4.0:Information of module
2h KNO3 Whole root
In comparison with Cotyledons help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006875 cellular metal ion homeostasis BP 1.188e-03
GO:0055065 metal ion homeostasis BP 3.079e-03
GO:0098771 inorganic ion homeostasis BP 4.467e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0002831 regulation of response to biotic stimulu... BP 8.929e-04
GO:0032101 regulation of response to external stimu... BP 1.534e-03
GO:0006352 DNA-templated transcription, initiation BP 3.306e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2h KNO3 Whole root		 Log2 signal ratio
Cotyledons
1 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 0.593 -0.846
2 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B 0.559 -0.609
3 262516_at AT1G17190 ATGSTU26, glutathione S-transferase tau 26, GSTU26, glutathione S-transferase tau 26 0.522 0.140
4 267526_at AT2G30570 PSBW, photosystem II reaction center W 0.517 1.608
5 265204_at AT2G36650 unknown 0.440 0.011
6 255886_at AT1G20340 DRT112, DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112, PETE2, PLASTOCYANIN 2 0.393 1.322
7 260831_at AT1G06830 [Glutaredoxin family protein] 0.391 0.424
8 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.377 0.422
9 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 0.375 -0.173
10 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.343 0.982
11 249934_at AT5G22410 RHS18, root hair specific 18 0.336 0.214
12 248681_at AT5G48900 [Pectin lyase-like superfamily protein] 0.323 0.567
13 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 0.313 0.345
14 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.303 0.596
15 253440_at AT4G32570 TIFY8, TIFY domain protein 8 0.276 0.756
16 250034_at AT5G18280 APY2, apyrase 2, ATAPY2, apyrase 2 0.268 0.539
17 252442_at AT3G46940 DUT1, DUTP-PYROPHOSPHATASE-LIKE 1 0.264 0.066
18 260100_at AT1G73177 APC13, anaphase-promoting complex 13, BNS, BONSAI 0.251 -0.441
19 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 0.247 -0.215
20 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] 0.247 -0.301
21 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.247 0.260
22 260529_at AT2G47400 CP12, CP12 DOMAIN-CONTAINING PROTEIN 1, CP12-1, CP12 domain-containing protein 1 0.244 0.669
23 247074_at AT5G66590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.243 0.781
24 267093_at AT2G38170 ATCAX1, CAX1, cation exchanger 1, RCI4, RARE COLD INDUCIBLE 4 0.237 1.263
25 251911_at AT3G53820 [C2H2 and C2HC zinc fingers superfamily protein] 0.237 -0.739
26 257704_at AT3G12720 ATMYB67, myb domain protein 67, ATY53, MYB67, MYB67, myb domain protein 67 -0.498 -0.090
27 262894_at AT1G59780 [NB-ARC domain-containing disease resistance protein] -0.346 -0.902
28 263013_at AT1G23380 KNAT6, KNOTTED1-like homeobox gene 6, KNAT6L, KNAT6S -0.339 -0.907
29 247179_at AT5G65320 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.335 -0.408
30 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 -0.306 1.176
31 259455_x_at AT1G44030 [Cysteine/Histidine-rich C1 domain family protein] -0.293 -1.269
32 255059_at AT4G09420 [Disease resistance protein (TIR-NBS class)] -0.277 0.243
33 261292_at AT1G36940 unknown -0.263 -0.391
34 265151_at AT1G51340 [MATE efflux family protein] -0.263 -0.495
35 249992_at AT5G18560 PUCHI -0.260 -1.097
36 255512_at AT4G02195 ATSYP42, ATTLG2B, SYP42, syntaxin of plants 42, TLG2B -0.253 -0.468
37 251820_at AT3G55040 GSTL2, glutathione transferase lambda 2 -0.246 0.491
38 254147_at AT4G24270 EMB140, EMBRYO DEFECTIVE 140 -0.245 0.425
39 249422_at AT5G39760 AtHB23, homeobox protein 23, HB23, homeobox protein 23, ZHD10, ZINC FINGER HOMEODOMAIN 10 -0.242 0.447
40 260341_at AT1G69170 AtSPL6, SPL6, SQUAMOSA PROMOTER BINDING PROTEIN (SBP)-domain transcription factor 6 -0.226 0.085
41 262183_at AT1G77890 [DNA-directed RNA polymerase II protein] -0.222 -0.126
42 254944_at AT4G10930 unknown -0.222 -0.594
43 255870_at AT2G30280 DMS4, DEFECTIVE IN MERISTEM SILENCING 4, RDM4, RNA-directed DNA methylation 4 -0.218 -0.144
44 261654_at AT1G01920 [SET domain-containing protein] -0.213 0.485
45 264389_at AT1G11960 [ERD (early-responsive to dehydration stress) family protein] -0.213 0.202
46 249907_at AT5G22750 RAD5, RAD5A -0.212 -0.595
47 248835_at AT5G47250 [LRR and NB-ARC domains-containing disease resistance protein] -0.208 -0.173
48 255730_at AT1G25460 [NAD(P)-binding Rossmann-fold superfamily protein] -0.208 -0.221
49 249293_at AT5G41260 BSK8, brassinosteroid-signaling kinase 8 -0.201 -0.734