4.0:Information of module
arr10 arr12
In comparison with mil4 sid2 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042435 indole-containing compound biosynthetic ... BP 5.531e-05
GO:0009813 flavonoid biosynthetic process BP 5.718e-05
GO:0009718 anthocyanin-containing compound biosynth... BP 6.619e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0008104 protein localization BP 1.206e-05
GO:0015031 protein transport BP 3.324e-05
GO:0007264 small GTPase mediated signal transductio... BP 3.411e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
arr10 arr12		 Log2 signal ratio
mil4 sid2
1 245532_at AT4G15110 CYP97B3, cytochrome P450, family 97, subfamily B, polypeptide 3 0.453 0.046
2 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.407 -0.550
3 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.282 -0.085
4 256603_at AT3G28270 unknown 0.247 -0.201
5 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.200 0.008
6 262719_at AT1G43590 unknown 0.192 0.082
7 248467_at AT5G50800 AtSWEET13, SWEET13 0.186 -0.553
8 256577_at AT3G28220 [TRAF-like family protein] 0.181 -0.025
9 264102_at AT1G79270 ECT8, evolutionarily conserved C-terminal region 8 0.172 -0.507
10 255604_at AT4G01080 TBL26, TRICHOME BIREFRINGENCE-LIKE 26 0.166 -0.369
11 259760_at AT1G77580 unknown 0.150 -0.125
12 267166_at AT2G37720 TBL15, TRICHOME BIREFRINGENCE-LIKE 15 0.150 -0.279
13 251713_at AT3G56080 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.145 -0.531
14 254716_at AT4G13560 UNE15, unfertilized embryo sac 15 0.139 0.035
15 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 0.136 -0.481
16 261922_at AT1G65890 AAE12, acyl activating enzyme 12 0.126 -0.086
17 256924_at AT3G29590 AT5MAT 0.124 -0.077
18 248205_at AT5G54300 unknown 0.123 -0.085
19 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like 0.123 -0.235
20 259018_at AT3G07390 AIR12, Auxin-Induced in Root cultures 12 0.120 -0.147
21 258982_at AT3G08870 LecRK-VI.1, L-type lectin receptor kinase VI.1 0.119 -0.309
22 250479_at AT5G10260 AtRABH1e, RAB GTPase homolog H1E, RABH1e, RAB GTPase homolog H1E 0.118 -0.059
23 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.110 -0.042
24 256093_at AT1G20823 [RING/U-box superfamily protein] 0.109 -0.426
25 252977_at AT4G38560 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.108 0.009
26 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.108 -0.551
27 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 0.108 -0.134
28 260380_at AT1G73870 BBX16, B-box domain protein 16, COL7, CONSTANS-LIKE 7 0.105 -0.425
29 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 0.100 -0.412
30 267070_at AT2G41000 [Chaperone DnaJ-domain superfamily protein] 0.098 -0.098
31 256540_at AT3G32917 [gypsy-like retrotransposon family, has a 1.0e-114 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 0.097 -0.024
32 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.095 0.059
33 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.095 -0.034
34 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 0.094 -0.063
35 250503_at AT5G09820 [Plastid-lipid associated protein PAP / fibrillin family protein] 0.085 0.021
36 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.083 -0.673
37 258245_at AT3G29075 [glycine-rich protein] 0.083 0.078
38 249326_at AT5G40840 AtRAD21.1, Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 0.082 0.073
39 262751_at AT1G16310 [Cation efflux family protein] 0.081 -0.037
40 254746_at AT4G12980 [Auxin-responsive family protein] 0.080 -0.304
41 249208_at AT5G42650 AOS, allene oxide synthase, CYP74A, CYTOCHROME P450 74A, DDE2, DELAYED DEHISCENCE 2 0.080 -0.075
42 253500_at AT4G31920 ARR10, response regulator 10, RR10, response regulator 10 -0.644 0.030
43 264374_at AT2G25180 ARR12, response regulator 12, RR12, response regulator 12 -0.574 0.009
44 245392_at AT4G15680 [Thioredoxin superfamily protein] -0.162 -0.084
45 263901_at AT2G36320 [A20/AN1-like zinc finger family protein] -0.127 0.104
46 264788_at AT2G17880 DJC24, DNA J protein C24 -0.122 0.197
47 261924_at AT1G22550 [Major facilitator superfamily protein] -0.118 0.110
48 256709_at AT3G30330 [CACTA-like transposase family (Ptta/En/Spm), has a 1.7e-83 P-value blast match to At1g36190.1/92-340 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.115 -0.017
49 250264_at AT5G12890 [UDP-Glycosyltransferase superfamily protein] -0.110 0.069
50 261472_at AT1G14470 [Pentatricopeptide repeat (PPR) superfamily protein] -0.108 0.045
51 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 -0.108 0.043
52 265839_at AT2G14540 ATSRP2, SRP2, serpin 2 -0.107 -0.019
53 261807_at AT1G30515 unknown -0.107 -0.025
54 255219_at AT4G07720 [pseudogene] -0.106 0.001
55 249479_at AT5G38960 [RmlC-like cupins superfamily protein] -0.106 0.081
56 250157_at AT5G15180 [Peroxidase superfamily protein] -0.106 0.078
57 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.103 0.321
58 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 -0.102 -0.150
59 251748_at AT3G55680 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.102 0.004
60 252330_at AT3G48770 [DNA binding] -0.101 0.020
61 247344_at AT5G63750 ARI13, ARIADNE 13, ATARI13, ARABIDOPSIS ARIADNE 13 -0.100 0.066
62 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 -0.098 -0.001
63 261690_at AT1G50090 AtBCAT7, BCAT7, branched-chain amino acid transaminase 7 -0.094 0.019
64 254197_at AT4G24040 ATTRE1, TRE1, trehalase 1 -0.094 0.219
65 247016_at AT5G66970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.093 0.014
66 262027_at AT1G35515 HOS10, high response to osmotic stress 10, MYB8 -0.093 -0.018
67 252944_at AT4G39320 [microtubule-associated protein-related] -0.093 -0.049
68 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 -0.092 0.072
69 250309_at AT5G12220 [las1-like family protein] -0.092 -0.020
70 257035_at AT3G19270 CYP707A4, cytochrome P450, family 707, subfamily A, polypeptide 4 -0.091 -0.073
71 255186_at AT4G07750 [CACTA-like transposase family (Tnp2/En/Spm), has a 2.9e-168 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] -0.091 0.039
72 257110_x_at AT3G30440 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G14130.1)] -0.091 0.041
73 267042_at AT2G34320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.089 0.018
74 255831_at AT2G33350 [CCT motif family protein] -0.089 0.009
75 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 -0.088 -0.129
76 247369_at AT5G63340 unknown -0.087 -0.000
77 249012_at AT5G44620 CYP706A3, cytochrome P450, family 706, subfamily A, polypeptide 3 -0.084 0.040
78 258600_at AT3G02810 LIP2, LOST IN POLLEN TUBE GUIDANCE 2 -0.084 0.015
79 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.083 -0.062
80 247731_at AT5G59590 UGT76E2, UDP-glucosyl transferase 76E2 -0.083 0.098
81 251284_at AT3G61840 unknown -0.081 0.043