4.0:Information of module
myb61 cork
In comparison with Elevated CO2 leaf primordia help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.448e-24
GO:0010243 response to organonitrogen compound BP 5.312e-24
GO:1901698 response to nitrogen compound BP 1.641e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000302 response to reactive oxygen species BP 2.421e-05
GO:0050896 response to stimulus BP 2.494e-05
GO:1902582 single-organism intracellular transport BP 3.143e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
myb61 cork		 Log2 signal ratio
Elevated CO2 leaf primordia
1 253259_at AT4G34410 RRTF1, redox responsive transcription factor 1 0.993 0.020
2 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.754 -0.014
3 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.721 0.181
4 256009_at AT1G19210 [Integrase-type DNA-binding superfamily protein] 0.642 -0.032
5 262211_at AT1G74930 ORA47 0.615 -0.022
6 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.520 -0.011
7 253643_at AT4G29780 unknown 0.517 -0.023
8 253859_at AT4G27657 unknown 0.514 -0.070
9 256633_at AT3G28340 GATL10, galacturonosyltransferase-like 10, GolS8, galactinol synthase 8 0.432 -0.036
10 247789_at AT5G58680 [ARM repeat superfamily protein] 0.421 -0.029
11 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 0.407 -0.022
12 266316_at AT2G27080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.404 0.018
13 264704_at AT1G70090 GATL9, GALACTURONOSYLTRANSFERASE-LIKE 9, LGT8, glucosyl transferase family 8 0.399 0.023
14 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.397 0.070
15 256442_at AT3G10930 unknown 0.393 -0.003
16 251192_at AT3G62720 ATXT1, XT1, xylosyltransferase 1, XXT1, XYG XYLOSYLTRANSFERASE 1 0.385 -0.009
17 254075_at AT4G25470 ATCBF2, CBF2, C-repeat/DRE binding factor 2, DREB1C, DRE/CRT-BINDING PROTEIN 1C, FTQ4, FREEZING TOLERANCE QTL 4 0.381 -0.012
18 260227_at AT1G74450 unknown 0.378 -0.030
19 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] 0.376 -0.004
20 259879_at AT1G76650 CML38, calmodulin-like 38 0.374 0.018
21 250098_at AT5G17350 unknown 0.373 -0.007
22 260135_at AT1G66400 CML23, calmodulin like 23 0.370 -0.002
23 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.363 0.000
24 258792_at AT3G04640 [glycine-rich protein] 0.355 0.038
25 251336_at AT3G61190 BAP1, BON association protein 1 0.354 0.061
26 254770_at AT4G13340 LRX3, leucine-rich repeat/extensin 3 0.339 0.013
27 261684_at AT1G47400 unknown 0.337 0.139
28 247848_at AT5G58120 [Disease resistance protein (TIR-NBS-LRR class) family] 0.319 -0.073
29 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.315 -0.022
30 261405_at AT1G18740 unknown 0.312 -0.028
31 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.309 0.069
32 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.302 -0.046
33 246550_at AT5G14920 GASA14, A-stimulated in Arabidopsis 14 0.295 -0.015
34 259729_at AT1G77640 [Integrase-type DNA-binding superfamily protein] 0.291 0.021
35 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.280 -0.036
36 250110_at AT5G15350 AtENODL17, ENODL17, early nodulin-like protein 17 0.279 0.004
37 265732_at AT2G01300 unknown 0.278 -0.005
38 267515_at AT2G45680 TCP9, TCP domain protein 9 0.268 -0.000
39 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.260 0.145
40 253832_at AT4G27654 unknown 0.259 -0.029
41 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.258 -0.011
42 252193_at AT3G50060 MYB77, myb domain protein 77 0.255 0.007
43 250676_at AT5G06320 NHL3, NDR1/HIN1-like 3 0.249 -0.003
44 247279_at AT5G64310 AGP1, arabinogalactan protein 1, ATAGP1 0.247 0.012
45 247708_at AT5G59550 unknown 0.245 -0.016
46 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 0.243 -0.026
47 259979_at AT1G76600 unknown 0.239 0.032
48 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.236 0.021
49 254042_at AT4G25810 XTH23, xyloglucan endotransglucosylase/hydrolase 23, XTR6, xyloglucan endotransglycosylase 6 0.226 -0.045
50 259871_at AT1G76800 [Vacuolar iron transporter (VIT) family protein] 0.226 -0.027
51 255733_at AT1G25400 unknown 0.225 -0.021
52 252474_at AT3G46620 unknown 0.224 -0.019
53 263931_at AT2G36220 unknown 0.218 -0.059
54 259105_at AT3G05500 [Rubber elongation factor protein (REF)] 0.217 0.010
55 246584_at AT5G14730 unknown 0.212 0.001
56 251640_at AT3G57450 unknown 0.207 0.006
57 253830_at AT4G27652 unknown 0.206 -0.041
58 266037_at AT2G05940 RIPK, RPM1-induced protein kinase 0.205 0.009
59 260367_at AT1G69760 unknown 0.201 0.026
60 247240_at AT5G64660 ATCMPG2, CMPG2, CYS, MET, PRO, and GLY protein 2 0.200 -0.017
