4.0:Information of module
brm-101
In comparison with mkk1/mkk2 control rep help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 6.476e-10
GO:0010363 regulation of plant-type hypersensitive ... BP 1.236e-08
GO:0045088 regulation of innate immune response BP 1.605e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0072511 divalent inorganic cation transport BP 4.484e-08
GO:0070838 divalent metal ion transport BP 1.479e-07
GO:0044281 small molecule metabolic process BP 1.853e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
brm-101		 Log2 signal ratio
mkk1/mkk2 control rep
1 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 0.957 0.883
2 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.868 0.985
3 254452_at AT4G21100 DDB1B, damaged DNA binding protein 1B 0.825 0.034
4 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 0.647 1.215
5 247717_at AT5G59320 LTP3, lipid transfer protein 3 0.604 -0.340
6 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.601 -0.347
7 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.590 0.737
8 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 0.574 0.966
9 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.567 0.507
10 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 0.562 -0.006
11 249895_at AT5G22500 FAR1, fatty acid reductase 1 0.540 0.029
12 260556_at AT2G43620 [Chitinase family protein] 0.495 0.559
13 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 0.458 0.986
14 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 0.426 -0.006
15 257798_at AT3G15950 NAI2 0.419 0.405
16 262705_at AT1G16260 [Wall-associated kinase family protein] 0.415 0.206
17 264635_at AT1G65500 unknown 0.405 0.737
18 247604_at AT5G60950 COBL5, COBRA-like protein 5 precursor 0.402 0.598
19 254490_at AT4G20320 [CTP synthase family protein] 0.386 0.138
20 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.370 0.531
21 255516_at AT4G02270 RHS13, root hair specific 13 0.366 -0.079
22 250942_at AT5G03350 [Legume lectin family protein] 0.365 0.338
23 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.353 0.692
24 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 0.347 -0.267
25 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.346 0.615
26 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.343 -0.068
27 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.334 0.261
28 262324_at AT1G64170 ATCHX16, cation/H+ exchanger 16, CHX16, cation/H+ exchanger 16 0.309 0.447
29 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 0.301 0.119
30 250059_at AT5G17820 [Peroxidase superfamily protein] 0.294 0.037
31 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 0.287 0.817
32 259885_at AT1G76380 [DNA-binding bromodomain-containing protein] 0.284 0.004
33 255110_at AT4G08770 Prx37, peroxidase 37 0.281 0.847
34 251933_at AT3G54060 unknown 0.276 -0.073
35 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 0.275 0.586
36 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.264 0.011
37 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.256 0.230
38 259841_at AT1G52200 [PLAC8 family protein] 0.254 0.712
39 247779_at AT5G58760 DDB2, damaged DNA binding 2 0.253 -0.109
40 266993_at AT2G39210 [Major facilitator superfamily protein] 0.251 0.556
41 257518_at AT3G03880 unknown 0.250 -0.043
42 259760_at AT1G77580 unknown 0.249 -0.373
43 247297_at AT5G64100 [Peroxidase superfamily protein] 0.244 0.113
44 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.243 -0.025
45 254451_at AT4G21090 ATMFDX2, ARABIDOPSIS MITOCHONDRIAL FERREDOXIN 2, MFDX2, MITOCHONDRIAL FERREDOXIN 2 0.242 -0.125
46 264287_at AT1G61930 unknown 0.238 -0.303
47 255904_at AT1G17860 [Kunitz family trypsin and protease inhibitor protein] 0.234 0.008
48 258209_at AT3G14060 unknown 0.233 0.834
49 257610_at AT3G13810 AtIDD11, indeterminate(ID)-domain 11, IDD11, indeterminate(ID)-domain 11 0.231 0.166
50 249675_at AT5G35940 [Mannose-binding lectin superfamily protein] 0.221 0.055
