4.0:Information of module
sfr6 drought
In comparison with Elevated CO2 AMPLE N NIGHT help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042254 ribosome biogenesis BP 7.218e-08
GO:0022613 ribonucleoprotein complex biogenesis BP 9.360e-08
GO:0006412 translation BP 1.102e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 7.717e-12
GO:0010243 response to organonitrogen compound BP 2.445e-11
GO:0009719 response to endogenous stimulus BP 7.741e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sfr6 drought		 Log2 signal ratio
Elevated CO2 AMPLE N NIGHT
1 247607_at AT5G60960 PNM1, PPR protein localized to the nucleus and mitochondria 1 0.143 -0.020
2 267637_at AT2G42190 unknown 0.116 -0.051
3 251476_at AT3G59670 unknown 0.113 -0.018
4 251538_at AT3G58660 [Ribosomal protein L1p/L10e family] 0.111 0.008
5 251418_at AT3G60440 [Phosphoglycerate mutase family protein] 0.109 0.003
6 246483_at AT5G16000 AtNIK1, NIK1, NSP-interacting kinase 1 0.106 -0.075
7 262543_at AT1G34245 EPF2, EPIDERMAL PATTERNING FACTOR 2 0.105 -0.035
8 263192_at AT1G36160 ACC1, acetyl-CoA carboxylase 1, AT-ACC1, EMB22, EMBRYO DEFECTIVE 22, GK, GURKE, GSD1, GLOSSYHEAD 1, PAS3, PASTICCINO 3, SFR3, SENSITIVE TO FREEZING 3 0.101 -0.046
9 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 0.100 -0.022
10 265960_at AT2G37470 [Histone superfamily protein] 0.100 -0.086
11 265886_at AT2G25620 AtDBP1, DNA-binding protein phosphatase 1, DBP1, DNA-binding protein phosphatase 1 0.094 0.001
12 257571_at AT3G16870 GATA17, GATA transcription factor 17 0.092 0.035
13 257730_at AT3G18420 [Protein prenylyltransferase superfamily protein] 0.092 -0.013
14 254515_at AT4G20270 BAM3, BARELY ANY MERISTEM 3 0.086 -0.063
15 253817_at AT4G28310 unknown 0.085 0.008
16 253598_at AT4G30800 [Nucleic acid-binding, OB-fold-like protein] 0.084 -0.076
17 252496_at AT3G46790 CRR2, CHLORORESPIRATORY REDUCTION 2 0.083 -0.019
18 249129_at AT5G43080 CYCA3;1, Cyclin A3;1 0.083 -0.036
19 253065_at AT4G37740 AtGRF2, growth-regulating factor 2, GRF2, growth-regulating factor 2 0.081 -0.052
20 255675_at AT4G00480 ATMYC1, myc1 0.080 -0.035
21 248094_at AT5G55220 [trigger factor type chaperone family protein] 0.077 -0.068
22 263236_at AT1G10470 ARR4, response regulator 4, ATRR1, RESPONCE REGULATOR 1, IBC7, INDUCED BY CYTOKININ 7, MEE7, maternal effect embryo arrest 7 0.077 0.020
23 266959_at AT2G07690 MCM5, MINICHROMOSOME MAINTENANCE 5 0.076 0.040
24 266916_at AT2G45860 unknown 0.075 -0.055
25 267307_at AT2G30210 LAC3, laccase 3 0.074 0.012
26 257660_at AT3G13360 WIP3, WPP domain interacting protein 3 0.073 -0.007
27 250434_at AT5G10390 H3.1, histone 3.1 0.072 0.014
28 265522_at AT2G06210 ELF8, EARLY FLOWERING 8, VIP6, VERNALIZATION INDEPENDENCE 6 0.072 -0.049
29 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 0.072 -0.035
30 250484_at AT5G10240 ASN3, asparagine synthetase 3 0.070 -0.047
31 258554_at AT3G06980 [DEA(D/H)-box RNA helicase family protein] 0.069 -0.103
32 248066_at AT5G55590 QRT1, QUARTET 1 0.066 -0.061
33 260318_at AT1G63960 [Copper transport protein family] 0.065 0.040
34 259735_at AT1G64405 unknown 0.065 0.092
35 266980_at AT2G39390 [Ribosomal L29 family protein ] 0.065 -0.017
36 261381_at AT1G05460 SDE3, SILENCING DEFECTIVE 0.064 -0.063
37 247900_at AT5G57290 [60S acidic ribosomal protein family] 0.064 -0.008
38 261130_at AT1G04870 ATPRMT10, PRMT10, protein arginine methyltransferase 10 0.063 -0.017
