4.0:Information of module
roots IAA
In comparison with Fe starvation 72 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006220 pyrimidine nucleotide metabolic process BP 5.736e-13
GO:0006221 pyrimidine nucleotide biosynthetic proce... BP 5.736e-13
GO:0072594 establishment of protein localization to... BP 8.364e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010817 regulation of hormone levels BP 1.249e-07
GO:0010167 response to nitrate BP 1.397e-07
GO:0015706 nitrate transport BP 1.426e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
roots IAA		 Log2 signal ratio
Fe starvation 72 h
1 259735_at AT1G64405 unknown 0.970 0.259
2 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 0.889 0.238
3 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 0.852 0.135
4 266611_at AT2G14960 GH3.1 0.835 0.162
5 245076_at AT2G23170 GH3.3 0.792 0.721
6 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 0.744 0.132
7 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 0.718 0.266
8 253047_at AT4G37295 unknown 0.619 -0.026
9 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.595 -0.015
10 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 0.552 0.566
11 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 0.538 -0.075
12 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.535 0.125
13 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.518 0.267
14 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.489 0.202
15 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.466 0.348
16 259027_at AT3G09280 unknown 0.445 0.040
17 251612_at AT3G57950 unknown 0.440 0.095
18 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.436 0.291
19 253908_at AT4G27260 GH3.5, WES1 0.435 -0.007
20 251751_at AT3G55720 unknown 0.428 0.390
21 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.425 0.609
22 253070_at AT4G37850 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.391 -0.248
23 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 0.387 0.441
24 263576_at AT2G17080 unknown 0.387 0.289
25 263436_at AT2G28690 unknown 0.385 0.185
26 248763_at AT5G47550 [Cystatin/monellin superfamily protein] 0.379 0.105
27 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 0.372 -0.013
28 267250_at AT2G23060 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.365 -0.021
29 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.350 -0.082
30 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.349 0.037
31 246992_at AT5G67430 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.345 0.513
32 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.326 -0.089
33 266908_at AT2G34650 ABR, ABRUPTUS, PID, PINOID 0.309 0.209
34 265955_at AT2G37280 ABCG33, ATP-binding cassette G33, ATPDR5, PLEIOTROPIC DRUG RESISTANCE 5, PDR5, pleiotropic drug resistance 5 0.298 0.244
35 263363_at AT2G03850 [Late embryogenesis abundant protein (LEA) family protein] 0.294 -0.069
36 263360_at AT2G03830 GLV6, GOLVEN 6, RGF8, root meristem growth factor 8 0.293 0.186
37 246576_at AT1G31650 ATROPGEF14, ROPGEF14, ROP (rho of plants) guanine nucleotide exchange factor 14 0.284 0.279
38 266507_at AT2G47860 SETH6 0.282 0.028
39 267075_at AT2G41070 ATBZIP12, DPBF4, EEL, ENHANCED EM LEVEL 0.282 0.280
40 259729_at AT1G77640 [Integrase-type DNA-binding superfamily protein] 0.277 0.075
41 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.275 0.319
42 245416_at AT4G17350 unknown 0.273 -0.064
43 258718_at AT3G09760 [RING/U-box superfamily protein] 0.272 0.091
44 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.270 0.306
45 252638_at AT3G44540 FAR4, fatty acid reductase 4 0.269 0.397
46 258878_at AT3G03170 unknown 0.266 0.175
47 247151_at AT5G65640 bHLH093, beta HLH protein 93 0.266 0.150
48 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 0.263 0.419
49 262971_at AT1G75640 [Leucine-rich receptor-like protein kinase family protein] 0.257 -0.049
50 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 0.256 0.168
51 263931_at AT2G36220 unknown 0.244 0.187
52 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 0.229 0.086
53 247953_at AT5G57260 CYP71B10, cytochrome P450, family 71, subfamily B, polypeptide 10 0.222 -0.093
54 256030_at AT1G34110 [Leucine-rich receptor-like protein kinase family protein] 0.221 0.155
55 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.221 0.267
