4.0:Information of module
CCA14 dark late
In comparison with rdr6-15 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 3.209e-14
GO:0009719 response to endogenous stimulus BP 5.873e-14
GO:0009725 response to hormone BP 9.839e-14
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043248 proteasome assembly BP 8.595e-04
GO:0051788 response to misfolded protein BP 8.595e-04
GO:0080167 response to karrikin BP 1.080e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
CCA14 dark late		 Log2 signal ratio
rdr6-15
1 246267_at AT1G31812 ACBP, ACYL-COA-BINDING PROTEIN, ACBP6, acyl-CoA-binding protein 6 1.161 -0.002
2 266719_at AT2G46830 AtCCA1, CCA1, circadian clock associated 1 1.100 0.109
3 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.720 -0.423
4 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.655 -0.520
5 264211_at AT1G22770 FB, GI, GIGANTEA 0.624 -0.019
6 247323_at AT5G64170 LNK1, night light-inducible and clock-regulated 1 0.617 -0.088
7 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.613 -0.199
8 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.608 -0.183
9 250665_at AT5G06980 LNK4, night light-inducible and clock-regulated 4 0.601 -0.089
10 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.577 -0.044
11 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.569 -0.350
12 252429_at AT3G47500 CDF3, cycling DOF factor 3 0.559 -0.132
13 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.514 -0.233
14 247023_at AT5G67060 HEC1, HECATE 1 0.510 0.048
15 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 0.499 -0.102
16 253794_at AT4G28720 YUC8, YUCCA 8 0.487 -0.270
17 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 0.481 0.206
18 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.479 0.065
19 253155_at AT4G35720 unknown 0.468 0.010
20 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.453 0.096
21 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.436 0.034
22 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.409 -0.050
23 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] 0.405 -0.169
24 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.395 0.009
25 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 0.382 0.073
26 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 0.378 -0.076
27 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.366 0.049
28 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.362 -0.050
29 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.361 0.084
30 264636_at AT1G65490 unknown -0.744 0.281
31 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 -0.576 0.450
32 245346_at AT4G17090 AtBAM3, BAM3, BETA-AMYLASE 3, BMY8, BETA-AMYLASE 8, CT-BMY, chloroplast beta-amylase -0.475 0.264
33 267364_at AT2G40080 ELF4, EARLY FLOWERING 4 -0.475 0.297
34 257817_at AT3G25150 [Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain] -0.382 -0.069
35 248237_at AT5G53890 AtPSKR2, PSKR2, phytosylfokine-alpha receptor 2 -0.311 -0.139
36 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.310 0.154
37 265611_at AT2G25510 unknown -0.299 0.335
38 266358_at AT2G32280 VCC, VASCULATURE COMPLEXITY AND CONNECTIVITY -0.276 0.140
39 267260_at AT2G23130 AGP17, arabinogalactan protein 17, ATAGP17 -0.223 0.469
40 254240_at AT4G23496 SP1L5, SPIRAL1-like5 -0.215 0.258
41 260205_at AT1G70700 JAZ9, JASMONATE-ZIM-DOMAIN PROTEIN 9, TIFY7 -0.207 -0.123
42 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 -0.206 -0.079
43 267569_at AT2G30790 PSBP-2, photosystem II subunit P-2 -0.202 0.169
44 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor -0.196 0.155
45 255612_at AT4G01240 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.195 0.091
46 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR -0.172 0.323
47 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.171 0.256
48 260427_at AT1G72430 SAUR78, SMALL AUXIN UPREGULATED RNA 78 -0.165 0.214
49 255235_at AT4G05510 [hAT-like transposase family (hobo/Ac/Tam3), has a 4.0e-144 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)] -0.155 0.275
50 254130_at AT4G24540 AGL24, AGAMOUS-like 24 -0.147 0.170
51 254691_at AT4G17840 unknown -0.145 -0.051
52 262520_at AT1G17150 [Pectin lyase-like superfamily protein] -0.144 0.123
53 250469_at AT5G10130 [Pollen Ole e 1 allergen and extensin family protein] -0.143 0.100
54 249736_at AT5G24460 unknown -0.142 0.145
55 254927_at AT4G11400 [ARID/BRIGHT DNA-binding domain] -0.140 -0.003
56 259968_at AT1G76530 [Auxin efflux carrier family protein] -0.137 0.136
57 259547_at AT1G35370 [gypsy-like retrotransposon family, has a 8.7e-191 P-value blast match to GB:AAD22153 polyprotein (Gypsy_Ty3-element) (Sorghum bicolor)] -0.136 0.048