4.0:Information of module
npr1
In comparison with aerial organ callus inducing medium 96 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0048438 floral whorl development BP 1.225e-03
GO:0048437 floral organ development BP 2.955e-03
GO:0048827 phyllome development BP 3.347e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010305 leaf vascular tissue pattern formation BP 3.278e-03
GO:0006643 membrane lipid metabolic process BP 3.905e-03
GO:0033554 cellular response to stress BP 6.275e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
npr1		 Log2 signal ratio
aerial organ callus inducing medium 96 h
1 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.154 0.060
2 265771_at AT2G48030 [DNAse I-like superfamily protein] 0.143 -0.051
3 251406_at AT3G60260 [ELMO/CED-12 family protein] 0.137 0.095
4 254304_at AT4G22270 ATMRB1, ARABIDOPSIS MEMBRANE RELATED BIGGER1, MRB1, MEMBRANE RELATED BIGGER1 0.118 0.082
5 246133_at AT5G20960 AAO1, aldehyde oxidase 1, AO1, aldehyde oxidase 1, AOalpha, aldehyde oxidase alpha, AT-AO1, ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1, ATAO, AtAO1, Arabidopsis thaliana aldehyde oxidase 1 0.110 -0.061
6 259151_at AT3G10310 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] 0.107 0.278
7 254562_at AT4G19230 CYP707A1, cytochrome P450, family 707, subfamily A, polypeptide 1 0.104 0.262
8 264455_at AT1G10330 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.102 -0.068
9 250196_at AT5G14580 [polyribonucleotide nucleotidyltransferase, putative] 0.096 0.246
10 254876_at AT4G11610 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.090 0.146
11 257899_at AT3G28345 ABCB15, ATP-binding cassette B15, MDR13, multi-drug resistance 13 0.090 -0.037
12 261727_at AT1G76090 SMT3, sterol methyltransferase 3 0.086 0.169
13 250092_at AT5G17360 unknown 0.081 -0.015
14 246789_at AT5G27600 ATLACS7, LACS7, long-chain acyl-CoA synthetase 7 0.077 0.107
15 254157_at AT4G24220 5[beta]-StR, Δ4,5-steroid-5[beta]-reductase, AWI31, VEP1, VEIN PATTERNING 1 0.077 0.152
16 255051_at AT4G09710 [non-LTR retrotransposon family (LINE), has a 4.7e-40 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] 0.076 -0.065
17 245254_at AT4G14680 APS3 -0.281 -0.106
18 261407_at AT1G18810 [phytochrome kinase substrate-related] -0.232 -0.893
19 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE -0.212 -0.557
20 245986_at AT5G13160 PBS1, avrPphB susceptible 1 -0.165 0.032
21 265726_at AT2G32010 CVL1, CVP2 like 1 -0.165 -0.418
22 253814_at AT4G28290 unknown -0.149 -0.282
23 247812_at AT5G58390 [Peroxidase superfamily protein] -0.141 -0.154
24 245676_at AT1G56670 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.135 -0.139
25 252411_at AT3G47430 PEX11B, peroxin 11B -0.131 -0.533
26 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 -0.130 -0.573
27 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 -0.128 -0.177
28 266529_at AT2G16880 [Pentatricopeptide repeat (PPR) superfamily protein] -0.123 -0.051
29 254885_at AT4G11745 [Galactose oxidase/kelch repeat superfamily protein] -0.123 -0.078
30 253510_at AT4G31730 GDU1, glutamine dumper 1 -0.120 -0.445
31 262780_at AT1G13090 CYP71B28, cytochrome P450, family 71, subfamily B, polypeptide 28 -0.119 -0.026