4.0:Information of module
aux1 mutant roots air
In comparison with root cells epidermis 140mM NaCl 32 hours help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006810 transport BP 5.449e-10
GO:0051234 establishment of localization BP 6.591e-10
GO:1901700 response to oxygen-containing compound BP 9.619e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 8.424e-11
GO:0009719 response to endogenous stimulus BP 5.876e-08
GO:0009725 response to hormone BP 6.020e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
aux1 mutant roots air		 Log2 signal ratio
root cells epidermis 140mM NaCl 32 hours
1 254098_at AT4G25100 ATFSD1, ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, FSD1, Fe superoxide dismutase 1 1.138 0.207
2 254949_at AT4G11020 unknown 0.622 -0.577
3 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.558 -0.107
4 252502_at AT3G46900 COPT2, copper transporter 2 0.545 -0.127
5 266996_at AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 0.522 -0.089
6 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.512 -0.229
7 259987_at AT1G75030 ATLP-3, thaumatin-like protein 3, TLP-3, thaumatin-like protein 3 0.503 -0.171
8 248316_at AT5G52670 [Copper transport protein family] 0.435 0.025
9 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] 0.415 -0.020
10 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.412 0.153
11 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.399 0.034
12 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.393 -0.210
13 265014_at AT1G24430 [HXXXD-type acyl-transferase family protein] 0.386 -0.151
14 259653_at AT1G55240 unknown 0.376 -0.216
15 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 0.376 -0.099
16 263915_at AT2G36430 unknown 0.371 -0.576
17 257720_at AT3G18450 [PLAC8 family protein] 0.367 -0.958
18 245689_at AT5G04120 [Phosphoglycerate mutase family protein] 0.367 0.326
19 265543_at AT2G28270 [Cysteine/Histidine-rich C1 domain family protein] 0.367 -0.139
20 254324_at AT4G22640 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.360 -0.369
21 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.352 -0.626
22 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.349 -0.655
23 245889_at AT5G09480 [hydroxyproline-rich glycoprotein family protein] 0.337 -0.082
24 264403_at AT2G25150 [HXXXD-type acyl-transferase family protein] 0.336 0.036
25 264375_at AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 0.330 -0.075
26 260067_at AT1G73780 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.330 -0.058
27 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.316 -0.113
28 255608_at AT4G01140 unknown 0.316 -0.957
29 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.313 -0.106
30 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 0.305 -0.144
31 262304_at AT1G70890 MLP43, MLP-like protein 43 0.304 -0.081
32 258905_at AT3G06390 [Uncharacterised protein family (UPF0497)] 0.299 -0.012
33 266396_at AT2G38790 unknown 0.297 -0.072
34 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 0.280 -0.782
35 265246_at AT2G43050 ATPMEPCRD 0.278 -0.359
36 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.277 -0.362
37 257348_at AT2G42140 [VQ motif-containing protein] 0.277 -0.235
38 251079_at AT5G02000 unknown 0.273 -0.333
39 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] 0.265 -0.048
40 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 0.265 0.169
41 255407_at AT4G03480 [Ankyrin repeat family protein] 0.263 -0.247
42 254938_at AT4G10770 ATOPT7, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 7, OPT7, oligopeptide transporter 7 0.262 -0.606
43 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 0.257 -0.366
44 266344_at AT2G01580 unknown 0.251 -0.101
45 246011_at AT5G08330 AtTCP11, TCP11, TCP domain protein 11 0.251 -0.576
46 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 0.248 0.010
47 265817_at AT2G18050 HIS1-3, histone H1-3 0.240 -0.062
48 262580_at AT1G15330 [Cystathionine beta-synthase (CBS) protein] 0.239 0.167
49 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A 0.237 -0.580
50 256275_at AT3G12110 ACT11, actin-11 0.237 -0.384
51 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.235 -0.094
52 247678_at AT5G59520 AtZIP2, ZIP2, ZRT/IRT-like protein 2 0.235 -0.245
53 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 0.232 -0.938
54 267042_at AT2G34320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.230 -0.153
