4.0:Information of module
aux1 mutant roots ethylene
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009719 response to endogenous stimulus BP 1.885e-09
GO:1901700 response to oxygen-containing compound BP 2.338e-09
GO:0010033 response to organic substance BP 2.006e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006694 steroid biosynthetic process BP 2.457e-05
GO:0044711 single-organism biosynthetic process BP 2.719e-05
GO:0005975 carbohydrate metabolic process BP 3.148e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
aux1 mutant roots ethylene		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 1.011 0.206
2 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.866 1.417
3 246149_at AT5G19890 [Peroxidase superfamily protein] 0.798 -0.951
4 251531_at AT3G58550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.790 -0.329
5 265334_at AT2G18370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.740 -1.080
6 259987_at AT1G75030 ATLP-3, thaumatin-like protein 3, TLP-3, thaumatin-like protein 3 0.709 -0.354
7 249061_at AT5G44550 [Uncharacterised protein family (UPF0497)] 0.626 -0.681
8 265341_at AT2G18360 [alpha/beta-Hydrolases superfamily protein] 0.615 -0.296
9 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 0.597 -0.791
10 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.540 1.129
11 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.540 0.249
12 260582_at AT2G47200 unknown 0.539 0.173
13 267472_at AT2G02850 ARPN, plantacyanin 0.535 1.294
14 245889_at AT5G09480 [hydroxyproline-rich glycoprotein family protein] 0.525 -0.907
15 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.511 -0.705
16 252988_at AT4G38410 [Dehydrin family protein] 0.511 0.724
17 262406_at AT1G34670 AtMYB93, myb domain protein 93, MYB93, myb domain protein 93 0.506 -0.693
18 264788_at AT2G17880 DJC24, DNA J protein C24 0.495 -0.541
19 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 0.455 -0.260
20 265948_at AT2G19590 ACO1, ACC oxidase 1, ATACO1 0.453 0.672
21 256415_at AT3G11210 [SGNH hydrolase-type esterase superfamily protein] 0.417 -0.312
22 257927_at AT3G23240 ATERF1, ETHYLENE RESPONSE FACTOR 1, ERF1, ethylene response factor 1 0.412 0.205
23 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 0.411 -0.015
24 255690_at AT4G00360 ATT1, ABERRANT INDUCTION OF TYPE THREE 1, CYP86A2, cytochrome P450, family 86, subfamily A, polypeptide 2 0.406 0.551
25 247020_at AT5G67020 unknown 0.398 0.254
26 261640_at AT1G49960 [Xanthine/uracil permease family protein] 0.397 0.057
27 265084_at AT1G03790 AtTZF4, SOM, SOMNUS, TZF4, Tandem CCCH Zinc Finger protein 4 0.396 -0.061
28 254474_at AT4G20390 [Uncharacterised protein family (UPF0497)] 0.394 0.067
29 264635_at AT1G65500 unknown 0.387 0.205
30 263436_at AT2G28690 unknown 0.381 0.116
31 263970_at AT2G42850 CYP718, cytochrome P450, family 718 0.363 0.088
32 254202_at AT4G24140 [alpha/beta-Hydrolases superfamily protein] 0.359 -0.721
33 249576_at AT5G37690 [SGNH hydrolase-type esterase superfamily protein] 0.351 -0.396
34 261470_at AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 0.350 -0.381
35 266893_at AT2G26070 AtRTE1, RTE1, REVERSION-TO-ETHYLENE SENSITIVITY1 0.346 0.698
36 255413_at AT4G03140 [NAD(P)-binding Rossmann-fold superfamily protein] 0.343 1.139
37 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 0.330 0.475
38 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 0.313 0.081
39 267144_at AT2G38110 ATGPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6, GPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6 0.301 -0.933
40 260599_at AT1G55940 CYP708A1, cytochrome P450, family 708, subfamily A, polypeptide 1 0.293 -0.614
41 261658_at AT1G50040 unknown 0.289 -0.077
42 253985_at AT4G26220 CCoAOMT7, caffeoyl coenzyme A ester O-methyltransferase 7 0.275 -0.952
43 248090_at AT5G55090 MAPKKK15, mitogen-activated protein kinase kinase kinase 15 0.275 -0.877
44 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] 0.266 0.928
45 265014_at AT1G24430 [HXXXD-type acyl-transferase family protein] 0.262 -0.699
