4.0:Information of module
ABA control
In comparison with Dark 1day hml help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010162 seed dormancy process BP 8.623e-10
GO:0022611 dormancy process BP 8.623e-10
GO:0019915 lipid storage BP 4.526e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 2.254e-12
GO:0019684 photosynthesis, light reaction BP 5.062e-12
GO:0006091 generation of precursor metabolites and ... BP 2.867e-11
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ABA control		 Log2 signal ratio
Dark 1day hml
1 255048_at AT4G09600 GASA3, GAST1 protein homolog 3 1.544 0.352
2 254440_at AT4G21020 [Late embryogenesis abundant protein (LEA) family protein] 1.532 -0.175
3 254095_at AT4G25140 OLE1, OLEOSIN 1, OLEO1, oleosin 1 1.499 -0.175
4 246299_at AT3G51810 AT3, ATEM1, ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1, EM1, LATE EMBRYOGENESIS ABUNDANT 1, GEA1, GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 1.472 -0.175
5 264079_at AT2G28490 [RmlC-like cupins superfamily protein] 1.450 -0.175
6 266654_at AT2G25890 [Oleosin family protein] 1.361 -0.175
7 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 1.350 3.760
8 250624_at AT5G07330 unknown 1.331 1.495
9 266393_at AT2G41260 ATM17, M17 1.319 4.215
10 256338_at AT1G72100 [late embryogenesis abundant domain-containing protein / LEA domain-containing protein] 1.307 -0.175
11 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 1.274 -0.175
12 263753_at AT2G21490 LEA, dehydrin LEA 1.268 0.508
13 263385_at AT2G40170 ATEM6, ARABIDOPSIS EARLY METHIONINE-LABELLED 6, EM6, EARLY METHIONINE-LABELLED 6, GEA6, LATE EMBRYOGENESIS ABUNDANT 6 1.252 -0.175
14 267431_at AT2G34870 MEE26, maternal effect embryo arrest 26 1.251 -0.175
15 264494_at AT1G27461 unknown 1.244 -0.175
16 251838_at AT3G54940 [Papain family cysteine protease] 1.192 -0.175
17 252019_at AT3G53040 [late embryogenesis abundant protein, putative / LEA protein, putative] 1.152 -0.191
18 256354_at AT1G54870 [NAD(P)-binding Rossmann-fold superfamily protein] 1.144 -0.175
19 264612_at AT1G04560 [AWPM-19-like family protein] 1.141 -0.175
20 250882_at AT5G04000 unknown 1.134 0.532
21 253767_at AT4G28520 CRC, CRUCIFERIN C, CRU3, cruciferin 3 1.129 -0.175
22 252137_at AT3G50980 XERO1, dehydrin xero 1 1.113 2.640
23 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 1.105 -0.175
24 246273_at AT4G36700 [RmlC-like cupins superfamily protein] 1.079 -0.709
25 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 1.078 -0.175
26 260088_at AT1G73190 ALPHA-TIP, ALPHA-TONOPLAST INTRINSIC PROTEIN, TIP3;1 1.057 -0.039
27 256827_at AT3G18570 [Oleosin family protein] 1.055 -0.175
28 259167_at AT3G01570 [Oleosin family protein] 1.041 0.792
29 260458_at AT1G68250 unknown 1.041 -0.175
30 256814_at AT3G21370 BGLU19, beta glucosidase 19 1.009 -0.175
31 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.974 3.011
32 266143_at AT2G38905 [Low temperature and salt responsive protein family] 0.967 -0.175
33 259217_at AT3G03620 [MATE efflux family protein] 0.956 3.519
34 265050_at AT1G52070 [Mannose-binding lectin superfamily protein] -1.016 -0.175
35 247755_at AT5G59090 ATSBT4.12, subtilase 4.12, SBT4.12, subtilase 4.12 -0.881 -1.096
36 248178_at AT5G54370 [Late embryogenesis abundant (LEA) protein-related] -0.665 -0.175
37 258055_at AT3G16250 NDF4, NDH-dependent cyclic electron flow 1, PnsB3, Photosynthetic NDH subcomplex B 3 -0.554 -4.839
38 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.545 -3.279
39 247878_at AT5G57760 unknown -0.515 -0.696
40 254798_at AT4G13050 [Acyl-ACP thioesterase] -0.493 -1.200
41 266979_at AT2G39470 PnsL1, Photosynthetic NDH subcomplex L 1, PPL2, PsbP-like protein 2 -0.479 -3.864
42 265048_at AT1G52050 [Mannose-binding lectin superfamily protein] -0.471 -0.175
43 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.468 0.192
44 253823_at AT4G28030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.455 0.415
45 247943_at AT5G57170 [Tautomerase/MIF superfamily protein] -0.440 -2.806
46 250095_at AT5G17230 PSY, PHYTOENE SYNTHASE -0.430 -2.499
47 261834_at AT1G10640 [Pectin lyase-like superfamily protein] -0.420 -2.850
48 246159_at AT5G20935 CRR42, CHLORORESPIRATORY REDUCTION 42 -0.417 -2.801
49 249120_at AT5G43750 NDH18, NAD(P)H dehydrogenase 18, PnsB5, Photosynthetic NDH subcomplex B 5 -0.408 -5.050
50 259752_at AT1G71040 LPR2, Low Phosphate Root2 -0.402 -1.074
51 252876_at AT4G39970 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.401 -2.543
52 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 -0.382 1.270
53 261788_at AT1G15980 NDF1, NDH-dependent cyclic electron flow 1, NDH48, NAD(P)H DEHYDROGENASE SUBUNIT 48, PnsB1, Photosynthetic NDH subcomplex B 1 -0.376 -3.896
54 253009_at AT4G37930 SHM1, serine transhydroxymethyltransferase 1, SHMT1, SERINE HYDROXYMETHYLTRANSFERASE 1, STM, SERINE TRANSHYDROXYMETHYLTRANSFERASE -0.373 -3.632
55 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 -0.372 -1.481
56 249645_at AT5G36910 THI2.2, thionin 2.2 -0.362 -4.175
57 257172_at AT3G23700 [Nucleic acid-binding proteins superfamily] -0.352 -0.340
58 250262_at AT5G13410 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.350 -1.091
59 258662_at AT3G02900 unknown -0.346 -1.193
60 245321_at AT4G15545 unknown -0.339 0.094
61 247544_at AT5G61670 unknown -0.334 -0.357
62 246997_at AT5G67390 unknown -0.331 1.084
63 248624_at AT5G48790 unknown -0.323 -1.060
64 255645_at AT4G00880 SAUR31, SMALL AUXIN UPREGULATED RNA 31 -0.297 -2.522
65 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.285 -4.199