4.0:Information of module
CCA14 dark early
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050826 response to freezing BP 1.990e-03
GO:0015802 basic amino acid transport BP 1.344e-02
GO:0048831 regulation of shoot system development BP 1.453e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043161 proteasome-mediated ubiquitin-dependent ... BP 1.001e-04
GO:0043248 proteasome assembly BP 1.193e-03
GO:0051788 response to misfolded protein BP 1.193e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
CCA14 dark early		 Log2 signal ratio
Leafminer damaged seedlings
1 246267_at AT1G31812 ACBP, ACYL-COA-BINDING PROTEIN, ACBP6, acyl-CoA-binding protein 6 1.103 -0.045
2 255048_at AT4G09600 GASA3, GAST1 protein homolog 3 0.500 -0.052
3 246299_at AT3G51810 AT3, ATEM1, ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1, EM1, LATE EMBRYOGENESIS ABUNDANT 1, GEA1, GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 0.339 0.042
4 246242_at AT4G36600 [Late embryogenesis abundant (LEA) protein] 0.294 0.018
5 266274_at AT2G29380 HAI3, highly ABA-induced PP2C gene 3 0.283 -0.139
6 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.237 0.902
7 250158_at AT5G15190 unknown 0.226 0.656
8 261936_at AT1G22600 [Late embryogenesis abundant protein (LEA) family protein] 0.206 -0.024
9 260090_at AT1G73310 scpl4, serine carboxypeptidase-like 4 0.185 -0.172
10 261261_at AT1G26730 [EXS (ERD1/XPR1/SYG1) family protein] 0.185 0.486
11 252314_at AT3G49400 [Transducin/WD40 repeat-like superfamily protein] 0.164 -0.022
12 262147_at AT1G52570 PLDALPHA2, phospholipase D alpha 2 0.155 -0.055
13 250493_at AT5G09800 [ARM repeat superfamily protein] 0.154 0.162
14 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 0.152 -0.000
15 257817_at AT3G25150 [Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain] -0.418 -0.031
16 264565_at AT1G05280 unknown -0.324 0.089
17 266358_at AT2G32280 VCC, VASCULATURE COMPLEXITY AND CONNECTIVITY -0.253 0.007
18 249255_at AT5G41610 ATCHX18, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18, CHX18, cation/H+ exchanger 18 -0.218 0.068
19 249186_at AT5G43040 [Cysteine/Histidine-rich C1 domain family protein] -0.206 -0.037
20 260012_at AT1G67865 unknown -0.184 0.169
21 261504_at AT1G71692 AGL12, AGAMOUS-like 12, XAL1, XAANTAL1 -0.182 -0.036
22 247581_at AT5G61350 [Protein kinase superfamily protein] -0.162 -0.284
23 246189_at AT5G20910 AIP2, ABI3-interacting protein 2 -0.160 0.156
24 256644_at AT3G32300 [pseudogene] -0.156 0.009
25 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.152 -0.211
26 253084_at AT4G36260 SRS2, SHI RELATED SEQUENCE 2, STY2, STYLISH 2 -0.148 -0.068
27 259004_at AT3G01840 LYK2, LysM-containing receptor-like kinase 2 -0.146 0.154