4.0:Information of module
Botrytis cinerea 48h
In comparison with csn4-1 dark help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 2.332e-40
GO:0010033 response to organic substance BP 6.118e-36
GO:0050896 response to stimulus BP 1.354e-35
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 5.477e-05
GO:0010073 meristem maintenance BP 1.089e-04
GO:0048573 photoperiodism, flowering BP 3.228e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Botrytis cinerea 48h		 Log2 signal ratio
csn4-1 dark
1 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 1.508 0.025
2 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 1.488 0.149
3 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 1.487 0.965
4 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 1.389 0.162
5 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 1.388 0.409
6 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 1.355 0.142
7 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 1.340 -0.388
8 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 1.247 -0.355
9 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 1.237 0.005
10 254189_at AT4G24000 ATCSLG2, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G2, CSLG2, cellulose synthase like G2 1.230 0.079
11 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 1.207 -0.075
12 251293_at AT3G61930 unknown 1.194 0.123
13 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 1.182 -0.128
14 265796_at AT2G35730 [Heavy metal transport/detoxification superfamily protein ] 1.172 0.231
15 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1.169 0.128
16 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.149 0.064
17 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 1.145 0.131
18 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 1.143 0.156
19 258957_at AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 1.139 0.335
20 262047_at AT1G80160 GLYI7, glyoxylase I 7 1.129 0.443
21 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 1.113 -0.464
22 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 1.112 -0.021
23 259150_at AT3G10320 [Glycosyltransferase family 61 protein] 1.100 0.053
24 260706_at AT1G32350 AOX1D, alternative oxidase 1D 1.091 0.188
25 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 1.089 0.501
26 263228_at AT1G30700 [FAD-binding Berberine family protein] 1.078 0.370
27 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 1.078 0.165
28 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.075 0.240
29 264433_at AT1G61810 BGLU45, beta-glucosidase 45 1.066 -0.050
30 260140_at AT1G66390 ATMYB90, MYB90, myb domain protein 90, PAP2, PRODUCTION OF ANTHOCYANIN PIGMENT 2 1.061 0.352
31 257592_at AT3G24982 ATRLP40, receptor like protein 40, RLP40, receptor like protein 40 1.053 0.238
32 245076_at AT2G23170 GH3.3 1.046 -0.654
33 258182_at AT3G21500 DXL1, DXS-like 1, DXPS1, 1-deoxy-D-xylulose 5-phosphate synthase 1, DXS2, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 2 1.041 0.150
34 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 1.027 -0.256
35 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 1.027 0.321
36 251456_at AT3G60120 BGLU27, beta glucosidase 27 1.014 0.118
37 250287_at AT5G13330 Rap2.6L, related to AP2 6l 1.013 0.541
38 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 1.006 0.359
39 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 1.000 0.289
40 246984_at AT5G67310 CYP81G1, cytochrome P450, family 81, subfamily G, polypeptide 1 1.000 0.052
41 260101_at AT1G73260 ATKTI1, ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, KTI1, kunitz trypsin inhibitor 1 0.997 0.215
42 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.993 0.365
43 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.990 0.289
44 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.986 -0.207
45 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.979 0.035
46 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 0.974 0.500
47 264580_at AT1G05340 unknown 0.973 0.284
48 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 0.971 0.487
49 254630_at AT4G18360 GOX3, glycolate oxidase 3 0.966 0.060
50 253060_at AT4G37710 [VQ motif-containing protein] 0.965 0.216
