4.0:Information of module
Root -Cs
In comparison with cdkf:1-2 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 5.886e-06
GO:0050896 response to stimulus BP 7.913e-06
GO:0006950 response to stress BP 5.021e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0030001 metal ion transport BP 2.721e-06
GO:0055085 transmembrane transport BP 5.539e-06
GO:0006811 ion transport BP 7.102e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Root -Cs		 Log2 signal ratio
cdkf:1-2
1 249476_at AT5G38910 [RmlC-like cupins superfamily protein] 0.646 0.805
2 260522_x_at AT2G41730 unknown 0.410 0.460
3 263515_at AT2G21640 unknown 0.399 0.413
4 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.376 0.401
5 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.351 0.486
6 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.334 0.072
7 252115_at AT3G51600 LTP5, lipid transfer protein 5 0.324 0.070
8 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.323 0.354
9 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 0.313 0.195
10 244945_at ATMG00110 ABCI2, ATP-binding cassette I2, CCB206, cytochrome C biogenesis 206 0.286 0.075
11 248777_at AT5G47920 unknown 0.265 0.159
12 253796_at AT4G28460 unknown 0.265 0.346
13 264301_at AT1G78780 [pathogenesis-related family protein] 0.262 -0.145
14 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 0.260 0.135
15 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.256 0.067
16 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.256 0.366
17 267076_at AT2G41090 [Calcium-binding EF-hand family protein] 0.249 0.061
18 247052_at AT5G66700 ATHB53, ARABIDOPSIS THALIANA HOMEOBOX 53, HB-8, HOMEOBOX-8, HB53, homeobox 53 0.249 0.026
19 259743_at AT1G71140 [MATE efflux family protein] 0.240 0.320
20 261908_at AT1G50650 [Stigma-specific Stig1 family protein] 0.236 0.058
21 265260_at AT2G43000 ANAC042, NAC domain containing protein 42, JUB1, JUNGBRUNNEN 1, NAC042, NAC domain containing protein 42 0.236 0.374
22 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 0.215 0.687
23 259008_at AT3G09390 ATMT-1, ARABIDOPSIS THALIANA METALLOTHIONEIN-1, ATMT-K, ARABIDOPSIS THALIANA METALLOTHIONEIN-K, MT2A, metallothionein 2A 0.215 0.169
24 258452_at AT3G22370 AOX1A, alternative oxidase 1A, ATAOX1A, AtHSR3, HSR3, hyper-sensitivity-related 3 0.196 0.069
25 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.189 0.340
26 259293_at AT3G11580 [AP2/B3-like transcriptional factor family protein] 0.183 0.015
27 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.182 0.180
28 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.177 0.421
29 258285_at AT3G16140 PSAH-1, photosystem I subunit H-1 0.166 -0.019
30 254543_at AT4G19810 ChiC, class V chitinase 0.166 0.497
31 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.163 0.099
32 249454_at AT5G39520 unknown 0.161 0.008
33 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 0.151 -0.040
34 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.151 0.146
35 263553_at AT2G16430 ATPAP10, PAP10, purple acid phosphatase 10 0.151 0.010
36 260296_at AT1G63750 [Disease resistance protein (TIR-NBS-LRR class) family] 0.145 0.183
37 251432_at AT3G59820 AtLETM1, LETM1, leucine zipper-EF-hand-containing transmembrane protein 1 0.139 0.200
38 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.400 0.063
39 262373_at AT1G73120 unknown -0.390 0.286
40 245962_at AT5G19700 [MATE efflux family protein] -0.361 -0.006
41 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.318 -0.118
42 251293_at AT3G61930 unknown -0.317 -0.034
43 260893_at AT1G29180 [Cysteine/Histidine-rich C1 domain family protein] -0.309 -0.052
44 257124_at AT3G20040 ATHXK4, HKL2, HEXOKINASE-LIKE 2 -0.302 -0.109
45 254912_at AT4G11230 [Riboflavin synthase-like superfamily protein] -0.302 -0.034
46 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.288 -0.064
47 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.280 0.065
48 252501_at AT3G46880 unknown -0.273 0.058
49 264794_at AT1G08670 [ENTH/VHS family protein] -0.270 0.071
50 251249_at AT3G62160 [HXXXD-type acyl-transferase family protein] -0.256 0.119
51 255550_at AT4G01970 AtSTS, stachyose synthase, RS4, raffinose synthase 4, STS, stachyose synthase -0.244 0.008
52 248969_at AT5G45310 unknown -0.243 -0.057
53 249972_at AT5G19040 ATIPT5, Arabidopsis thaliana ISOPENTENYLTRANSFERASE 5, IPT5, isopentenyltransferase 5 -0.242 -0.153
54 255432_at AT4G03330 ATSYP123, SYP123, syntaxin of plants 123 -0.241 -0.007
55 252599_at AT3G45390 LecRK-I.2, L-type lectin receptor kinase I.2 -0.235 -0.051
56 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 -0.232 0.089
57 255608_at AT4G01140 unknown -0.225 -0.074
58 246872_at AT5G26080 [proline-rich family protein] -0.222 -0.062
59 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.215 -0.164
60 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 -0.213 0.027
61 260806_at AT1G78260 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.207 -0.119
62 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.204 -0.362
63 250175_at AT5G14390 [alpha/beta-Hydrolases superfamily protein] -0.200 0.027
64 248916_at AT5G45840 [Leucine-rich repeat protein kinase family protein] -0.199 -0.169
65 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.199 -0.234
66 260902_at AT1G21440 [Phosphoenolpyruvate carboxylase family protein] -0.199 0.079
67 254027_at AT4G25835 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.198 -0.162
68 246839_at AT5G26720 unknown -0.197 -0.024
69 246459_at AT5G16900 [Leucine-rich repeat protein kinase family protein] -0.194 -0.037
70 253823_at AT4G28030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.191 -0.156
71 247582_at AT5G60760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.191 -0.023
72 266785_at AT2G28970 [Leucine-rich repeat protein kinase family protein] -0.189 -0.057
73 256293_at AT1G69440 AGO7, ARGONAUTE7, ZIP, ZIPPY -0.189 -0.163