39 256666_at AT3G20670 HTA13, histone H2A 13 0.063 -0.043
40 257295_at AT3G17420 GPK1, glyoxysomal protein kinase 1 0.062 0.127
41 258884_at AT3G10050 OMR1, L-O-methylthreonine resistant 1 0.062 -0.054
42 257609_at AT3G13845 unknown 0.062 -0.041
43 247556_at AT5G61040 unknown 0.061 -0.045
44 257354_x_at AT2G23480 unknown 0.060 -0.075
45 248937_at AT5G45770 AtRLP55, receptor like protein 55, RLP55, receptor like protein 55 -0.389 -0.027
46 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b -0.231 0.209
47 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.196 -0.027
48 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 -0.194 0.084
49 264580_at AT1G05340 unknown -0.182 0.366
50 245119_at AT2G41640 [Glycosyltransferase family 61 protein] -0.181 0.020
51 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.179 0.194
52 245252_at AT4G17500 ATERF-1, ethylene responsive element binding factor 1, ERF-1, ethylene responsive element binding factor 1 -0.173 0.106
53 255177_at AT4G08040 ACS11, 1-aminocyclopropane-1-carboxylate synthase 11 -0.173 0.013
54 265387_at AT2G20670 unknown -0.157 -0.033
55 259143_at AT3G10190 [Calcium-binding EF-hand family protein] -0.145 0.050
56 252193_at AT3G50060 MYB77, myb domain protein 77 -0.142 0.078
57 247543_at AT5G61600 ERF104, ethylene response factor 104 -0.137 0.075
58 261567_at AT1G33055 unknown -0.134 0.058
59 254571_at AT4G19370 unknown -0.131 0.186
60 263890_at AT2G37030 SAUR46, SMALL AUXIN UPREGULATED RNA 46 -0.130 -0.025
61 248870_at AT5G46710 [PLATZ transcription factor family protein] -0.126 0.058
62 255733_at AT1G25400 unknown -0.125 0.062
63 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 -0.121 0.185
64 253908_at AT4G27260 GH3.5, WES1 -0.121 0.002
65 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.120 0.023
66 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 -0.119 0.031
67 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 -0.117 0.042
68 258436_at AT3G16720 ATL2, TOXICOS EN LEVADURA 2, TL2, TOXICOS EN LEVADURA 2 -0.113 0.102
69 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.112 0.167
70 252250_at AT3G49790 [Carbohydrate-binding protein] -0.112 0.009
71 255243_at AT4G05590 unknown -0.111 0.104
72 252483_at AT3G46600 [GRAS family transcription factor] -0.110 0.022
73 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.110 0.070
74 263565_at AT2G15390 atfut4, FUT4, fucosyltransferase 4 -0.109 0.150
75 249234_at AT5G42200 [RING/U-box superfamily protein] -0.106 -0.061
76 249140_at AT5G43190 [Galactose oxidase/kelch repeat superfamily protein] -0.105 0.018
77 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] -0.104 -0.053
78 264652_at AT1G08920 ESL1, ERD (early response to dehydration) six-like 1 -0.101 -0.052
79 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.099 0.009
80 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.099 0.130
81 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C -0.099 -0.037
82 267381_at AT2G26190 [calmodulin-binding family protein] -0.097 0.067
83 252053_at AT3G52400 ATSYP122, SYP122, syntaxin of plants 122 -0.094 0.202
84 248395_at AT5G52120 AtPP2-A14, phloem protein 2-A14, PP2-A14, phloem protein 2-A14 -0.094 0.002
85 253747_at AT4G29050 LecRK-V.9, L-type lectin receptor kinase V.9 -0.094 0.003
86 259479_at AT1G19020 unknown -0.093 0.263
87 262801_at AT1G21010 unknown -0.092 0.031