56 250091_at AT5G17340 [Putative membrane lipoprotein] 0.221 -0.035
57 262303_at AT1G70920 ATHB18, homeobox-leucine zipper protein 18, HB18, homeobox-leucine zipper protein 18 0.220 0.057
58 253049_at AT4G37300 MEE59, maternal effect embryo arrest 59 0.214 -0.142
59 262263_at AT1G70940 ATPIN3, ARABIDOPSIS PIN-FORMED 3, PIN3, PIN-FORMED 3 0.206 0.011
60 256018_at AT1G58300 HO4, heme oxygenase 4 0.205 -0.058
61 258253_at AT3G26760 [NAD(P)-binding Rossmann-fold superfamily protein] 0.202 -0.100
62 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.201 0.570
63 251925_at AT3G54000 unknown 0.199 0.160
64 254983_at AT4G10560 MEE53, maternal effect embryo arrest 53 0.196 -0.119
65 245141_at AT2G45400 BEN1, BRI1-5 ENHANCED 1 0.195 0.096
66 261427_at AT1G18670 IBS1, IMPAIRED IN BABA-INDUCED STERILITY 1 0.192 0.236
67 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.191 -0.418
68 262108_at AT1G02740 [MRG family protein] 0.191 0.051
69 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.190 0.375
70 250728_at AT5G06440 unknown 0.190 -0.043
71 261491_at AT1G14350 AtMYB124, myb domain protein 124, FLP, FOUR LIPS, MYB124 0.180 -0.140
72 250762_at AT5G05990 [Mitochondrial glycoprotein family protein] 0.180 0.007
73 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.179 0.176
74 259268_at AT3G01070 AtENODL16, ENODL16, early nodulin-like protein 16 0.178 -0.027
75 249109_at AT5G43700 ATAUX2-11, AUXIN INDUCIBLE 2-11, IAA4, indole-3-acetic acid inducible 4 0.177 0.210
76 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.177 0.144
77 266663_at AT2G25790 SKM1, STERILITY-REGULATING KINASE MEMBER 1 0.176 0.257
78 252786_at AT3G42670 CHR38, chromatin remodeling 38, CLSY, CLASSY1, CLSY1, CLASSY 1 0.170 -0.095
79 264775_at AT1G22880 ATCEL5, ARABIDOPSIS THALIANA CELLULASE 5, ATGH9B4, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4, CEL5, cellulase 5 0.168 -0.438
80 259091_at AT3G04890 [Uncharacterized conserved protein (DUF2358)] 0.165 -0.069
81 262056_at AT1G80245 [Spc97 / Spc98 family of spindle pole body (SBP) component] 0.165 0.311
82 264471_at AT1G67120 AtMDN1, MDN1, MIDASIN 1 0.164 0.311
83 254949_at AT4G11020 unknown -0.410 -0.159
84 257720_at AT3G18450 [PLAC8 family protein] -0.361 -0.656
85 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.326 -0.634
86 255608_at AT4G01140 unknown -0.303 -0.283
87 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 -0.259 0.831
88 249768_at AT5G24100 [Leucine-rich repeat protein kinase family protein] -0.248 -0.248
89 260752_at AT1G49030 [PLAC8 family protein] -0.244 -0.271
90 251771_at AT3G56000 ATCSLA14, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A14, CSLA14, cellulose synthase like A14 -0.240 -0.297
91 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 -0.236 -0.554
92 254606_at AT4G19030 AT-NLM1, ATNLM1, NOD26-LIKE MAJOR INTRINSIC PROTEIN 1, NIP1;1, NOD26-LIKE INTRINSIC PROTEIN 1;1, NLM1, NOD26-like major intrinsic protein 1 -0.233 -0.319
93 265134_at AT1G51260 LPAT3, lysophosphatidyl acyltransferase 3 -0.231 -0.014
94 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 -0.225 -0.368
95 254294_at AT4G23070 ATRBL7, RHOMBOID-like protein 7, RBL7, RHOMBOID-like protein 7 -0.215 -0.310
96 252217_at AT3G50140 unknown -0.210 -0.008
97 263470_at AT2G31900 ATMYO5, MYOSIN 5, ATXIF, MYOSIN XI F, XIF, myosin-like protein XIF -0.210 -0.082
98 246011_at AT5G08330 AtTCP11, TCP11, TCP domain protein 11 -0.205 -0.347
99 256275_at AT3G12110 ACT11, actin-11 -0.203 -0.432
100 258912_at AT3G06460 [GNS1/SUR4 membrane protein family] -0.199 -0.269
101 251116_at AT3G63470 scpl40, serine carboxypeptidase-like 40 -0.196 -0.569
102 258013_at AT3G19320 [Leucine-rich repeat (LRR) family protein] -0.195 -0.089
103 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.191 -0.854
104 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 -0.188 -0.278
105 262134_at AT1G77990 AST56, SULTR2;2, SULPHATE TRANSPORTER 2;2 -0.187 -0.325
106 252302_at AT3G49190 [O-acyltransferase (WSD1-like) family protein] -0.185 -0.260
107 265246_at AT2G43050 ATPMEPCRD -0.185 -0.422
108 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.184 -0.924
109 258901_at AT3G05640 [Protein phosphatase 2C family protein] -0.181 -0.029
110 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 -0.180 -0.125
