4.0:Information of module
aux1 mutant roots ethylene
In comparison with aerial organ callus inducing medium 48 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 1.885e-09
GO:1901700 response to oxygen-containing compound BP 2.338e-09
GO:0010033 response to organic substance BP 2.006e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006694 steroid biosynthetic process BP 2.457e-05
GO:0044711 single-organism biosynthetic process BP 2.719e-05
GO:0005975 carbohydrate metabolic process BP 3.148e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
aux1 mutant roots ethylene		 Log2 signal ratio
aerial organ callus inducing medium 48 h
1 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 1.011 0.346
2 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.866 0.887
3 246149_at AT5G19890 [Peroxidase superfamily protein] 0.798 0.636
4 251531_at AT3G58550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.790 0.378
5 265334_at AT2G18370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.740 0.574
6 259987_at AT1G75030 ATLP-3, thaumatin-like protein 3, TLP-3, thaumatin-like protein 3 0.709 0.284
7 249061_at AT5G44550 [Uncharacterised protein family (UPF0497)] 0.626 0.265
8 265341_at AT2G18360 [alpha/beta-Hydrolases superfamily protein] 0.615 0.442
9 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 0.597 0.495
10 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.540 0.510
11 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.540 0.197
12 260582_at AT2G47200 unknown 0.539 0.642
13 267472_at AT2G02850 ARPN, plantacyanin 0.535 0.231
14 245889_at AT5G09480 [hydroxyproline-rich glycoprotein family protein] 0.525 0.762
15 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.511 0.256
16 252988_at AT4G38410 [Dehydrin family protein] 0.511 0.272
17 262406_at AT1G34670 AtMYB93, myb domain protein 93, MYB93, myb domain protein 93 0.506 0.352
18 264788_at AT2G17880 DJC24, DNA J protein C24 0.495 -0.101
19 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 0.455 0.432
20 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.453 0.359
21 256415_at AT3G11210 [SGNH hydrolase-type esterase superfamily protein] 0.417 0.151
22 257927_at AT3G23240 ATERF1, ETHYLENE RESPONSE FACTOR 1, ERF1, ethylene response factor 1 0.412 0.336
23 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 0.411 0.164
24 255690_at AT4G00360 ATT1, ABERRANT INDUCTION OF TYPE THREE 1, CYP86A2, cytochrome P450, family 86, subfamily A, polypeptide 2 0.406 -0.073
25 247020_at AT5G67020 unknown 0.398 0.369
26 261640_at AT1G49960 [Xanthine/uracil permease family protein] 0.397 0.150
27 265084_at AT1G03790 AtTZF4, SOM, SOMNUS, TZF4, Tandem CCCH Zinc Finger protein 4 0.396 0.533
28 254474_at AT4G20390 [Uncharacterised protein family (UPF0497)] 0.394 0.327
29 264635_at AT1G65500 unknown 0.387 0.475
30 263436_at AT2G28690 unknown 0.381 0.640
31 263970_at AT2G42850 CYP718, cytochrome P450, family 718 0.363 0.030
32 254202_at AT4G24140 [alpha/beta-Hydrolases superfamily protein] 0.359 0.238
33 249576_at AT5G37690 [SGNH hydrolase-type esterase superfamily protein] 0.351 0.215
34 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 0.350 0.142
35 266893_at AT2G26070 AtRTE1, RTE1, REVERSION-TO-ETHYLENE SENSITIVITY1 0.346 0.160
36 255413_at AT4G03140 [NAD(P)-binding Rossmann-fold superfamily protein] 0.343 0.084
37 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 0.330 -0.052
38 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.313 1.116
39 267144_at AT2G38110 ATGPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6, GPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6 0.301 -0.043
40 260599_at AT1G55940 CYP708A1, cytochrome P450, family 708, subfamily A, polypeptide 1 0.293 0.235
41 261658_at AT1G50040 unknown 0.289 -0.025
42 253985_at AT4G26220 CCoAOMT7, caffeoyl coenzyme A ester O-methyltransferase 7 0.275 0.254
43 248090_at AT5G55090 MAPKKK15, mitogen-activated protein kinase kinase kinase 15 0.275 -0.028
44 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] 0.266 0.280
