4.0:Information of module
tcp13
In comparison with Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0005983 starch catabolic process BP 9.879e-04
GO:0044237 cellular metabolic process BP 1.084e-03
GO:0009251 glucan catabolic process BP 1.756e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009860 pollen tube growth BP 2.614e-13
GO:0048868 pollen tube development BP 7.170e-13
GO:0009856 pollination BP 3.370e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
tcp13		 Log2 signal ratio
Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)
1 261850_at AT1G50470 [F-box associated ubiquitination effector family protein] 0.359 0.039
2 265916_at AT3G31920 [CACTA-like transposase family (Tnp2/En/Spm), has a 3.0e-163 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 0.255 0.226
3 254409_at AT4G21400 CRK28, cysteine-rich RLK (RECEPTOR-like protein kinase) 28 0.227 0.569
4 265248_at AT2G43010 AtPIF4, PIF4, phytochrome interacting factor 4, SRL2 0.182 0.283
5 250963_at AT5G03000 [Galactose oxidase/kelch repeat superfamily protein] 0.175 -0.160
6 256425_at AT1G33560 ADR1, ACTIVATED DISEASE RESISTANCE 1 0.155 1.350
7 265263_at AT2G42940 AHL16, AT-hook motif nuclear-localized protein 16, TEK, TRANSPOSABLE ELEMENT SILENCING VIA AT-HOOK 0.155 0.797
8 247290_at AT5G64450 unknown 0.154 -0.171
9 266751_at AT2G47020 [Peptide chain release factor 1] 0.147 -0.382
10 262570_at AT1G15200 [protein-protein interaction regulator family protein] 0.142 -0.468
11 246724_at AT5G29000 PHL1, PHR1-like 1 0.138 -0.682
12 246369_at AT1G51910 [Leucine-rich repeat protein kinase family protein] 0.135 -0.174
13 267029_at AT2G38460 ATIREG1, ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 1, FPN1, FERROPORTIN 1, IREG1, iron regulated 1 0.134 0.132
14 245575_at AT4G14760 NET1B, Networked 1B 0.131 0.622
15 262915_at AT1G59940 ARR3, response regulator 3 0.131 -0.656
16 263100_at AT2G05210 ATPOT1, AtPOT1a, Protection of Telomeres 1a 0.127 0.855
17 264594_at AT2G17640 ATSERAT3;1, SAT-106, SERINE ACETYLTRANSFERASE 106 0.126 1.195
18 250039_at AT5G18370 [Disease resistance protein (TIR-NBS-LRR class) family] 0.122 -0.477
19 253834_at AT4G27800 PPH1, PROTEIN PHOSPHATASE 1, TAP38, thylakoid-associated phosphatase 38 0.122 -0.157
20 247005_at AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 0.121 -0.785
21 252517_at AT3G46340 [Leucine-rich repeat protein kinase family protein] 0.117 -0.316
22 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.112 -0.479
23 259181_at AT3G01690 [alpha/beta-Hydrolases superfamily protein] 0.111 1.024
24 255070_at AT4G09020 ATISA3, ISA3, isoamylase 3 0.107 -0.125
25 249429_at AT5G39880 unknown -0.816 -0.498
26 257819_at AT3G25165 RALFL25, ralf-like 25 -0.800 -0.734
27 248470_at AT5G50830 unknown -0.788 -0.350
28 261528_at AT1G14420 AT59 -0.768 -0.810
29 246545_at AT5G15110 [Pectate lyase family protein] -0.743 -0.671
30 262022_at AT1G35490 [bZIP family transcription factor] -0.739 -0.891
31 251854_at AT3G54800 [Pleckstrin homology (PH) and lipid-binding START domains-containing protein] -0.731 -0.522
32 257886_at AT3G17060 [Pectin lyase-like superfamily protein] -0.723 -0.299
33 251180_at AT3G62640 unknown -0.715 -1.379
34 265368_at AT2G13350 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.691 -0.133
35 253831_at AT4G27580 unknown -0.688 -0.867
36 248714_at AT5G48140 [Pectin lyase-like superfamily protein] -0.672 -0.278
37 261623_at AT1G01980 [ATSEC1A] -0.644 -0.433
38 248194_at AT5G54095 unknown -0.629 -0.917
39 262664_at AT1G13970 unknown -0.612 0.249
40 250631_at AT5G07430 [Pectin lyase-like superfamily protein] -0.604 -0.574
41 257821_at AT3G25170 RALFL26, ralf-like 26 -0.590 0.268
42 266918_at AT2G45800 PLIM2a, PLIM2a -0.589 -0.770
43 262696_at AT1G75870 unknown -0.585 0.062
44 266029_at AT2G05850 scpl38, serine carboxypeptidase-like 38 -0.548 -0.159
45 257090_at AT3G20530 [Protein kinase superfamily protein] -0.547 0.096
46 247804_at AT5G58170 GDPDL7, Glycerophosphodiester phosphodiesterase (GDPD) like 7, SVL5, SHV3-like 5 -0.527 -0.235
47 263450_at AT2G31500 CPK24, calcium-dependent protein kinase 24 -0.523 -0.029