4.0:Information of module
Pst-DC3000(avrRpm1)-4hpi
In comparison with proline help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009753 response to jasmonic acid BP 5.434e-59
GO:0009719 response to endogenous stimulus BP 5.583e-57
GO:0009611 response to wounding BP 7.485e-55
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048509 regulation of meristem development BP 3.262e-05
GO:0048638 regulation of developmental growth BP 7.194e-05
GO:0040008 regulation of growth BP 7.757e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Pst-DC3000(avrRpm1)-4hpi		 Log2 signal ratio
proline
1 264415_at AT1G43160 RAP2.6, related to AP2 6 0.894 -0.229
2 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A 0.845 -0.575
3 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 0.794 -1.074
4 257835_at AT3G25180 CYP82G1, cytochrome P450, family 82, subfamily G, polypeptide 1 0.724 -0.376
5 245209_at AT5G12340 unknown 0.723 -0.841
6 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] 0.710 -0.971
7 261037_at AT1G17420 ATLOX3, Arabidopsis thaliana lipoxygenase 3, LOX3, lipoxygenase 3 0.705 -0.432
8 249071_at AT5G44050 [MATE efflux family protein] 0.691 -0.242
9 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.679 -0.377
10 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.677 -0.734
11 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 0.669 -0.532
12 262616_at AT1G06620 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.657 -0.445
13 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.654 -0.991
14 266800_at AT2G22880 [VQ motif-containing protein] 0.649 -0.341
15 254996_at AT4G10390 [Protein kinase superfamily protein] 0.636 -0.773
16 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 0.635 -0.306
17 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.622 -0.762
18 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 0.612 -0.587
19 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.608 -0.220
20 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.601 -0.862
21 255527_at AT4G02360 unknown 0.601 -0.706
22 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 0.591 -0.359
23 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.580 -0.048
24 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 0.569 -0.507
25 266456_at AT2G22770 NAI1 0.565 -0.878
26 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 0.555 -0.087
27 247175_at AT5G65280 GCL1, GCR2-like 1 0.547 -0.519
28 257644_at AT3G25780 AOC3, allene oxide cyclase 3 0.545 -0.232
29 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.542 -0.357
30 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.541 -0.097
31 247933_at AT5G56980 unknown 0.532 -0.450
32 265723_at AT2G32140 [transmembrane receptors] 0.531 -0.744
33 265305_at AT2G20340 AAS, aromatic aldehyde synthase, AtAAS 0.527 -0.562
34 266977_at AT2G39420 [alpha/beta-Hydrolases superfamily protein] 0.524 -0.591
35 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.518 -0.490
36 259878_at AT1G76790 IGMT5, indole glucosinolate O-methyltransferase 5 0.492 -0.562
37 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 0.489 -1.164
38 260237_at AT1G74430 ATMYB95, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ATMYBCP66, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, MYB95, myb domain protein 95 0.479 -0.721
39 247030_at AT5G67210 IRX15-L, IRX15-LIKE 0.475 -0.217
40 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A 0.463 -0.517
41 257875_at AT3G17120 unknown 0.463 -0.343
42 254387_at AT4G21850 ATMSRB9, methionine sulfoxide reductase B9, MSRB9, methionine sulfoxide reductase B9 0.462 -0.129
43 263182_at AT1G05575 unknown 0.457 -0.261
44 249910_at AT5G22630 ADT5, arogenate dehydratase 5 0.452 -0.424
45 267425_at AT2G34810 [FAD-binding Berberine family protein] 0.443 -0.107
46 246779_at AT5G27520 AtPNC2, PNC2, peroxisomal adenine nucleotide carrier 2 0.443 -0.388
47 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 0.441 -0.228
48 259879_at AT1G76650 CML38, calmodulin-like 38 0.435 -0.400
49 254150_at AT4G24350 [Phosphorylase superfamily protein] 0.435 -0.571
