4.0:Information of module
ga-1 1 hr 100 uM GA3
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050794 regulation of cellular process BP 1.691e-10
GO:0009719 response to endogenous stimulus BP 4.878e-10
GO:0010033 response to organic substance BP 5.130e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009725 response to hormone BP 8.291e-13
GO:0033993 response to lipid BP 5.809e-12
GO:0009719 response to endogenous stimulus BP 9.256e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ga-1 1 hr 100 uM GA3		 Log2 signal ratio
Leafminer damaged seedlings
1 251575_at AT3G58120 ATBZIP61, BZIP61 0.304 -0.767
2 259985_at AT1G76620 unknown 0.273 -0.083
3 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.270 0.932
4 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.269 -0.404
5 267515_at AT2G45680 TCP9, TCP domain protein 9 0.228 -0.039
6 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.225 -0.031
7 260141_at AT1G66350 RGL, RGL1, RGA-like 1 0.219 0.176
8 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.202 0.746
9 262850_at AT1G14920 GAI, GIBBERELLIC ACID INSENSITIVE, RGA2, RESTORATION ON GROWTH ON AMMONIA 2 0.200 -0.135
10 250167_at AT5G15310 ATMIXTA, ATMYB16, myb domain protein 16, MYB16, myb domain protein 16 0.197 -0.352
11 265342_at AT2G18300 HBI1, HOMOLOG OF BEE2 INTERACTING WITH IBH 1 0.188 -0.224
12 247177_at AT5G65300 unknown 0.180 0.785
13 253406_at AT4G32890 GATA9, GATA transcription factor 9 0.163 -0.253
14 253123_at AT4G36000 [Pathogenesis-related thaumatin superfamily protein] 0.162 0.111
15 256720_at AT2G34140 [Dof-type zinc finger DNA-binding family protein] 0.162 0.101
16 260081_at AT1G78170 unknown 0.160 0.087
17 256010_at AT1G19220 ARF11, AUXIN RESPONSE FACTOR11, ARF19, auxin response factor 19, IAA22, indole-3-acetic acid inducible 22 0.155 -0.040
18 254768_at AT4G13320 unknown 0.151 -0.094
19 250327_at AT5G12050 unknown 0.146 -0.252
20 251372_at AT3G60520 unknown 0.144 0.244
21 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 0.144 -0.358
22 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 0.143 -0.053
23 247976_at AT5G56830 [copia-like retrotransposon family, has a 8.7e-14 P-value blast match to gb|AAO73521.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 0.143 -0.033
24 267535_at AT2G41940 ZFP8, zinc finger protein 8 0.142 -0.213
25 263208_at AT1G10480 ZFP5, zinc finger protein 5 0.140 0.016
26 247068_at AT5G66800 unknown 0.139 -0.006
27 245758_at AT1G32240 KAN2, KANADI 2 0.134 -0.269
28 261502_at AT1G14440 AtHB31, homeobox protein 31, FTM2, FLORAL TRANSITION AT THE MERISTEM2, HB31, homeobox protein 31, ZHD4, ZINC FINGER HOMEODOMAIN 4 0.133 -0.174
29 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.133 0.635
30 257140_at AT3G28910 ATMYB30, MYB30, myb domain protein 30 0.127 0.099
31 259042_at AT3G03450 RGL2, RGA-like 2 0.123 -0.341
32 267222_at AT2G43880 [Pectin lyase-like superfamily protein] 0.123 0.034
33 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 0.120 -0.342
34 249411_at AT5G40390 RS5, raffinose synthase 5, SIP1, seed imbibition 1-like 0.119 0.190
35 259976_at AT1G76560 CP12-3, CP12 domain-containing protein 3 0.116 0.413
36 256099_at AT1G13710 CYP78A5, cytochrome P450, family 78, subfamily A, polypeptide 5, KLU, KLUH 0.116 0.047
37 259949_at AT1G71420 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.116 -0.024
38 253655_at AT4G30070 LCR59, low-molecular-weight cysteine-rich 59 0.116 0.066
39 248183_at AT5G54040 [Cysteine/Histidine-rich C1 domain family protein] 0.115 -0.009
40 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.114 -0.416
41 247954_at AT5G56870 BGAL4, beta-galactosidase 4 0.113 0.359
42 249211_at AT5G42680 unknown 0.112 -0.300
43 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 -0.847 -0.043
44 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 -0.711 -0.259
45 266912_at AT2G45900 TRM13, TON1 Recruiting Motif 13 -0.672 -0.271
46 261768_at AT1G15550 ATGA3OX1, ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA3OX1, gibberellin 3-oxidase 1, GA4, GA REQUIRING 4 -0.603 -0.257
47 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.567 0.603
48 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 -0.553 0.046
49 251200_at AT3G63010 ATGID1B, GID1B, GA INSENSITIVE DWARF1B -0.497 0.416
50 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 -0.496 -0.500
51 260883_at AT1G29270 unknown -0.460 -0.047
52 266479_at AT2G31160 LSH3, LIGHT SENSITIVE HYPOCOTYLS 3, OBO1, ORGAN BOUNDARY 1 -0.450 -0.208
53 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.445 -0.689
54 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 -0.417 -0.002
55 246929_at AT5G25210 unknown -0.417 0.213
56 245341_at AT4G16447 unknown -0.410 -0.223
57 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 -0.382 -0.148
58 255900_at AT1G17830 unknown -0.379 0.208
59 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 -0.377 0.861
60 261375_at AT1G53160 FTM6, FLORAL TRANSITION AT THE MERISTEM6, SPL4, squamosa promoter binding protein-like 4 -0.364 0.071
61 248759_at AT5G47610 [RING/U-box superfamily protein] -0.345 -0.733
62 263325_at AT2G04240 XERICO -0.331 -0.043
63 263829_at AT2G40435 unknown -0.325 0.488
64 263963_at AT2G36080 ABS2, ABNORMAL SHOOT 2, NGAL1, NGATHA-Like 1 -0.324 0.581
65 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.323 -0.087
66 256024_at AT1G58340 BCD1, BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRZ, ZRIZI -0.319 0.570
67 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.317 -0.918
68 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE -0.305 -0.319
69 265249_at AT2G01940 ATIDD15, ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SGR5, SHOOT GRAVITROPISM 5 -0.296 -0.166
70 247212_at AT5G65040 unknown -0.295 -0.149
71 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 -0.293 0.140
72 255285_at AT4G04630 unknown -0.291 -0.143
73 266124_at AT2G45080 cycp3;1, cyclin p3;1 -0.286 -0.042
74 259302_at AT3G05120 ATGID1A, GA INSENSITIVE DWARF1A, GID1A, GA INSENSITIVE DWARF1A -0.283 0.042
75 245662_at AT1G28190 unknown -0.281 0.806
76 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.267 -0.188
77 254293_at AT4G23060 IQD22, IQ-domain 22 -0.265 0.328
78 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -0.265 -0.143
79 265345_at AT2G22680 WAVH1, WAV3 homolog 1 -0.265 0.109
80 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.259 -0.376
81 253722_at AT4G29190 AtC3H49, AtOZF2, Arabidopsis thaliana oxidation-related zinc finger 2, AtTZF3, OZF2, oxidation-related zinc finger 2, TZF3, tandem zinc finger 3 -0.254 0.263
82 260601_at AT1G55910 ZIP11, zinc transporter 11 precursor -0.253 -0.169
83 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.244 -0.016