55 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.224 -0.301
56 252236_at AT3G49930 [C2H2 and C2HC zinc fingers superfamily protein] 0.223 -0.570
57 247205_at AT5G64890 PROPEP2, elicitor peptide 2 precursor 0.222 0.020
58 258241_at AT3G27650 LBD25, LOB domain-containing protein 25 0.221 -0.279
59 263616_at AT2G04680 [Cysteine/Histidine-rich C1 domain family protein] 0.220 -1.012
60 245528_at AT4G15530 PPDK, pyruvate orthophosphate dikinase 0.215 0.244
61 263919_at AT2G36470 unknown 0.212 -0.144
62 262533_at AT1G17090 unknown 0.212 -0.571
63 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 0.212 0.009
64 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 0.211 0.042
65 247586_at AT5G60660 PIP2;4, plasma membrane intrinsic protein 2;4, PIP2F 0.207 -0.407
66 264434_at AT1G10340 [Ankyrin repeat family protein] 0.207 -0.044
67 252862_at AT4G39830 [Cupredoxin superfamily protein] 0.205 0.452
68 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 0.204 -0.949
69 252536_at AT3G45700 [Major facilitator superfamily protein] 0.203 -0.112
70 261308_at AT1G48480 RKL1, receptor-like kinase 1 0.201 -0.643
71 251401_at AT3G60270 [Cupredoxin superfamily protein] 0.200 -0.087
72 252987_at AT4G38390 RHS17, root hair specific 17 0.199 -0.505
73 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] 0.199 -0.255
74 253957_at AT4G26320 AGP13, arabinogalactan protein 13 0.196 -0.390
75 254344_at AT4G22110 [GroES-like zinc-binding dehydrogenase family protein] 0.195 -0.352
76 265124_at AT1G55430 [Cysteine/Histidine-rich C1 domain family protein] 0.195 -0.964
77 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] 0.193 -0.161
78 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.192 -0.037
79 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] 0.190 -0.143
80 245034_at AT2G26390 [Serine protease inhibitor (SERPIN) family protein] 0.188 0.365
81 267209_at AT2G30930 unknown 0.188 -0.572
82 252217_at AT3G50140 unknown 0.188 -0.825
83 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 0.185 -0.255
84 267367_at AT2G44210 unknown 0.184 -0.236
85 256600_at AT3G14850 TBL41, TRICHOME BIREFRINGENCE-LIKE 41 0.184 -0.593
86 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.183 -0.010
87 259854_at AT1G72200 [RING/U-box superfamily protein] 0.182 -0.654
88 252594_at AT3G45680 [Major facilitator superfamily protein] 0.181 -0.080
89 251744_at AT3G56010 unknown 0.181 0.186
90 257670_at AT3G20340 unknown 0.181 0.011
91 266611_at AT2G14960 GH3.1 -0.953 -0.308
92 267411_at AT2G34930 [disease resistance family protein / LRR family protein] -0.843 0.256
93 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 -0.727 -0.053
94 255695_at AT4G00080 UNE11, unfertilized embryo sac 11 -0.718 -0.002
95 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 -0.715 -0.065
96 245076_at AT2G23170 GH3.3 -0.653 -0.525
97 259735_at AT1G64405 unknown -0.637 -0.002
98 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.605 -0.152
99 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.601 0.642
100 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 -0.569 -0.164
101 253047_at AT4G37295 unknown -0.563 -0.179
102 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] -0.544 -0.132
103 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -0.534 0.081
104 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 -0.473 -0.196
105 257026_at AT3G19200 unknown -0.466 0.361
106 247151_at AT5G65640 bHLH093, beta HLH protein 93 -0.466 0.062
107 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 -0.464 -0.098
108 263575_at AT2G17070 unknown -0.444 -0.221
109 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] -0.443 -0.187
110 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 -0.441 -0.711
111 245567_at AT4G14630 GLP9, germin-like protein 9 -0.439 0.432
112 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 -0.422 0.228
113 259027_at AT3G09280 unknown -0.407 -0.163
114 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 -0.383 0.392
115 257386_at AT2G42440 ASL15, ASYMMETRIC LEAVES 2-like 15, LBD17, LOB domain-containing protein 17 -0.358 -0.158
116 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 -0.346 0.117
117 244936_at ATCG01100 NDHA -0.336 0.288
118 260394_at AT1G74080 ATMYB122, MYB DOMAIN PROTEIN 122, MYB122, myb domain protein 122 -0.335 -0.222
119 246798_at AT5G26930 GATA23, GATA transcription factor 23 -0.332 -0.004