51 259692_at AT1G63080 [Pentatricopeptide repeat (PPR) superfamily protein] -0.650 -0.115
52 264195_at AT1G22690 [Gibberellin-regulated family protein] -0.501 -0.271
53 247878_at AT5G57760 unknown -0.385 -0.198
54 260012_at AT1G67865 unknown -0.377 -0.354
55 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.371 0.501
56 254773_at AT4G13410 ATCSLA15, CSLA15, CELLULOSE SYNTHASE LIKE A15 -0.366 -0.171
57 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.332 0.106
58 263108_at AT1G65240 [Eukaryotic aspartyl protease family protein] -0.322 0.159
59 261596_at AT1G33080 [MATE efflux family protein] -0.314 -0.159
60 245264_at AT4G17245 [RING/U-box superfamily protein] -0.304 0.201
61 249118_at AT5G43870 [FUNCTIONS IN: phosphoinositide binding] -0.299 -0.358
62 247162_at AT5G65730 XTH6, xyloglucan endotransglucosylase/hydrolase 6 -0.296 -0.323
63 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.278 -0.245
64 252989_at AT4G38420 sks9, SKU5 similar 9 -0.276 -0.271
65 260686_at AT1G17620 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.271 0.082
66 254122_at AT4G24510 CER2, ECERIFERUM 2, VC-2, VC2 -0.267 -0.173
67 255129_at AT4G08290 UMAMIT20, Usually multiple acids move in and out Transporters 20 -0.263 -0.111
68 252286_at AT3G49070 unknown -0.258 -0.072
69 253187_at AT4G35280 DAZ2, DUO1-ACTIVATED ZINC FINGER 2 -0.253 -0.057
70 254954_at AT4G10910 unknown -0.249 0.039
71 245304_at AT4G15630 [Uncharacterised protein family (UPF0497)] -0.247 -0.145
72 253165_at AT4G35320 unknown -0.245 -0.627
73 255549_at AT4G01950 ATGPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3, GPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3 -0.244 -0.224
74 265511_at AT2G05540 [Glycine-rich protein family] -0.242 0.130
75 253956_at AT4G26700 ATFIM1, ARABIDOPSIS THALIANA FIMBRIN 1, FIM1, fimbrin 1 -0.239 -0.290
76 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.237 -0.124
77 267279_at AT2G19460 unknown -0.235 -0.288
78 261727_at AT1G76090 SMT3, sterol methyltransferase 3 -0.235 0.135
79 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] -0.229 -0.055
80 256338_at AT1G72100 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.229 -0.033
81 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] -0.228 0.512
82 245690_at AT5G04230 ATPAL3, PAL3, phenyl alanine ammonia-lyase 3 -0.227 -0.203
83 256985_at AT3G13540 ATMYB5, myb domain protein 5, MYB5, myb domain protein 5 -0.226 -0.213
84 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.226 -0.145
85 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] -0.222 -0.023
86 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.222 -0.061
87 263492_at AT2G42560 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.221 -0.064
88 251882_at AT3G54140 AtNPF8.1, ATPTR1, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 1, NPF8.1, NRT1/ PTR family 8.1, PTR1, peptide transporter 1 -0.221 -0.091
89 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 -0.213 0.153
90 265722_at AT2G40100 LHCB4.3, light harvesting complex photosystem II -0.210 -0.279
91 261252_at AT1G05810 ARA, ARA-1, ATRAB11D, ATRABA5E, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E, RABA5E, RAB GTPase homolog A5E -0.209 -0.148
92 254002_at AT4G26280 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.207 -0.010
93 266516_at AT2G47880 [Glutaredoxin family protein] -0.206 -0.188
94 258131_at AT3G24540 AtPERK3, proline-rich extensin-like receptor kinase 3, PERK3, proline-rich extensin-like receptor kinase 3 -0.199 -0.020
95 251364_at AT3G61300 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.196 0.062
96 258060_at AT3G26030 ATB' DELTA, serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta -0.194 -0.154
97 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 -0.193 -0.229
98 266106_at AT2G45170 ATATG8E, AUTOPHAGY 8E, ATG8E, AUTOPHAGY 8E -0.192 0.243
99 250485_at AT5G09990 PROPEP5, elicitor peptide 5 precursor -0.192 -0.774