4.0:Information of module
ACN1-2
In comparison with cat2-2; 8h switch to ambient CO2 concentrations; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044763 single-organism cellular process BP 1.292e-08
GO:0042440 pigment metabolic process BP 3.342e-07
GO:0009987 cellular process BP 9.844e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0072329 monocarboxylic acid catabolic process BP 8.104e-10
GO:0009062 fatty acid catabolic process BP 2.741e-09
GO:0019395 fatty acid oxidation BP 7.276e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ACN1-2		 Log2 signal ratio
cat2-2; 8h switch to ambient CO2 concentrations;
1 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.400 0.007
2 252618_at AT3G45140 ATLOX2, ARABIODOPSIS THALIANA LIPOXYGENASE 2, LOX2, lipoxygenase 2 0.172 0.009
3 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.158 0.152
4 259573_at AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 0.139 -0.003
5 255836_at AT2G33440 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.136 0.153
6 245855_at AT5G13550 SULTR4;1, sulfate transporter 4.1 0.129 0.072
7 249225_at AT5G42140 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.120 0.094
8 247212_at AT5G65040 unknown 0.118 -0.069
9 266410_at AT2G38770 EMB2765, EMBRYO DEFECTIVE 2765 0.115 0.053
10 259597_at AT1G27900 [RNA helicase family protein] 0.114 0.060
11 262134_at AT1G77990 AST56, SULTR2;2, SULPHATE TRANSPORTER 2;2 0.113 -0.009
12 258043_at AT3G21290 [dentin sialophosphoprotein-related] 0.109 0.073
13 259190_at AT3G01780 TPLATE 0.102 0.037
14 245774_at AT1G30210 ATTCP24, TCP24, TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 0.102 -0.028
15 254707_at AT4G18010 5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, AT5PTASE2, myo-inositol polyphosphate 5-phosphatase 2, IP5PII, INOSITOL(1,4,5)P3 5-PHOSPHATASE II 0.101 0.104
16 245256_at AT4G15090 FAR1, FAR-RED IMPAIRED RESPONSE 1 0.100 0.094
17 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.100 0.101
18 263448_at AT2G31660 EMA1, enhanced miRNA activity 1, SAD2, SUPER SENSITIVE TO ABA AND DROUGHT2, URM9, UNARMED 9 0.099 -0.035
19 266431_at AT2G07230 [Mutator-like transposase family, has a 8.1e-59 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.099 -0.080
20 258566_at AT3G04110 ATGLR1.1, GLR1, GLUTAMATE RECEPTOR 1, GLR1.1, glutamate receptor 1.1 0.098 0.105
21 246233_at AT4G36550 [ARM repeat superfamily protein] 0.098 0.000
22 260979_at AT1G53510 ATMPK18, ARABIDOPSIS THALIANA MAP KINASE 18, MPK18, mitogen-activated protein kinase 18 0.096 0.038
23 256857_at AT3G15170 ANAC054, Arabidopsis NAC domain containing protein 54, ATNAC1, CUC1, CUP-SHAPED COTYLEDON1 0.096 -0.046
24 264858_at AT1G24190 ATSIN3, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SIN3, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SNL3, SIN3-like 3 0.096 0.165
25 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.095 0.117
26 264084_at AT2G31240 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.094 0.066
27 256611_at AT3G29270 [RING/U-box superfamily protein] 0.092 -0.020
28 249860_at AT5G22860 [Serine carboxypeptidase S28 family protein] 0.091 0.162
29 253649_at AT4G29790 unknown 0.090 0.062
30 247755_at AT5G59090 ATSBT4.12, subtilase 4.12, SBT4.12, subtilase 4.12 0.089 -0.011
31 258844_at AT3G04740 ATMED14, ARABIDOPSIS MEDIATOR COMPONENTS 14, MED14, MEDIATOR COMPONENTS 14, SWP, STRUWWELPETER 0.088 0.033
32 247659_at AT5G60040 NRPC1, nuclear RNA polymerase C1 0.088 0.035
33 257062_at AT3G18290 BTS, BRUTUS, EMB2454, embryo defective 2454 0.087 0.099
34 251722_at AT3G56200 [Transmembrane amino acid transporter family protein] 0.086 0.023
35 260126_at AT1G36370 SHM7, serine hydroxymethyltransferase 7 0.086 0.061
36 262936_at AT1G79400 ATCHX2, cation/H+ exchanger 2, CHX2, cation/H+ exchanger 2 0.086 -0.009
37 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 0.085 0.091
38 265191_at AT1G05120 [Helicase protein with RING/U-box domain] 0.085 0.075