120 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 -0.325 -0.068
121 256702_at AT3G30380 [alpha/beta-Hydrolases superfamily protein] -0.321 0.089
122 253908_at AT4G27260 GH3.5, WES1 -0.320 -0.199
123 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 -0.309 -0.086
124 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.304 0.486
125 255658_at AT4G00770 TRM9, TON1 Recruiting Motif 9 -0.302 -0.036
126 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 -0.291 -0.268
127 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 -0.289 -0.052
128 249992_at AT5G18560 PUCHI -0.287 -0.126
129 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 -0.284 0.103
130 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.281 -0.098
131 247450_at AT5G62350 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.273 0.067
132 258718_at AT3G09760 [RING/U-box superfamily protein] -0.272 -0.298
133 265846_at AT2G35770 scpl28, serine carboxypeptidase-like 28 -0.269 -0.098
134 260528_at AT2G47260 ATWRKY23, WRKY DNA-BINDING PROTEIN 23, WRKY23, WRKY DNA-binding protein 23 -0.268 0.448
135 262001_at AT1G33790 [jacalin lectin family protein] -0.266 0.471
136 265828_at AT2G14520 unknown -0.255 0.049
137 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 -0.254 0.407
138 245141_at AT2G45400 BEN1, BRI1-5 ENHANCED 1 -0.253 -0.067
139 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.253 0.610
140 266507_at AT2G47860 SETH6 -0.251 -0.061
141 266908_at AT2G34650 ABR, ABRUPTUS, PID, PINOID -0.250 0.023
142 254020_at AT4G25700 B1, BCH1, BETA CAROTENOID HYDROXYLASE 1, BETA-OHASE 1, beta-hydroxylase 1, chy1 -0.249 -0.331
143 253180_at AT4G35210 unknown -0.249 -0.709
144 252133_at AT3G50900 unknown -0.242 0.057
145 247953_at AT5G57260 CYP71B10, cytochrome P450, family 71, subfamily B, polypeptide 10 -0.233 -0.033
146 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 -0.233 -0.074
147 254756_at AT4G13235 EDA21, embryo sac development arrest 21 -0.232 -0.194
148 255911_at AT1G66930 [Protein kinase superfamily protein] -0.232 -0.164
149 246488_at AT5G16010 [3-oxo-5-alpha-steroid 4-dehydrogenase family protein] -0.227 0.102
150 247074_at AT5G66590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.226 -0.000
151 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.225 0.059
152 264471_at AT1G67120 AtMDN1, MDN1, MIDASIN 1 -0.216 0.552
153 245416_at AT4G17350 unknown -0.214 -0.090
154 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A -0.213 -0.276
155 266269_at AT2G29480 ATGSTU2, glutathione S-transferase tau 2, GST20, GLUTATHIONE S-TRANSFERASE 20, GSTU2, glutathione S-transferase tau 2 -0.211 -0.028
156 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] -0.210 -0.135
157 247097_at AT5G66460 AtMAN7, MAN7, endo-beta-mannase 7 -0.208 -0.200
158 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.206 0.148
159 247802_at AT5G58580 ATL63, TOXICOS EN LEVADURA 63, TL63, TOXICOS EN LEVADURA 63 -0.205 -0.027
160 259426_at AT1G01470 LEA14, LATE EMBRYOGENESIS ABUNDANT 14, LSR3, LIGHT STRESS-REGULATED 3 -0.205 0.034
161 248205_at AT5G54300 unknown -0.204 -0.190
162 252305_at AT3G49240 emb1796, embryo defective 1796 -0.201 0.465
163 254667_at AT4G18280 [glycine-rich cell wall protein-related] -0.200 0.349
164 247178_at AT5G65205 [NAD(P)-binding Rossmann-fold superfamily protein] -0.196 0.226
165 261427_at AT1G18670 IBS1, IMPAIRED IN BABA-INDUCED STERILITY 1 -0.195 -0.041
166 260841_at AT1G29195 unknown -0.194 -0.091
167 256030_at AT1G34110 [Leucine-rich receptor-like protein kinase family protein] -0.194 -0.043
168 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.194 -0.175
169 263931_at AT2G36220 unknown -0.191 -0.001
170 255064_at AT4G08950 EXO, EXORDIUM -0.191 -0.013
171 262784_at AT1G10760 GWD, GWD1, SEX1, STARCH EXCESS 1, SOP, SOP1 -0.191 0.238
172 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.190 0.397
173 250091_at AT5G17340 [Putative membrane lipoprotein] -0.188 -0.040
174 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 -0.188 -0.021
175 260058_at AT1G78100 AUF1, auxin up-regulated f-box protein 1 -0.188 -0.463
176 261970_at AT1G65960 GAD2, glutamate decarboxylase 2 -0.186 -0.341
177 247944_at AT5G57100 [Nucleotide/sugar transporter family protein] -0.186 0.350
178 266663_at AT2G25790 SKM1, STERILITY-REGULATING KINASE MEMBER 1 -0.184 -0.065
179 259363_at AT1G13270 MAP1B, METHIONINE AMINOPEPTIDASE 1B, MAP1C, methionine aminopeptidase 1B -0.180 0.395