4.0:Information of module
sni1
In comparison with Time-0 chr11-1chr17-1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 2.089e-39
GO:0002376 immune system process BP 1.662e-38
GO:0045087 innate immune response BP 2.994e-38
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042546 cell wall biogenesis BP 1.354e-10
GO:0010075 regulation of meristem growth BP 4.385e-09
GO:0035266 meristem growth BP 9.457e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sni1		 Log2 signal ratio
Time-0 chr11-1chr17-1
1 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.923 -0.613
2 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.888 -1.235
3 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.820 -1.245
4 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 0.819 -1.449
5 260568_at AT2G43570 CHI, chitinase, putative 0.741 -0.453
6 248322_at AT5G52760 [Copper transport protein family] 0.733 -0.401
7 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 0.695 -0.763
8 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.689 -1.456
9 259559_at AT1G21240 WAK3, wall associated kinase 3 0.656 -0.893
10 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 0.642 -0.914
11 252309_at AT3G49340 [Cysteine proteinases superfamily protein] 0.641 -0.414
12 264648_at AT1G09080 BIP3, binding protein 3 0.638 -0.571
13 264635_at AT1G65500 unknown 0.638 -0.653
14 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.636 -1.178
15 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 0.627 -1.006
16 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.596 -0.267
17 247314_at AT5G64000 ATSAL2, SAL2 0.594 -0.788
18 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.589 -0.558
19 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.586 -0.579
20 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.583 -0.444
21 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 0.563 -0.897
22 267546_at AT2G32680 AtRLP23, receptor like protein 23, RLP23, receptor like protein 23 0.561 -1.114
23 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.558 -0.621
24 255941_at AT1G20350 ATTIM17-1, translocase inner membrane subunit 17-1, TIM17-1, translocase inner membrane subunit 17-1 0.556 0.259
25 260556_at AT2G43620 [Chitinase family protein] 0.550 -0.531
26 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor 0.543 0.023
27 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.540 0.311
28 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.540 -0.556
29 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.540 -0.335
30 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.534 -1.014
31 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.521 -0.603
32 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.516 -0.675
33 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 0.506 -0.320
34 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.506 -0.834
35 262177_at AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 0.502 -0.497
36 248333_at AT5G52390 [PAR1 protein] 0.475 -0.915
37 264958_at AT1G76960 unknown 0.468 -0.763
38 262542_at AT1G34180 anac016, NAC domain containing protein 16, NAC016, NAC domain containing protein 16 0.467 0.027
39 257624_at AT3G26220 CYP71B3, cytochrome P450, family 71, subfamily B, polypeptide 3 0.455 0.004
40 258203_at AT3G13950 unknown 0.450 -0.927
41 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 0.449 -0.174
42 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] 0.446 -0.395
43 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.440 0.371
44 261927_at AT1G22500 AtATL15, Arabidopsis thaliana Arabidopsis toxicos en levadura 15, ATL15, Arabidopsis toxicos en levadura 15 0.435 -0.182
45 265597_at AT2G20142 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.432 0.143
46 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 0.430 -1.131
47 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.426 -0.578
48 264434_at AT1G10340 [Ankyrin repeat family protein] 0.426 -0.557
49 255596_at AT4G01720 AtWRKY47, WRKY47 0.423 -0.195
50 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.419 0.049
51 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 0.417 -0.510
52 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.416 -0.802
53 250365_at AT5G11410 [Protein kinase superfamily protein] 0.415 -0.020
54 251975_at AT3G53230 AtCDC48B, cell division cycle 48B 0.414 -0.277
55 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.409 -1.012