39 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] 0.085 0.039
40 259175_at AT3G01560 unknown 0.085 -0.080
41 245456_at AT4G16950 RPP5, RECOGNITION OF PERONOSPORA PARASITICA 5 0.083 0.070
42 246411_at AT1G57770 [FAD/NAD(P)-binding oxidoreductase family protein] 0.080 -0.056
43 250711_at AT5G06110 [DnaJ domain ] 0.080 0.069
44 263804_at AT2G40270 [Protein kinase family protein] 0.078 0.056
45 249546_at AT5G38150 PMI15, plastid movement impaired 15 0.078 0.028
46 247304_at AT5G63850 AAP4, amino acid permease 4 0.078 0.011
47 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 0.076 -0.127
48 266503_at AT2G47780 [Rubber elongation factor protein (REF)] -0.825 -0.125
49 258224_at AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] -0.796 -0.020
50 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 -0.779 0.357
51 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] -0.756 0.248
52 247061_at AT5G66780 unknown -0.754 0.025
53 266544_at AT2G35300 AtLEA4-2, late embryogenesis abundant 4-2, LEA18, late embryogenesis abundant 18, LEA4-2, late embryogenesis abundant 4-2 -0.694 -0.014
54 264612_at AT1G04560 [AWPM-19-like family protein] -0.669 0.005
55 258347_at AT3G17520 [Late embryogenesis abundant protein (LEA) family protein] -0.631 0.092
56 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.591 0.044
57 250868_at AT5G03860 MLS, malate synthase -0.554 -0.031
58 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 -0.490 -0.053
59 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 -0.470 0.151
60 266393_at AT2G41260 ATM17, M17 -0.449 -0.021
61 251838_at AT3G54940 [Papain family cysteine protease] -0.449 0.021
62 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 -0.421 -0.082
63 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 -0.404 0.059
64 256354_at AT1G54870 [NAD(P)-binding Rossmann-fold superfamily protein] -0.355 -0.025
65 247437_at AT5G62490 ATHVA22B, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B, HVA22B, HVA22 homologue B -0.347 0.014
66 257947_at AT3G21720 ICL, isocitrate lyase -0.331 0.015
67 257571_at AT3G16870 GATA17, GATA transcription factor 17 -0.295 -0.087
68 259167_at AT3G01570 [Oleosin family protein] -0.290 -0.054
69 260859_at AT1G43780 scpl44, serine carboxypeptidase-like 44 -0.289 -0.047
70 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 -0.286 0.009
71 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 -0.280 -0.033
72 263753_at AT2G21490 LEA, dehydrin LEA -0.278 -0.040
73 250624_at AT5G07330 unknown -0.260 -0.019
74 245193_at AT1G67810 SUFE2, sulfur E2 -0.252 0.322
75 246242_at AT4G36600 [Late embryogenesis abundant (LEA) protein] -0.246 0.002
76 267472_at AT2G02850 ARPN, plantacyanin -0.238 -0.050
77 256340_at AT1G72070 [Chaperone DnaJ-domain superfamily protein] -0.236 0.028
78 260668_at AT1G19530 unknown -0.232 -0.149
79 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related -0.227 0.134
80 266384_at AT2G14660 unknown -0.222 -0.090
81 251065_at AT5G01870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.219 -0.044
82 254440_at AT4G21020 [Late embryogenesis abundant protein (LEA) family protein] -0.215 -0.040
83 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.206 0.020
84 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A -0.203 0.262
85 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 -0.199 0.912
86 262373_at AT1G73120 unknown -0.199 -0.018
87 263881_at AT2G21820 unknown -0.196 0.006
88 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.196 0.081
89 250780_at AT5G05290 ATEXP2, ATEXPA2, expansin A2, ATHEXP ALPHA 1.12, EXP2, EXPANSIN 2, EXPA2, expansin A2 -0.191 -0.010
90 256338_at AT1G72100 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] -0.184 -0.051
91 245196_at AT1G67750 [Pectate lyase family protein] -0.178 -0.083
92 247456_at AT5G62160 AtZIP12, zinc transporter 12 precursor, ZIP12, zinc transporter 12 precursor -0.177 0.010
93 257880_at AT3G16910 AAE7, acyl-activating enzyme 7, ACN1, ACETATE NON-UTILIZING 1 -0.177 -0.029