4.0:Information of module
2hr transitory KNO3 PrR cell
In comparison with root callus inducing medium 12 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 2.517e-11
GO:1901698 response to nitrogen compound BP 2.918e-11
GO:0010200 response to chitin BP 5.935e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006779 porphyrin-containing compound biosynthet... BP 2.266e-03
GO:0006778 porphyrin-containing compound metabolic ... BP 2.289e-03
GO:0033013 tetrapyrrole metabolic process BP 2.289e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr transitory KNO3 PrR cell		 Log2 signal ratio
root callus inducing medium 12 h
1 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.712 -0.910
2 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.670 -0.350
3 264014_at AT2G21210 SAUR6, SMALL AUXIN UPREGULATED RNA 6 0.667 -0.063
4 261842_at AT1G16160 WAKL5, wall associated kinase-like 5 0.585 -0.381
5 254074_at AT4G25490 ATCBF1, CBF1, C-repeat/DRE binding factor 1, DREB1B, DRE BINDING PROTEIN 1B 0.481 -0.696
6 247474_at AT5G62280 unknown 0.480 0.355
7 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 0.454 1.305
8 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.409 -0.326
9 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.406 0.062
10 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.393 -0.390
11 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.377 -0.438
12 252238_at AT3G49960 [Peroxidase superfamily protein] -0.587 0.320
13 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.481 -0.032
14 251882_at AT3G54140 AtNPF8.1, ATPTR1, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 1, NPF8.1, NRT1/ PTR family 8.1, PTR1, peptide transporter 1 -0.457 0.212
15 253382_at AT4G33040 [Thioredoxin superfamily protein] -0.321 -0.020
16 245980_at AT5G13140 [Pollen Ole e 1 allergen and extensin family protein] -0.307 -0.040
17 267148_at AT2G23470 RUS4, ROOT UV-B SENSITIVE 4 -0.253 0.088
18 263005_at AT1G54540 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.243 0.577
19 251227_at AT3G62700 ABCC14, ATP-binding cassette C14, ATMRP10, multidrug resistance-associated protein 10, MRP10, multidrug resistance-associated protein 10 -0.229 0.016
20 246097_at AT5G20270 HHP1, heptahelical transmembrane protein1 -0.227 0.323
21 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.206 0.017