56 248551_at AT5G50200 ATNRT3.1, NRT3.1, NITRATE TRANSPORTER 3.1, WR3, WOUND-RESPONSIVE 3 0.408 -0.944
57 266017_at AT2G18690 unknown 0.403 -0.526
58 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.396 0.101
59 249614_at AT5G37300 WSD1 -0.413 -0.055
60 259001_at AT3G01960 unknown -0.382 -0.089
61 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.317 -0.043
62 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.307 -0.189
63 254023_at AT4G25770 [alpha/beta-Hydrolases superfamily protein] -0.300 -0.050
64 257051_at AT3G15270 SPL5, squamosa promoter binding protein-like 5 -0.273 -0.077
65 258222_at AT3G15680 [Ran BP2/NZF zinc finger-like superfamily protein] -0.267 -0.042
66 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.259 0.142
67 252215_at AT3G50240 KICP-02 -0.256 0.169
68 258901_at AT3G05640 [Protein phosphatase 2C family protein] -0.250 -0.346
69 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 -0.235 0.069
70 250751_at AT5G05890 [UDP-Glycosyltransferase superfamily protein] -0.234 -0.219
71 262891_at AT1G79460 ATKS, ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE, ATKS1, ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE 1, GA2, GA REQUIRING 2, KS, KS1, ENT-KAURENE SYNTHASE 1 -0.233 0.289
72 248696_at AT5G48360 [Actin-binding FH2 (formin homology 2) family protein] -0.230 -0.099
73 248074_at AT5G55730 FLA1, FASCICLIN-like arabinogalactan 1 -0.228 0.007
74 262312_at AT1G70830 MLP28, MLP-like protein 28 -0.223 -0.015
75 258796_at AT3G04630 WDL1, WVD2-like 1 -0.222 -0.097
76 258392_at AT3G15400 ATA20, anther 20 -0.217 -0.067
77 260041_at AT1G68780 [RNI-like superfamily protein] -0.216 -0.150
78 255549_at AT4G01950 ATGPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3, GPAT3, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3 -0.216 -0.310
79 264025_at AT2G21050 LAX2, like AUXIN RESISTANT 2 -0.215 0.094
80 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.208 0.101
81 249469_at AT5G39320 UDG4, UDP-glucose dehydrogenase 4 -0.205 0.004
82 260141_at AT1G66350 RGL, RGL1, RGA-like 1 -0.203 0.061
83 256066_at AT1G06980 unknown -0.203 -0.152
84 257271_at AT3G28007 AtSWEET4, SWEET4 -0.202 -0.633
85 263677_at AT1G04520 PDLP2, plasmodesmata-located protein 2 -0.199 0.079
86 266946_at AT2G18890 [Protein kinase superfamily protein] -0.197 -0.058
87 251174_at AT3G63200 PLA IIIB, PLP9, PATATIN-like protein 9 -0.196 -0.145
88 264693_at AT1G69970 CLE26, CLAVATA3/ESR-RELATED 26 -0.195 -0.166
89 263002_at AT1G54200 unknown -0.191 -0.023
90 261893_at AT1G80690 [PPPDE putative thiol peptidase family protein] -0.190 -0.010
91 245141_at AT2G45400 BEN1, BRI1-5 ENHANCED 1 -0.186 0.049
92 253947_at AT4G26760 MAP65-2, microtubule-associated protein 65-2 -0.184 0.181
93 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.183 0.111
94 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.181 -0.113
95 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.181 -0.382
96 261421_at AT1G18840 IQD30, IQ-domain 30 -0.180 0.177
97 250379_at AT5G11590 TINY2, TINY2 -0.177 -0.096
98 256671_at AT3G52290 IQD3, IQ-domain 3 -0.176 -0.075
99 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -0.175 -0.075
100 258341_at AT3G22790 NET1A, Networked 1A -0.173 -0.070
101 245864_at AT1G58070 unknown -0.173 0.197
102 253533_at AT4G31590 ATCSLC05, CELLULOSE-SYNTHASE LIKE C5, ATCSLC5, Cellulose-synthase-like C5, CSLC05, CELLULOSE-SYNTHASE LIKE C5, CSLC5, Cellulose-synthase-like C5 -0.170 -0.011
103 261150_at AT1G19640 JMT, jasmonic acid carboxyl methyltransferase -0.163 0.124
104 260494_at AT2G41820 PXC3, PXY/TDR-correlated 3 -0.162 0.220
105 255779_at AT1G18650 PDCB3, plasmodesmata callose-binding protein 3 -0.160 0.324
106 251865_at AT3G54930 [Protein phosphatase 2A regulatory B subunit family protein] -0.159 -0.057
107 263628_at AT2G04780 FLA7, FASCICLIN-like arabinoogalactan 7 -0.156 0.272
108 246269_at AT4G37110 [Zinc-finger domain of monoamine-oxidase A repressor R1] -0.154 0.435
109 257263_at AT3G22070 [proline-rich family protein] -0.153 0.141
110 260353_at AT1G69230 SP1L2, SPIRAL1-like2 -0.152 -0.041
111 266223_at AT2G28790 [Pathogenesis-related thaumatin superfamily protein] -0.149 0.031
112 256612_at AT3G29280 unknown -0.149 0.100
113 249303_at AT5G41460 unknown -0.149 0.088
114 253729_at AT4G29360 [O-Glycosyl hydrolases family 17 protein] -0.147 0.256
115 262154_at AT1G52700 [alpha/beta-Hydrolases superfamily protein] -0.147 0.124