 -0.068
18 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.310 0.270
19 255734_at AT1G25550 [myb-like transcription factor family protein] 0.292 -0.003
20 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.284 0.266
21 263800_at AT2G24600 [Ankyrin repeat family protein] 0.249 0.105
22 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 0.233 0.754
23 262603_at AT1G15380 GLYI4, glyoxylase I 4 -0.199 0.330
24 249206_at AT5G42630 ATS, ABERRANT TESTA SHAPE, KAN4, KANADI 4 -0.198 -0.309
25 254044_at AT4G25820 ATXTH14, XTH14, xyloglucan endotransglucosylase/hydrolase 14, XTR9, xyloglucan endotransglycosylase 9 -0.198 -0.199
26 250214_at AT5G13870 EXGT-A4, endoxyloglucan transferase A4, XTH5, xyloglucan endotransglucosylase/hydrolase 5 -0.190 -0.083
27 267148_at AT2G23470 RUS4, ROOT UV-B SENSITIVE 4 -0.189 -0.031
28 255873_at AT2G30340 LBD13, LOB domain-containing protein 13 -0.167 -0.091
29 264577_at AT1G05260 RCI3, RARE COLD INDUCIBLE GENE 3, RCI3A -0.164 -0.104
30 262150_at AT1G52520 FRS6, FAR1-related sequence 6 -0.162 0.035
31 253786_at AT4G28650 [Leucine-rich repeat transmembrane protein kinase family protein] -0.154 -0.373
32 246825_at AT5G26260 [TRAF-like family protein] -0.154 -0.117
33 248051_at AT5G56110 AtMYB103, myb domain protein 103, ATMYB80, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 80, MS188, MALE STERILE 188, MYB103, myb domain protein 103, MYB80 -0.154 -0.099
34 253243_at AT4G34560 unknown -0.149 -0.020
35 249306_at AT5G41400 [RING/U-box superfamily protein] -0.142 -0.062
36 254194_at AT4G23980 ARF9, auxin response factor 9 -0.137 -0.045
37 254210_at AT4G23450 AIRP1, ABA Insensitive RING Protein 1, AtAIRP1 -0.135 0.232
38 263869_at AT2G22000 PROPEP6, elicitor peptide 6 precursor -0.134 -0.003
39 250572_at AT5G08210 MIR834A, microRNA834A -0.133 0.210
40 262664_at AT1G13970 unknown -0.132 0.023
41 256667_at AT3G32180 unknown -0.128 0.047
42 261839_at AT1G16040 unknown -0.127 -0.348
43 251304_at AT3G61990 OMTF3, O-MTase family 3 protein -0.122 0.162