111 264909_at AT2G17300 unknown -0.178 -0.280
112 266191_at AT2G39040 [Peroxidase superfamily protein] -0.175 -0.732
113 251060_at AT5G01820 ATCIPK14, ATSR1, serine/threonine protein kinase 1, CIPK14, CBL-INTERACTING PROTEIN KINASE 14, PKS24, SOS2-like protein kinase 24, SnRK3.15, SNF1-RELATED PROTEIN KINASE 3.15, SR1, serine/threonine protein kinase 1 -0.174 0.078
114 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 -0.172 -0.616
115 263915_at AT2G36430 unknown -0.171 0.195
116 253957_at AT4G26320 AGP13, arabinogalactan protein 13 -0.171 -0.526
117 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.171 0.198
118 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 -0.169 -0.453
119 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] -0.166 0.002
120 261926_at AT1G22530 PATL2, PATELLIN 2 -0.165 -0.299
121 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.163 -0.202
122 248343_at AT5G52260 AtMYB19, myb domain protein 19, MYB19, myb domain protein 19 -0.161 0.043
123 255517_at AT4G02290 AtGH9B13, glycosyl hydrolase 9B13, GH9B13, glycosyl hydrolase 9B13 -0.158 -0.229
124 264598_at AT1G04610 YUC3, YUCCA 3 -0.158 -0.308
125 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 -0.158 -0.344
126 256968_at AT3G21070 ATNADK-1, NAD KINASE 1, NADK1, NAD kinase 1 -0.157 0.114
127 252523_at AT3G46400 [Leucine-rich repeat protein kinase family protein] -0.156 -0.129
128 249718_at AT5G35740 [Carbohydrate-binding X8 domain superfamily protein] -0.155 -0.192
129 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 -0.155 -0.398
130 251143_at AT5G01220 SQD2, sulfoquinovosyldiacylglycerol 2 -0.151 -0.360
131 254324_at AT4G22640 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.149 -0.452
132 258528_at AT3G06770 [Pectin lyase-like superfamily protein] -0.148 -0.218
133 262385_at AT1G72960 [Root hair defective 3 GTP-binding protein (RHD3)] -0.146 -0.046
134 252536_at AT3G45700 [Major facilitator superfamily protein] -0.145 -0.773
135 254785_at AT4G12730 FLA2, FASCICLIN-like arabinogalactan 2 -0.143 -0.249
136 263226_at AT1G30690 [Sec14p-like phosphatidylinositol transfer family protein] -0.141 -0.221
137 252692_at AT3G43960 [Cysteine proteinases superfamily protein] -0.140 -0.683
138 248203_at AT5G54230 AtMYB49, myb domain protein 49, MYB49, myb domain protein 49 -0.139 -0.016
139 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.139 -0.804
140 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.138 -0.270
141 265066_at AT1G03870 FLA9, FASCICLIN-like arabinoogalactan 9 -0.138 -0.298
142 248406_at AT5G51490 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.137 -0.345
143 251723_at AT3G56230 [BTB/POZ domain-containing protein] -0.137 -0.384
144 254175_at AT4G24050 [NAD(P)-binding Rossmann-fold superfamily protein] -0.135 -0.020
145 264375_at AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 -0.135 -0.089
146 247586_at AT5G60660 PIP2;4, plasma membrane intrinsic protein 2;4, PIP2F -0.134 -0.586
147 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.132 0.025
148 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 -0.129 -0.266
149 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.129 -0.101
150 267209_at AT2G30930 unknown -0.127 -0.359
151 266444_at AT2G43150 [Proline-rich extensin-like family protein] -0.127 -0.152
152 267318_at AT2G34770 ATFAH1, ARABIDOPSIS FATTY ACID HYDROXYLASE 1, FAH1, fatty acid hydroxylase 1 -0.126 -0.229
153 261745_at AT1G08500 AtENODL18, ENODL18, early nodulin-like protein 18 -0.125 -0.324
154 245776_at AT1G30260 unknown -0.124 -0.325
155 251857_at AT3G54770 ARP1, ABA-regulated RNA-binding protein 1 -0.124 -0.289
156 265481_at AT2G15960 unknown -0.124 -0.425
157 250745_at AT5G05850 PIRL1, plant intracellular ras group-related LRR 1 -0.122 -0.158
158 246429_at AT5G17450 HIPP21, heavy metal associated isoprenylated plant protein 21 -0.122 -0.066
159 251722_at AT3G56200 [Transmembrane amino acid transporter family protein] -0.122 -0.087
160 255506_at AT4G02130 GATL6, galacturonosyltransferase-like 6, LGT10 -0.121 -0.084
161 255005_at AT4G09990 GXM2, glucuronoxylan methyltransferase 2 -0.120 -0.432
162 266703_at AT2G19880 [Nucleotide-diphospho-sugar transferases superfamily protein] -0.120 -0.189
163 267199_at AT2G30990 unknown -0.120 -0.020