51 266376_at AT2G14620 XTH10, xyloglucan endotransglucosylase/hydrolase 10 0.960 -0.070
52 256024_at AT1G58340 BCD1, BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRZ, ZRIZI 0.960 -0.095
53 261242_at AT1G32960 ATSBT3.3, SBT3.3 0.959 0.227
54 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.955 0.155
55 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.954 0.224
56 265984_at AT2G24210 TPS10, terpene synthase 10 0.952 0.209
57 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.947 -0.193
58 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.946 0.230
59 249454_at AT5G39520 unknown 0.940 0.783
60 260015_at AT1G67980 CCOAMT, caffeoyl-CoA 3-O-methyltransferase 0.939 0.156
61 253505_at AT4G31970 CYP82C2, cytochrome P450, family 82, subfamily C, polypeptide 2 0.928 0.187
62 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.927 -0.049
63 260408_at AT1G69880 ATH8, thioredoxin H-type 8, TH8, thioredoxin H-type 8 0.912 0.489
64 248528_at AT5G50760 SAUR55, SMALL AUXIN UPREGULATED RNA 55 0.910 0.077
65 260933_at AT1G02470 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.906 0.312
66 266752_at AT2G47000 ABCB4, ATP-binding cassette B4, AtABCB4, ATPGP4, ARABIDOPSIS P-GLYCOPROTEIN 4, MDR4, MULTIDRUG RESISTANCE 4, PGP4, P-GLYCOPROTEIN 4 0.904 0.025
67 267559_at AT2G45570 CYP76C2, cytochrome P450, family 76, subfamily C, polypeptide 2 0.903 0.257
68 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.900 0.025
69 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] 0.890 0.115
70 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] 0.890 -0.023
71 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.888 0.437
72 263829_at AT2G40435 unknown 0.862 0.164
73 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.859 0.401
74 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.834 0.182
75 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.830 0.010
76 247799_at AT5G58840 [Subtilase family protein] 0.826 0.034
77 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.821 0.070
78 245444_at AT4G16740 ATTPS03, terpene synthase 03, TPS03, terpene synthase 03 0.805 0.148
79 250213_at AT5G13820 ATBP-1, ATBP1, ATTBP1, HPPBF-1, H-PROTEIN PROMOTE, TBP1, telomeric DNA binding protein 1 0.799 -0.083
80 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 0.799 -0.034
81 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.798 -0.030
82 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -0.971 -1.164
83 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 -0.834 -0.893
84 251575_at AT3G58120 ATBZIP61, BZIP61 -0.714 -1.017
85 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 -0.683 -0.943
86 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.677 -0.546
87 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A -0.657 -0.039
88 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 -0.641 -0.545
89 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] -0.602 -0.821
90 254638_at AT4G18740 [Rho termination factor] -0.591 -0.390
91 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.545 -0.825
92 265066_at AT1G03870 FLA9, FASCICLIN-like arabinoogalactan 9 -0.535 -0.208
93 264238_at AT1G54740 unknown -0.503 -0.381
94 261975_at AT1G64640 AtENODL8, ENODL8, early nodulin-like protein 8 -0.501 -0.439
95 249932_at AT5G22390 unknown -0.489 -0.412
96 251142_at AT5G01015 unknown -0.488 -0.345
97 264605_at AT1G04550 BDL, BODENLOS, IAA12, indole-3-acetic acid inducible 12 -0.465 -0.182
98 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 -0.455 -0.559
99 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.446 -0.169
100 253255_at AT4G34760 SAUR50, SMALL AUXIN UPREGULATED RNA 50 -0.443 -0.200
101 265387_at AT2G20670 unknown -0.443 -0.322
102 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 -0.435 -0.556
103 261594_at AT1G33240 AT-GTL1, GT2-LIKE 1, ATGTL1, GTL1, GT-2-like 1 -0.425 -0.412
104 247162_at AT5G65730 XTH6, xyloglucan endotransglucosylase/hydrolase 6 -0.424 -0.221
105 259822_at AT1G66230 AtMYB20, myb domain protein 20, MYB20, myb domain protein 20 -0.422 -0.124
106 247069_at AT5G66920 sks17, SKU5 similar 17 -0.419 -0.442
107 260109_at AT1G63260 TET10, tetraspanin10 -0.418 -0.084
