4.0:Information of module
4C 7d(SOIL)
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006979 response to oxidative stress BP 3.998e-04
GO:0006810 transport BP 5.568e-04
GO:0016482 cytoplasmic transport BP 7.764e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044281 small molecule metabolic process BP 1.141e-19
GO:1901564 organonitrogen compound metabolic proces... BP 2.714e-18
GO:0044283 small molecule biosynthetic process BP 2.362e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
4C 7d(SOIL)		 Log2 signal ratio
Leafminer damaged seedlings
1 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 1.267 0.916
2 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.955 1.094
3 251793_at AT3G55580 [Regulator of chromosome condensation (RCC1) family protein] 0.949 -0.330
4 256114_at AT1G16850 unknown 0.919 0.455
5 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 0.847 0.073
6 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.827 0.278
7 248467_at AT5G50800 AtSWEET13, SWEET13 0.786 -0.281
8 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.748 -0.058
9 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.713 -0.292
10 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 0.696 1.222
11 260556_at AT2G43620 [Chitinase family protein] 0.688 0.320
12 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.678 0.094
13 258893_at AT3G05660 AtRLP33, receptor like protein 33, RLP33, receptor like protein 33 0.677 0.195
14 248197_at AT5G54190 PORA, protochlorophyllide oxidoreductase A 0.649 0.150
15 258603_at AT3G02990 ATHSFA1E, heat shock transcription factor A1E, HSFA1E, heat shock transcription factor A1E 0.607 0.122
16 257271_at AT3G28007 AtSWEET4, SWEET4 0.553 0.605
17 250670_at AT5G06860 ATPGIP1, POLYGALACTURONASE INHIBITING PROTEIN 1, PGIP1, polygalacturonase inhibiting protein 1 0.552 0.629
18 253595_at AT4G30830 unknown 0.521 -0.023
19 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.491 0.009
20 257154_at AT3G27210 unknown 0.457 0.793
21 252986_at AT4G38380 [MATE efflux family protein] 0.427 0.021
22 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC 0.424 0.272
23 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 0.422 0.406
24 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] 0.410 0.543
25 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.402 0.139
26 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.396 0.556
27 265093_at AT1G03905 ABCI19, ATP-binding cassette I19 0.396 0.272
28 260987_at AT1G53590 NTMC2T6.1, NTMC2TYPE6.1 0.394 0.005
29 267592_at AT2G39710 [Eukaryotic aspartyl protease family protein] 0.393 0.226
30 261048_at AT1G01420 UGT72B3, UDP-glucosyl transferase 72B3 0.370 -0.215
31 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 0.365 -0.149
32 245533_at AT4G15130 ATCCT2, CCT2, phosphorylcholine cytidylyltransferase2 0.362 0.226
33 250971_at AT5G02810 APRR7, PRR7, pseudo-response regulator 7 0.350 0.141
34 264458_at AT1G10410 unknown 0.346 0.357
35 253813_at AT4G28150 unknown 0.334 0.326
36 253343_at AT4G33540 [metallo-beta-lactamase family protein] 0.331 0.326
37 248895_at AT5G46330 FLS2, FLAGELLIN-SENSITIVE 2 0.324 0.340
38 246325_at AT1G16540 ABA3, ABA DEFICIENT 3, ACI2, ALTERED CHLOROPLAST IMPORT 2, ATABA3, AtLOS5, LOS5, LOW OSMOTIC STRESS 5, SIR3, SIRTINOL RESISTANT 3 0.306 0.125
39 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.306 0.728
40 263384_at AT2G40130 SMXL8, SMAX1-like 8 0.297 -0.062
41 246484_at AT5G16040 [Regulator of chromosome condensation (RCC1) family protein] 0.296 -0.033
42 259137_at AT3G10300 [Calcium-binding EF-hand family protein] 0.293 0.523
43 255494_at AT4G02710 NET1C, Networked 1C 0.288 -0.111
44 259721_at AT1G60890 [Phosphatidylinositol-4-phosphate 5-kinase family protein] 0.283 -0.270
45 250151_at AT5G14570 ATNRT2.7, high affinity nitrate transporter 2.7, NRT2.7, high affinity nitrate transporter 2.7 0.278 -0.013
46 252246_at AT3G49725 [GTP-binding protein, HflX] 0.275 0.002
47 245367_at AT4G16265 NRPB9B, NRPD9B, NRPE9B 0.274 0.183
48 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] 0.273 0.150
49 266903_at AT2G34570 MEE21, maternal effect embryo arrest 21 0.272 0.064
50 257719_at AT3G18440 ALMT9, aluminum-activated malate transporter 9, AtALMT9, aluminum-activated malate transporter 9 0.270 0.332
51 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 0.270 0.093
52 249204_at AT5G42570 [B-cell receptor-associated 31-like] 0.267 0.203