46 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.250 1.278
47 251555_at AT3G58780 AGL1, AGAMOUS-like 1, SHP1, SHATTERPROOF 1 0.248 -0.506
48 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.246 0.084
49 261395_at AT1G79700 WRI4, WRINKLED 4 0.241 -0.971
50 255814_at AT1G19900 [glyoxal oxidase-related protein] 0.235 -0.866
51 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.524 -0.553
52 247483_at AT5G62420 [NAD(P)-linked oxidoreductase superfamily protein] -0.515 -1.041
53 245689_at AT5G04120 [Phosphoglycerate mutase family protein] -0.492 -0.212
54 264892_at AT1G23160 [Auxin-responsive GH3 family protein] -0.462 -0.919
55 254949_at AT4G11020 unknown -0.448 -1.243
56 247476_at AT5G62330 unknown -0.405 -0.558
57 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.336 0.134
58 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 -0.326 0.331
59 264775_at AT1G22880 ATCEL5, ARABIDOPSIS THALIANA CELLULASE 5, ATGH9B4, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4, CEL5, cellulase 5 -0.316 -0.474
60 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 -0.304 0.744
61 253100_at AT4G37400 CYP81F3, cytochrome P450, family 81, subfamily F, polypeptide 3 -0.287 0.470
62 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.286 -0.906
63 245728_at AT1G73340 [Cytochrome P450 superfamily protein] -0.278 -0.226
64 262373_at AT1G73120 unknown -0.278 0.762
65 258629_at AT3G02850 SKOR, STELAR K+ outward rectifier -0.269 -0.232
66 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.264 -0.578
67 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.253 -0.010
68 266403_at AT2G38600 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.249 -0.700
69 263465_at AT2G31940 unknown -0.245 -0.484
70 247074_at AT5G66590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.243 0.753
71 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.242 -1.103
72 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.230 0.055
73 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.229 -1.086
74 249406_at AT5G40210 UMAMIT42, Usually multiple acids move in and out Transporters 42 -0.229 -0.499
75 247477_at AT5G62340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.226 0.144
76 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.225 -0.792
77 262010_at AT1G35612 [expressed protein] -0.224 0.040
78 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.224 0.163
79 267216_at AT2G02620 [Cysteine/Histidine-rich C1 domain family protein] -0.223 -0.079
80 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.213 -0.882
81 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.208 -0.416
82 259576_at AT1G35330 [RING/U-box superfamily protein] -0.205 -0.284
83 266596_at AT2G46150 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.203 -0.401
84 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.202 -0.148
85 259753_at AT1G71050 HIPP20, heavy metal associated isoprenylated plant protein 20 -0.198 -0.421
86 265924_at AT2G18620 [Terpenoid synthases superfamily protein] -0.197 0.500
87 251023_at AT5G02170 [Transmembrane amino acid transporter family protein] -0.195 0.484
88 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.195 -0.868
89 256508_at AT1G75140 unknown -0.188 0.125
90 253573_at AT4G31020 [alpha/beta-Hydrolases superfamily protein] -0.184 -0.412
91 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] -0.181 -1.015
92 249832_at AT5G23400 [Leucine-rich repeat (LRR) family protein] -0.177 -0.569
93 263238_at AT2G16580 SAUR8, SMALL AUXIN UPREGULATED RNA 8 -0.175 -0.545
94 251281_at AT3G61640 AGP20, arabinogalactan protein 20, AtAGP20, Arabinogalactan protein 20 -0.173 0.250
95 262516_at AT1G17190 ATGSTU26, glutathione S-transferase tau 26, GSTU26, glutathione S-transferase tau 26 -0.171 0.972
96 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 -0.170 0.343
97 250145_at AT5G14690 unknown -0.169 -0.360
98 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -0.168 -0.365
99 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 -0.167 0.980