61 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.200 0.003
62 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.199 -0.041
63 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.198 0.032
64 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.196 0.029
65 251366_at AT3G61340 [F-box and associated interaction domains-containing protein] 0.196 -0.033
66 262225_at AT1G53840 ATPME1, pectin methylesterase 1, PME1, pectin methylesterase 1 0.195 -0.021
67 260686_at AT1G17620 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.194 -0.017
68 249583_at AT5G37770 CML24, CALMODULIN-LIKE 24, TCH2, TOUCH 2 0.192 -0.002
69 260075_at AT1G73700 [MATE efflux family protein] 0.189 -0.063
70 261115_at AT1G75360 unknown 0.187 0.015
71 248847_at AT5G46510 VICTL, VARIATION IN COMPOUND TRIGGERED ROOT growth response-like 0.186 0.047
72 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.184 0.026
73 259802_at AT1G72260 THI2.1, thionin 2.1, THI2.1.1 0.181 0.056
74 256093_at AT1G20823 [RING/U-box superfamily protein] 0.180 -0.015
75 267069_at AT2G41010 ATCAMBP25, calmodulin (CAM)-binding protein of 25 kDa, CAMBP25, calmodulin (CAM)-binding protein of 25 kDa 0.179 -0.028
76 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.176 0.018
77 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 0.175 0.022
78 247191_at AT5G65310 ATHB-5, ATHB5, homeobox protein 5, HB5, homeobox protein 5 0.174 0.000
79 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.170 -0.004
80 246388_at AT1G77405 [Pentatricopeptide repeat (PPR) superfamily protein] 0.170 -0.015
81 262312_at AT1G70830 MLP28, MLP-like protein 28 0.165 -0.029
82 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 0.163 -0.023
83 260211_at AT1G74440 unknown 0.162 0.016
84 261193_at AT1G32920 unknown 0.160 0.002
85 253925_at AT4G26690 GDPDL3, Glycerophosphodiester phosphodiesterase (GDPD) like 3, GPDL2, GLYCEROPHOSPHODIESTERASE-LIKE 2, MRH5, MUTANT ROOT HAIR 5, SHV3, SHAVEN 3 0.158 -0.024
86 256361_at AT1G66520 pde194, pigment defective 194 0.158 0.036
87 263613_at AT2G25250 unknown 0.156 -0.029
88 250018_at AT5G18150 [Methyltransferase-related protein] 0.156 -0.014
89 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.155 0.038
90 253638_at AT4G30470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.151 -0.044
91 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.148 0.007
92 246253_at AT4G37260 ATMYB73, MYB73, myb domain protein 73 0.144 -0.003
93 254845_at AT4G11820 FKP1, FLAKY POLLEN 1, HMGS, HYDROXYMETHYLGLUTARYL-COA SYNTHASE, MVA1 0.144 0.007
94 263179_at AT1G05710 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.143 0.003
95 263292_at AT2G10900 [expressed protein] -0.505 0.047
96 257323_at ATMG01200 ORF294 -0.500 0.006
97 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 -0.404 0.015
98 245627_at AT1G56600 AtGolS2, galactinol synthase 2, GolS2, galactinol synthase 2 -0.354 -0.002
99 259766_at AT1G64360 unknown -0.349 -0.078
100 262719_at AT1G43590 unknown -0.303 -0.016
101 258979_at AT3G09440 [Heat shock protein 70 (Hsp 70) family protein] -0.292 0.001
102 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.289 0.023
103 253657_at AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 -0.285 0.001
104 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.278 0.005
105 260149_at AT1G52810 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.276 -0.012
106 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.275 0.158
107 262656_at AT1G14200 [RING/U-box superfamily protein] -0.260 -0.020
108 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase -0.259 -0.034
109 261221_at AT1G19960 unknown -0.250 -0.062
110 249010_at AT5G44580 unknown -0.243 -0.065
111 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.216 0.004
112 251196_at AT3G62950 [Thioredoxin superfamily protein] -0.216 -0.015
113 259235_at AT3G11600 unknown -0.212 -0.030
114 245096_at AT2G40880 ATCYSA, cystatin A, CYSA, cystatin A, FL3-27 -0.209 -0.029
115 261265_at AT1G26800 [RING/U-box superfamily protein] -0.207 -0.017
116 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] -0.206 0.034
117 246222_at AT4G36900 DEAR4, DREB AND EAR MOTIF PROTEIN 4, RAP2.10, related to AP2 10 -0.206 -0.014
118 251652_at AT3G57380 [Glycosyltransferase family 61 protein] -0.203 -0.005
119 251039_at AT5G02020 SIS, Salt Induced Serine rich -0.199 -0.071
120 244983_at ATCG00790 RPL16, ribosomal protein L16 -0.193 -0.010
121 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 -0.193 0.009
122 260005_at AT1G67920 unknown -0.192 0.115
123 263788_at AT2G24580 [FAD-dependent oxidoreductase family protein] -0.192 -0.019
