4.0:Information of module
sfr2 control
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006839 mitochondrial transport BP 2.175e-03
GO:0098660 inorganic ion transmembrane transport BP 7.852e-03
GO:0006352 DNA-templated transcription, initiation BP 8.361e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009308 amine metabolic process BP 1.707e-03
GO:0010087 phloem or xylem histogenesis BP 3.139e-03
GO:0016310 phosphorylation BP 7.652e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sfr2 control		 Log2 signal ratio
bri1-116
1 254700_at AT4G18000 unknown 0.353 0.023
2 267560_at AT2G45580 CYP76C3, cytochrome P450, family 76, subfamily C, polypeptide 3 0.191 0.048
3 259116_at AT3G01350 [Major facilitator superfamily protein] 0.175 -0.022
4 254629_at AT4G18425 unknown 0.174 -0.494
5 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 0.141 0.302
6 247467_at AT5G62130 [Per1-like family protein] 0.119 0.099
7 263545_at AT2G21560 unknown 0.115 0.125
8 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 0.108 0.420
9 252411_at AT3G47430 PEX11B, peroxin 11B 0.107 0.113
10 253835_at AT4G27820 BGLU9, beta glucosidase 9 0.105 0.084
11 256673_at AT3G52370 FLA15, FASCICLIN-like arabinogalactan protein 15 precursor 0.101 -0.409
12 248753_at AT5G47630 mtACP3, mitochondrial acyl carrier protein 3 0.100 0.095
13 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 0.100 0.082
14 250099_at AT5G17300 RVE1, REVEILLE 1 0.100 0.034
15 258460_at AT3G17330 ECT6, evolutionarily conserved C-terminal region 6 0.098 -0.015
16 251360_at AT3G61210 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.096 0.320
17 253814_at AT4G28290 unknown 0.092 0.012
18 245682_at AT5G08750 [RING/FYVE/PHD zinc finger superfamily protein] 0.091 0.019
19 263782_at AT2G46380 unknown 0.089 0.040
20 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 0.085 0.278
21 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 0.085 0.013
22 250036_at AT5G18340 [ARM repeat superfamily protein] 0.085 -0.010
23 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.084 0.094
24 260002_at AT1G67940 ABCI17, ATP-binding cassette I17, ATNAP3, non-intrinsic ABC protein 3, AtSTAR1, NAP3, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3, NAP3, non-intrinsic ABC protein 3 0.084 -0.188
25 245800_at AT1G46264 AT-HSFB4, HSFB4, heat shock transcription factor B4, SCZ, SCHIZORIZA 0.083 0.384
26 265699_at AT2G03550 [alpha/beta-Hydrolases superfamily protein] 0.083 0.149
27 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.083 0.062
28 248271_at AT5G53420 [CCT motif family protein] 0.080 0.042
29 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 0.078 0.173
30 251490_at AT3G59490 unknown 0.077 0.167
31 265460_at AT2G46600 [Calcium-binding EF-hand family protein] 0.076 0.121
32 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] -0.398 0.015
33 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 -0.398 0.038
34 263019_at AT1G23870 ATTPS9, trehalose-phosphatase/synthase 9, TPS9, TREHALOSE -6-PHOSPHATASE SYNTHASE S9, TPS9, trehalose-phosphatase/synthase 9 -0.274 -0.031
35 252511_at AT3G46280 [protein kinase-related] -0.233 -0.397
36 249807_at AT5G23870 [Pectinacetylesterase family protein] -0.159 0.018
37 260799_at AT1G78270 AtUGT85A4, UDP-glucosyl transferase 85A4, UGT85A4, UDP-glucosyl transferase 85A4 -0.146 0.116
38 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 -0.117 -0.259
39 256324_at AT1G66760 [MATE efflux family protein] -0.109 0.017
40 262525_at AT1G17060 CHI2, CHIBI 2, CYP72C1, cytochrome p450 72c1, SHK1, SHRINK 1, SOB7, SUPPRESSOR OF PHYB-4 7 -0.107 -0.373
41 264026_at AT2G21060 ATCSP4, COLD SHOCK DOMAIN PROTEIN 4, ATGRP2B, glycine-rich protein 2B, GRP2B, glycine-rich protein 2B -0.103 -0.095
42 261117_at AT1G75310 AUL1, auxilin-like 1 -0.102 0.065
43 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.101 0.012
44 261926_at AT1G22530 PATL2, PATELLIN 2 -0.095 -0.376
45 264680_at AT1G65510 unknown -0.093 -0.194
46 256910_at AT3G24080 [KRR1 family protein] -0.093 0.125
47 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 -0.092 0.322
48 254364_at AT4G22020 [pseudogene] -0.092 0.163
49 259517_at AT1G20630 CAT1, catalase 1 -0.092 0.106
50 247888_at AT5G57920 AtENODL10, ENODL10, early nodulin-like protein 10 -0.091 0.068
51 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 -0.089 -0.162
52 256053_at AT1G07260 UGT71C3, UDP-glucosyl transferase 71C3 -0.088 -0.126
53 262910_at AT1G59710 unknown -0.088 -0.017
54 257342_at AT1G42365 [gypsy-like retrotransposon family (Athila), has a 9.0e-234 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -0.084 0.007
55 260563_at AT2G43840 UGT74F1, UDP-glycosyltransferase 74 F1 -0.082 0.027
56 251843_x_at AT3G54590 ATHRGP1, hydroxyproline-rich glycoprotein, HRGP1, hydroxyproline-rich glycoprotein -0.081 0.031
57 258014_at AT3G19330 unknown -0.076 0.043
58 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 -0.075 0.011
59 265771_at AT2G48030 [DNAse I-like superfamily protein] -0.075 -0.146
60 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 -0.074 -0.214
61 258704_at AT3G09780 ATCRR1, CCR1, CRINKLY4 related 1 -0.074 0.038