108 265175_at AT1G23480 ATCSLA03, cellulose synthase-like A3, ATCSLA3, CSLA03, CSLA03, cellulose synthase-like A3, CSLA3, CELLULOSE SYNTHASE-LIKE A3 -0.409 -0.614
109 249392_at AT5G40150 [Peroxidase superfamily protein] -0.407 -0.164
110 253165_at AT4G35320 unknown -0.406 -0.384
111 256894_at AT3G21870 CYCP2;1, cyclin p2;1 -0.404 -0.001
112 245318_at AT4G16980 [arabinogalactan-protein family] -0.400 -0.069
113 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.396 -1.004
114 266460_at AT2G47930 AGP26, arabinogalactan protein 26, ATAGP26, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 26 -0.395 -0.297
115 267339_at AT2G39870 unknown -0.389 -0.288
116 256400_at AT3G06140 LUL4, LOG2-LIKE UBIQUITIN LIGASE4 -0.385 -0.328
117 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.380 -0.609
118 246439_at AT5G17600 [RING/U-box superfamily protein] -0.375 -0.220
119 259010_at AT3G07340 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.359 -0.333
120 267034_at AT2G38310 PYL4, PYR1-like 4, RCAR10, regulatory components of ABA receptor 10 -0.359 -0.102
121 253062_at AT4G37590 MEL1, MAB4/ENP/NPY1-LIKE 1, NPY5, NAKED PINS IN YUC MUTANTS 5 -0.354 -0.692
122 262421_at AT1G50290 unknown -0.353 0.183
123 254145_at AT4G24700 unknown -0.346 0.294
124 256098_at AT1G13700 PGL1, 6-phosphogluconolactonase 1 -0.343 0.209
125 248085_at AT5G55480 GDPDL4, Glycerophosphodiester phosphodiesterase (GDPD) like 4, GPDL1, glycerophosphodiesterase-like 1, SVL1, SHV3-like 1 -0.342 -0.055
126 261252_at AT1G05810 ARA, ARA-1, ATRAB11D, ATRABA5E, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E, RABA5E, RAB GTPase homolog A5E -0.338 -0.225
127 255403_at AT4G03400 DFL2, DWARF IN LIGHT 2, GH3-10 -0.335 -0.192
128 256396_at AT3G06150 unknown -0.333 -0.121
129 250972_at AT5G02840 LCL1, LHY/CCA1-like 1 -0.318 -0.096
130 254810_at AT4G12390 PME1, pectin methylesterase inhibitor 1 -0.312 0.007
131 257381_at AT2G37950 [RING/FYVE/PHD zinc finger superfamily protein] -0.311 0.003
132 260867_at AT1G43790 TED6, tracheary element differentiation-related 6 -0.307 -0.601
133 253270_at AT4G34160 CYCD3, CYCD3;1, CYCLIN D3;1 -0.305 -0.295
134 258535_at AT3G06750 [hydroxyproline-rich glycoprotein family protein] -0.305 -0.272
135 255694_at AT4G00050 UNE10, unfertilized embryo sac 10 -0.304 0.062
136 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 -0.303 -0.406
137 259958_at AT1G53730 SRF6, STRUBBELIG-receptor family 6 -0.294 -0.087
138 259358_at AT1G13250 GATL3, galacturonosyltransferase-like 3 -0.293 -0.427
139 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.291 -0.169
140 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.291 0.161
141 257288_at AT3G29670 PMAT2, phenolic glucoside malonyltransferase 2 -0.290 -0.035
142 255913_at AT1G66980 GDPDL2, Glycerophosphodiester phosphodiesterase (GDPD) like 2, SNC4, suppressor of npr1-1 constitutive 4 -0.290 -0.331
143 263122_at AT1G78510 AtSPS1, SPS1, solanesyl diphosphate synthase 1 -0.290 0.498
144 248759_at AT5G47610 [RING/U-box superfamily protein] -0.289 0.035
145 263788_at AT2G24580 [FAD-dependent oxidoreductase family protein] -0.282 -0.300
146 264379_at AT2G25200 unknown -0.280 -0.044
147 245616_at AT4G14480 [Protein kinase superfamily protein] -0.279 -0.633
148 259523_at AT1G12500 [Nucleotide-sugar transporter family protein] -0.279 -0.190
149 260696_at AT1G32520 unknown -0.279 0.222
150 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] -0.275 0.009
151 259858_at AT1G68400 [leucine-rich repeat transmembrane protein kinase family protein] -0.275 -0.308
152 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 -0.273 0.066
153 254448_at AT4G20870 ATFAH2, ARABIDOPSIS FATTY ACID HYDROXYLASE 2, FAH2, fatty acid hydroxylase 2 -0.272 -0.170
154 264573_at AT1G05310 [Pectin lyase-like superfamily protein] -0.271 -0.308
155 254787_at AT4G12690 unknown -0.266 -0.127
156 259021_at AT3G07540 [Actin-binding FH2 (formin homology 2) family protein] -0.265 -0.159
157 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.265 0.153
158 256262_at AT3G12150 unknown -0.264 -0.113
159 258472_at AT3G06080 TBL10, TRICHOME BIREFRINGENCE-LIKE 10 -0.262 -0.631
160 250696_at AT5G06790 unknown -0.262 -0.091
161 262456_at AT1G11260 ATSTP1, SUGAR TRANSPORTER 1, STP1, sugar transporter 1 -0.262 -0.359