124 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 -0.189 -0.049
125 245004_at ATCG00300 YCF9 -0.188 -0.011
126 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 -0.188 0.012
127 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] -0.184 0.027
128 245345_at AT4G16640 [Matrixin family protein] -0.184 -0.018
129 244981_at ATCG00770 RPS8, ribosomal protein S8 -0.181 -0.017
130 252068_at AT3G51440 [Calcium-dependent phosphotriesterase superfamily protein] -0.180 -0.053
131 266717_at AT2G46735 unknown -0.179 -0.012
132 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.177 0.043
133 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.176 0.062
134 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.175 0.034
135 259831_at AT1G69600 ATHB29, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 29, ZFHD1, zinc finger homeodomain 1, ZHD11, ZINC FINGER HOMEODOMAIN 11 -0.174 -0.017
136 260264_at AT1G68500 unknown -0.173 -0.007
137 257333_at ATMG01360 COX1, cytochrome oxidase -0.173 -0.024
138 261567_at AT1G33055 unknown -0.171 0.085
139 257946_at AT3G21710 unknown -0.171 -0.015
140 258245_at AT3G29075 [glycine-rich protein] -0.169 -0.019
141 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] -0.169 -0.008
142 261075_at AT1G07280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.166 -0.015
143 267279_at AT2G19460 unknown -0.166 -0.024
144 255345_at AT4G04460 [Saposin-like aspartyl protease family protein] -0.166 0.012
145 245353_at AT4G16000 unknown -0.161 0.047
146 260332_at AT1G70470 unknown -0.160 0.010
147 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.160 0.024
148 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.159 0.036
149 248888_at AT5G46240 AtKAT1, KAT1, potassium channel in Arabidopsis thaliana 1 -0.155 -0.034
150 246946_at AT5G25070 unknown -0.154 -0.012
151 253567_at AT4G31230 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.153 0.001
152 254361_at AT4G22212 [Arabidopsis defensin-like protein] -0.153 0.020
153 256824_at AT3G22121 other RNA -0.153 -0.021
154 255807_at AT4G10270 [Wound-responsive family protein] -0.153 0.042
155 250103_at AT5G16600 AtMYB43, myb domain protein 43, MYB43, myb domain protein 43 -0.153 0.001
156 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 -0.151 0.033
157 261073_at AT1G07300 [josephin protein-related] -0.150 -0.020
158 261020_at AT1G26390 [FAD-binding Berberine family protein] -0.149 -0.026
159 263603_at AT2G16340 unknown -0.148 -0.039
160 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 -0.148 0.143
161 248564_at AT5G49700 AHL17, AT-hook motif nuclear localized protein 17 -0.147 0.006
162 245953_at AT5G28520 [Mannose-binding lectin superfamily protein] -0.147 0.005
163 253829_at AT4G28040 UMAMIT33, Usually multiple acids move in and out Transporters 33 -0.147 -0.033
164 247051_at AT5G66670 unknown -0.145 -0.014
165 265769_at AT2G48090 unknown -0.145 0.033
166 258336_at AT3G16050 A37, ATPDX1.2, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, PDX1.2, pyridoxine biosynthesis 1.2 -0.143 -0.018
167 247072_at AT5G66490 unknown -0.142 -0.046
168 245330_at AT4G14930 [Survival protein SurE-like phosphatase/nucleotidase] -0.141 -0.004
169 262602_at AT1G15270 [Translation machinery associated TMA7] -0.139 -0.020
170 254500_at AT4G20110 BP80-3;1, binding protein of 80 kDa 3;1, VSR3;1, VACUOLAR SORTING RECEPTOR 3;1, VSR7, VACUOLAR SORTING RECEPTOR 7 -0.138 0.063
171 262151_at AT1G52510 [alpha/beta-Hydrolases superfamily protein] -0.136 -0.013
172 258262_at AT3G15770 unknown -0.135 -0.039
173 252198_x_at AT3G50250 unknown -0.135 -0.017
174 257846_at AT3G12910 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] -0.135 0.048
175 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 -0.133 0.046
176 258184_at AT3G21510 AHP1, histidine-containing phosphotransmitter 1 -0.133 0.025
177 245807_at AT1G46768 RAP2.1, related to AP2 1 -0.133 -0.009
178 248969_at AT5G45310 unknown -0.133 -0.048
179 264621_at AT2G17700 STY8, serine/threonine/tyrosine kinase 8 -0.133 0.006
180 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.133 0.002
181 258975_at AT3G01970 ATWRKY45, WRKY DNA-BINDING PROTEIN 45, WRKY45, WRKY DNA-binding protein 45 -0.132 -0.097
182 262548_at AT1G31280 AGO2, argonaute 2, AtAGO2 -0.131 -0.004
183 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.131 0.069
184 249995_at AT5G18610 [Protein kinase superfamily protein] -0.131 0.006
185 256569_at AT3G19550 unknown -0.130 -0.024
186 251531_at AT3G58550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.129 -0.076
187 253432_at AT4G32450 MEF8S, MEF8 similar -0.129 -0.011