4.0:Information of module
Col-0 SA
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006914 autophagy BP 1.306e-03
GO:0010583 response to cyclopentenone BP 1.415e-03
GO:0010260 organ senescence BP 3.468e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009612 response to mechanical stimulus BP 4.345e-03
GO:0019722 calcium-mediated signaling BP 7.851e-03
GO:0019932 second-messenger-mediated signaling BP 1.519e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col-0 SA		 Log2 signal ratio
bri1-116
1 256593_at AT3G28510 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.566 0.082
2 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.543 -0.305
3 244966_at ATCG00600 PETG 0.443 0.010
4 266376_at AT2G14620 XTH10, xyloglucan endotransglucosylase/hydrolase 10 0.419 -0.069
5 264415_at AT1G43160 RAP2.6, related to AP2 6 0.385 0.030
6 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 0.327 0.098
7 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.274 -0.111
8 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.268 0.038
9 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.267 0.067
10 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.266 -0.199
11 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.257 -0.393
12 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 0.230 0.065
13 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.219 -0.243
14 267226_at AT2G44010 unknown 0.217 -0.127
15 267178_at AT2G37750 unknown 0.213 -0.137
16 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.212 -0.024
17 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 0.212 0.000
18 245076_at AT2G23170 GH3.3 0.206 0.019
19 250826_at AT5G05220 unknown 0.206 0.040
20 256024_at AT1G58340 BCD1, BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRZ, ZRIZI 0.203 0.112
21 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 0.199 -0.261
22 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] 0.198 -0.176
23 252300_at AT3G49160 [pyruvate kinase family protein] 0.194 -0.178
24 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.183 0.172
25 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.179 0.172
26 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.175 0.066
27 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.168 -0.231
28 265024_at AT1G24600 unknown 0.165 -0.057
29 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 0.163 0.156
30 259694_at AT1G63180 UGE3, UDP-D-glucose/UDP-D-galactose 4-epimerase 3 0.163 0.047
31 264758_at AT1G61340 AtFBS1, FBS1, F-box stress induced 1 0.162 -0.117
32 247913_at AT5G57510 unknown 0.162 -0.124
33 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 0.156 0.079
34 260560_at AT2G43590 [Chitinase family protein] -0.160 -0.010
35 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] -0.136 -0.197
36 267391_at AT2G44480 BGLU17, beta glucosidase 17 -0.132 0.074
37 248321_at AT5G52740 [Copper transport protein family] -0.129 -0.053
38 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.127 -0.348
39 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 -0.111 0.012
40 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 -0.107 0.066
41 259535_at AT1G12280 SUMM2, suppressor of mkk1 mkk2 2 -0.094 0.148
42 265405_at AT2G16750 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.092 0.137
43 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H -0.091 -0.185
44 250696_at AT5G06790 unknown -0.089 -0.111
45 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 -0.089 0.099
46 254371_at AT4G21760 BGLU47, beta-glucosidase 47 -0.084 0.048
47 252183_at AT3G50740 UGT72E1, UDP-glucosyl transferase 72E1 -0.080 0.061
48 248719_at AT5G47910 ATRBOHD, RBOHD, respiratory burst oxidase homologue D -0.077 -0.183
49 246269_at AT4G37110 [Zinc-finger domain of monoamine-oxidase A repressor R1] -0.076 0.132
50 248420_at AT5G51560 [Leucine-rich repeat protein kinase family protein] -0.075 0.086
51 267084_at AT2G41180 SIB2, sigma factor binding protein 2 -0.074 -0.094
52 246913_at AT5G25830 GATA12, GATA transcription factor 12 -0.073 -0.059
53 260220_at AT1G74650 ATMYB31, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31, ATY13, MYB31, myb domain protein 31 -0.072 -0.177
54 248271_at AT5G53420 [CCT motif family protein] -0.071 0.042
55 265545_at AT2G28250 NCRK -0.071 0.029
56 258828_at AT3G07130 ATPAP15, PURPLE ACID PHOSPHATASE 15, PAP15, purple acid phosphatase 15 -0.067 0.107
57 261548_at AT1G63480 AHL12, AT-hook motif nuclear localized protein 12 -0.067 0.109
58 250326_at AT5G12080 ATMSL10, MSL10, mechanosensitive channel of small conductance-like 10 -0.066 -0.022
59 247444_at AT5G62630 HIPL2, hipl2 protein precursor -0.065 -0.089
60 258315_at AT3G16175 [Thioesterase superfamily protein] -0.065 0.063
61 266089_at AT2G38010 [Neutral/alkaline non-lysosomal ceramidase] -0.065 -0.283
62 262286_at AT1G68585 unknown -0.065 0.577
63 261993_at AT1G33860 unknown -0.063 0.009
64 251844_at AT3G54630 unknown -0.061 -0.128
65 258720_at AT3G09550 [Ankyrin repeat family protein] -0.060 0.164
66 248948_at AT5G45560 [Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein] -0.059 -0.029