53 259971_at AT1G76580 [Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein] 0.265 0.296
54 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] 0.258 0.025
55 267264_at AT2G22970 SCPL11, serine carboxypeptidase-like 11 0.251 0.011
56 261651_at AT1G27760 ATSAT32, SALT-TOLERANCE 32, SAT32, SALT-TOLERANCE 32 0.248 0.109
57 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] 0.246 0.167
58 262682_at AT1G75900 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.239 -0.055
59 259426_at AT1G01470 LEA14, LATE EMBRYOGENESIS ABUNDANT 14, LSR3, LIGHT STRESS-REGULATED 3 0.237 0.351
60 259415_at AT1G02330 unknown 0.235 0.092
61 245933_at AT5G09320 VPS9B 0.232 -0.097
62 260276_at AT1G80450 [VQ motif-containing protein] 0.231 0.697
63 253722_at AT4G29190 AtC3H49, AtOZF2, Arabidopsis thaliana oxidation-related zinc finger 2, AtTZF3, OZF2, oxidation-related zinc finger 2, TZF3, tandem zinc finger 3 0.229 0.263
64 261398_at AT1G79610 ATNHX6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, NHX6, Na+/H+ antiporter 6 0.229 0.103
65 262747_at AT1G28540 unknown 0.228 0.139
66 248607_at AT5G49480 ATCP1, Ca2+-binding protein 1, CP1, Ca2+-binding protein 1 0.228 0.174
67 250141_at AT5G14640 ATSK13, SHAGGY-LIKE KINASE 13, SK13, shaggy-like kinase 13 0.228 -0.056
68 248605_at AT5G49410 unknown 0.227 -0.046
69 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 0.226 -0.184
70 262075_at AT1G59560 DAL2, DIAP1-like protein 2, SPL1, SP1-like 1, ZCF61 0.225 -0.041
71 256952_at AT3G21160 MANIA, ALPHA-MANNOSIDASE IA, MNS2, alpha-mannosidase 2 0.224 -0.060
72 249977_at AT5G18820 Cpn60alpha2, chaperonin-60alpha2, EMB3007, embryo defective 3007 0.223 -0.025
73 258316_at AT3G22660 [rRNA processing protein-related] 0.222 0.064
74 255728_at AT1G25500 [Plasma-membrane choline transporter family protein] 0.216 0.618
75 248765_at AT5G47650 ATNUDT2, nudix hydrolase homolog 2, ATNUDX2, ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2, NUDT2, nudix hydrolase homolog 2 0.215 -0.166
76 252573_at AT3G45260 [C2H2-like zinc finger protein] 0.211 -0.001
77 256077_at AT1G18090 [5'-3' exonuclease family protein] 0.209 -0.246
78 246073_at AT5G20180 [Ribosomal protein L36] 0.209 0.129
79 262079_at AT1G59600 ZCW7 0.208 0.117
80 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.924 -0.505
81 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 -0.886 0.058
82 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.860 -0.422
83 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 -0.817 0.024
84 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 -0.787 0.465
85 249774_at AT5G24150 SQE5, SQUALENE MONOOXYGENASE 5, SQP1 -0.745 -0.279
86 258623_at AT3G02790 MBS1, METHYLENE BLUE SENSITIVITY 1 -0.648 -0.007
87 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.641 -0.061
88 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 -0.617 0.514
89 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.617 -0.136
90 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.616 0.244
91 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.593 -0.177
92 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 -0.525 0.265
93 256603_at AT3G28270 unknown -0.516 -0.020
94 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 -0.515 -0.300
95 257801_at AT3G18750 ATWNK6, ARABIDOPSIS THALIANA WITH NO K 6, WNK6, with no lysine (K) kinase 6, ZIK5 -0.511 -0.539
96 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 -0.482 -0.175
97 256441_at AT3G10940 LSF2, LIKE SEX4 2 -0.482 -0.212
98 254705_at AT4G17870 PYR1, PYRABACTIN RESISTANCE 1, RCAR11, regulatory component of ABA receptor 11 -0.478 -0.170
99 266581_at AT2G46140 [Late embryogenesis abundant protein] -0.471 0.321
100 265118_at AT1G62660 [Glycosyl hydrolases family 32 protein] -0.459 0.377
101 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.452 -0.586
102 245524_at AT4G15920 AtSWEET17, SWEET17 -0.452 0.223
103 262354_at AT1G64200 VHA-E3, vacuolar H+-ATPase subunit E isoform 3 -0.443 0.217
104 260427_at AT1G72430 SAUR78, SMALL AUXIN UPREGULATED RNA 78 -0.441 -0.377
105 246565_at AT5G15530 BCCP2, biotin carboxyl carrier protein 2, CAC1-B -0.437 -0.122
106 255298_at AT4G04840 ATMSRB6, methionine sulfoxide reductase B6, MSRB6, methionine sulfoxide reductase B6 -0.434 0.155
107 254225_at AT4G23670 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.433 -0.006