50 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.434 -0.047
51 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] 0.429 -0.757
52 251788_at AT3G55420 unknown -0.284 -0.119
53 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.249 0.209
54 249008_at AT5G44680 [DNA glycosylase superfamily protein] -0.235 -0.012
55 260041_at AT1G68780 [RNI-like superfamily protein] -0.234 -0.063
56 260395_at AT1G69780 ATHB13 -0.214 0.314
57 252612_at AT3G45160 [Putative membrane lipoprotein] -0.199 0.062
58 250002_at AT5G18690 AGP25, arabinogalactan protein 25, ATAGP25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 -0.191 0.052
59 265250_at AT2G01950 BRL2, BRI1-like 2, VH1, VASCULAR HIGHWAY 1 -0.175 -0.044
60 263384_at AT2G40130 SMXL8, SMAX1-like 8 -0.172 0.019
61 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 -0.170 0.164
62 250696_at AT5G06790 unknown -0.165 0.352
63 248420_at AT5G51560 [Leucine-rich repeat protein kinase family protein] -0.162 0.003
64 254362_at AT4G22160 unknown -0.162 0.009
65 258332_at AT3G16180 NRT1.12, nitrate transporter 1.12 -0.158 0.327
66 253285_at AT4G34250 KCS16, 3-ketoacyl-CoA synthase 16 -0.154 -0.189
67 261594_at AT1G33240 AT-GTL1, GT2-LIKE 1, ATGTL1, GTL1, GT-2-like 1 -0.152 0.090
68 265175_at AT1G23480 ATCSLA03, cellulose synthase-like A3, ATCSLA3, CSLA03, CSLA03, cellulose synthase-like A3, CSLA3, CELLULOSE SYNTHASE-LIKE A3 -0.150 -0.248
69 264605_at AT1G04550 BDL, BODENLOS, IAA12, indole-3-acetic acid inducible 12 -0.150 0.082
70 265918_at AT2G15090 KCS8, 3-ketoacyl-CoA synthase 8 -0.147 0.113
71 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.144 0.355
72 264501_at AT1G09390 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.144 -0.133
73 248028_at AT5G55620 unknown -0.141 0.145
74 254272_at AT4G22850 [SNARE associated Golgi protein family] -0.141 0.128
75 246576_at AT1G31650 ATROPGEF14, ROPGEF14, ROP (rho of plants) guanine nucleotide exchange factor 14 -0.141 -0.028
76 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.139 -0.303
77 248646_at AT5G49100 unknown -0.137 0.263
78 249750_at AT5G24570 unknown -0.137 0.217
79 257860_at AT3G13062 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.132 -0.002
80 252272_at AT3G49670 BAM2, BARELY ANY MERISTEM 2 -0.131 0.189
81 247331_at AT5G63530 ATFP3, ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3, FP3, farnesylated protein 3 -0.130 0.051
82 253835_at AT4G27820 BGLU9, beta glucosidase 9 -0.129 0.347
83 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] -0.129 -0.387
84 249288_at AT5G41050 [Pollen Ole e 1 allergen and extensin family protein] -0.128 0.415
85 253050_at AT4G37450 AGP18, arabinogalactan protein 18, ATAGP18 -0.127 0.295
86 253723_at AT4G29240 [Leucine-rich repeat (LRR) family protein] -0.123 0.142
87 245326_at AT4G14100 [transferases, transferring glycosyl groups] -0.122 0.008
88 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] -0.117 0.350
89 246917_at AT5G25280 [serine-rich protein-related] -0.117 0.207
90 254092_at AT4G25090 [Riboflavin synthase-like superfamily protein] -0.117 -0.027
91 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.114 -0.009
92 265990_at AT2G24280 [alpha/beta-Hydrolases superfamily protein] -0.113 -0.102
93 252901_at AT4G39550 [Galactose oxidase/kelch repeat superfamily protein] -0.113 0.128
94 250160_at AT5G15210 ATHB30, homeobox protein 30, HB30, homeobox protein 30, ZFHD3, ZINC FINGER HOMEODOMAIN 3, ZHD8, ZINC FINGER HOMEODOMAIN 8 -0.112 0.190
95 256154_at AT3G08490 unknown -0.111 -0.021
96 249693_at AT5G35750 AHK2, histidine kinase 2, HK2, histidine kinase 2 -0.111 -0.149
97 250728_at AT5G06440 unknown -0.109 0.085
98 257297_at AT3G28040 [Leucine-rich receptor-like protein kinase family protein] -0.109 0.045
99 262753_at AT1G16340 ATKDSA2, ATKSDA -0.107 -0.197
100 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.106 -0.020
101 248507_at AT5G50420 [O-fucosyltransferase family protein] -0.105 0.015
102 266921_at AT2G45970 CYP86A8, cytochrome P450, family 86, subfamily A, polypeptide 8, LCR, LACERATA -0.105 0.128