45 265014_at AT1G24430 [HXXXD-type acyl-transferase family protein] 0.262 0.510
46 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.250 -0.103
47 251555_at AT3G58780 AGL1, AGAMOUS-like 1, SHP1, SHATTERPROOF 1 0.248 0.113
48 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.246 0.183
49 261395_at AT1G79700 WRI4, WRINKLED 4 0.241 0.031
50 255814_at AT1G19900 [glyoxal oxidase-related protein] 0.235 -0.003
51 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.524 -0.631
52 247483_at AT5G62420 [NAD(P)-linked oxidoreductase superfamily protein] -0.515 0.028
53 245689_at AT5G04120 [Phosphoglycerate mutase family protein] -0.492 0.429
54 264892_at AT1G23160 [Auxin-responsive GH3 family protein] -0.462 -0.006
55 254949_at AT4G11020 unknown -0.448 -0.045
56 247476_at AT5G62330 unknown -0.405 0.080
57 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.336 0.274
58 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 -0.326 -0.366
59 264775_at AT1G22880 ATCEL5, ARABIDOPSIS THALIANA CELLULASE 5, ATGH9B4, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4, CEL5, cellulase 5 -0.316 0.487
60 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 -0.304 0.037
61 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 -0.287 0.201
62 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.286 -0.091
63 245728_at AT1G73340 [Cytochrome P450 superfamily protein] -0.278 0.070
64 262373_at AT1G73120 unknown -0.278 0.360
65 258629_at AT3G02850 SKOR, STELAR K+ outward rectifier -0.269 -0.134
66 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.264 -0.324
67 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.253 -0.137
68 266403_at AT2G38600 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.249 -0.020
69 263465_at AT2G31940 unknown -0.245 -0.112
70 247074_at AT5G66590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.243 0.079
71 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.242 -0.000
72 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.230 -0.053
73 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.229 -0.036
74 249406_at AT5G40210 UMAMIT42, Usually multiple acids move in and out Transporters 42 -0.229 0.292
75 247477_at AT5G62340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.226 -0.146
76 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.225 -0.389
77 262010_at AT1G35612 [expressed protein] -0.224 -0.137
78 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.224 -0.285
79 267216_at AT2G02620 [Cysteine/Histidine-rich C1 domain family protein] -0.223 -0.041
80 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.213 -0.050
81 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.208 0.112
82 259576_at AT1G35330 [RING/U-box superfamily protein] -0.205 -0.058
83 266596_at AT2G46150 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.203 0.493
84 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.202 -0.072
85 259753_at AT1G71050 HIPP20, heavy metal associated isoprenylated plant protein 20 -0.198 -0.180
86 265924_at AT2G18620 [Terpenoid synthases superfamily protein] -0.197 -0.005
87 251023_at AT5G02170 [Transmembrane amino acid transporter family protein] -0.195 0.077
88 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.195 -0.096
89 256508_at AT1G75140 unknown -0.188 0.045
90 253573_at AT4G31020 [alpha/beta-Hydrolases superfamily protein] -0.184 -0.048
91 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] -0.181 0.377
92 249832_at AT5G23400 [Leucine-rich repeat (LRR) family protein] -0.177 -0.081
93 263238_at AT2G16580 SAUR8, SMALL AUXIN UPREGULATED RNA 8 -0.175 0.273
94 251281_at AT3G61640 AGP20, arabinogalactan protein 20, AtAGP20, Arabinogalactan protein 20 -0.173 -0.126
95 262516_at AT1G17190 ATGSTU26, glutathione S-transferase tau 26, GSTU26, glutathione S-transferase tau 26 -0.171 -0.153
96 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 -0.170 -0.311
97 250145_at AT5G14690 unknown -0.169 0.056
98 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -0.168 1.054
99 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 -0.167 0.010