108 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.433 -0.268
109 249378_at AT5G40450 unknown -0.427 0.010
110 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.421 -0.553
111 263035_at AT1G23860 At-RSZ21, RS-containing zinc finger protein 21, RSZ21, RS-containing zinc finger protein 21, RSZP21, RS-containing zinc finger protein 21, SRZ-21, SRZ21 -0.416 0.028
112 265722_at AT2G40100 LHCB4.3, light harvesting complex photosystem II -0.415 -0.513
113 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 -0.414 0.048
114 253814_at AT4G28290 unknown -0.406 0.149
115 250180_at AT5G14450 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.400 -0.135
116 256400_at AT3G06140 LUL4, LOG2-LIKE UBIQUITIN LIGASE4 -0.388 -0.508
117 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 -0.382 -0.131
118 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.380 -0.268
119 267057_at AT2G32500 [Stress responsive alpha-beta barrel domain protein] -0.374 -0.179
120 257315_at AT3G30775 AT-POX, ATPDH, ATPOX, ARABIDOPSIS THALIANA PROLINE OXIDASE, ERD5, EARLY RESPONSIVE TO DEHYDRATION 5, PDH1, proline dehydrogenase 1, PRO1, PRODH, PROLINE DEHYDROGENASE -0.366 -0.070
121 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.365 0.967
122 266005_at AT2G37340 AT-RS2Z33, arginine/serine-rich zinc knuckle-containing protein 33, ATRSZ33, ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33, RS2Z33, arginine/serine-rich zinc knuckle-containing protein 33, RSZ33, arginine/serine-rich zinc knuckle-containing protein 33 -0.362 -0.005
123 259857_at AT1G68430 unknown -0.360 -0.170
124 245792_at AT1G32100 ATPRR1, PRR1, pinoresinol reductase 1 -0.358 -0.242
125 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 -0.355 -0.442
126 261981_at AT1G33811 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.350 -0.402
127 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.347 -0.273
128 266279_at AT2G29290 [NAD(P)-binding Rossmann-fold superfamily protein] -0.344 -0.231
129 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.342 -0.071
130 245399_at AT4G17340 DELTA-TIP2, TIP2;2, tonoplast intrinsic protein 2;2 -0.341 0.103
131 262813_at AT1G11670 [MATE efflux family protein] -0.340 0.454
132 256458_at AT1G75220 AtERDL6, ERDL6, ERD6-like 6 -0.338 0.287
133 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.337 -0.287
134 261727_at AT1G76090 SMT3, sterol methyltransferase 3 -0.336 0.030
135 251391_at AT3G60910 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.331 -0.156
136 264692_at AT1G70000 [myb-like transcription factor family protein] -0.326 -0.218
137 256880_at AT3G26450 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.319 -0.156
138 246108_at AT5G28630 [glycine-rich protein] -0.316 0.399
139 261801_at AT1G30520 AAE14, acyl-activating enzyme 14 -0.313 -0.520
140 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.313 0.147
141 247638_at AT5G60490 AtFLA12, FLA12, FASCICLIN-like arabinogalactan-protein 12 -0.313 -0.300
142 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 -0.310 0.110
143 267123_at AT2G23560 ATMES7, ARABIDOPSIS THALIANA METHYL ESTERASE 7, MES7, methyl esterase 7 -0.310 0.102
144 260872_at AT1G21350 [Thioredoxin superfamily protein] -0.308 -0.112
145 249002_at AT5G44520 [NagB/RpiA/CoA transferase-like superfamily protein] -0.308 -0.176
146 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 -0.304 0.029
147 261819_at AT1G11410 [S-locus lectin protein kinase family protein] -0.303 -0.388
148 257017_at AT3G19620 [Glycosyl hydrolase family protein] -0.303 -0.201
149 250304_at AT5G12110 [Glutathione S-transferase, C-terminal-like] -0.300 -0.525
150 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A -0.297 -0.526
151 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.297 -0.068
152 261751_at AT1G76080 ATCDSP32, ARABIDOPSIS THALIANA CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD, CDSP32, chloroplastic drought-induced stress protein of 32 kD -0.295 -0.061
153 256832_at AT3G22880 ARLIM15, ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ATDMC1, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DMC1, DISRUPTION OF MEIOTIC CONTROL 1 -0.295 -0.107
154 250664_at AT5G07080 [HXXXD-type acyl-transferase family protein] -0.292 -0.066
155 248776_at AT5G47900 unknown -0.292 -0.185
156 263972_at AT2G42760 unknown -0.288 0.451
157 265071_at AT1G55520 ATTBP2, A. THALIANA TATA BINDING PROTEIN 2, TBP2, TATA binding protein 2 -0.288 -0.076