4.0:Information of module
2hr continuous KNO3 PrR cell
In comparison with root cells endodermis and quiescent center -Fe help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 3.867e-04
GO:0010033 response to organic substance BP 4.590e-04
GO:0009750 response to fructose BP 5.070e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009311 oligosaccharide metabolic process BP 3.603e-03
GO:0009312 oligosaccharide biosynthetic process BP 4.362e-03
GO:0009688 abscisic acid biosynthetic process BP 5.379e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KNO3 PrR cell		 Log2 signal ratio
root cells endodermis and quiescent center -Fe
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.773 -0.311
2 264014_at AT2G21210 SAUR6, SMALL AUXIN UPREGULATED RNA 6 0.726 0.222
3 257645_at AT3G25790 [myb-like transcription factor family protein] 0.717 -0.092
4 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.659 -0.441
5 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.615 1.268
6 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.504 -0.013
7 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.463 -0.095
8 265618_at AT2G25460 unknown 0.456 0.385
9 254027_at AT4G25835 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.438 -0.075
10 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.432 -0.214
11 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.421 0.149
12 259015_at AT3G07350 unknown 0.414 0.459
13 247443_at AT5G62720 [Integral membrane HPP family protein] 0.404 0.023
14 248400_at AT5G52020 [Integrase-type DNA-binding superfamily protein] 0.401 0.048
15 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.392 0.704
16 261842_at AT1G16160 WAKL5, wall associated kinase-like 5 0.371 -0.059
17 264202_at AT1G22810 [Integrase-type DNA-binding superfamily protein] 0.371 0.927
18 245779_at AT1G73510 unknown 0.367 0.328
19 246054_at AT5G08360 unknown 0.358 0.201
20 252991_at AT4G38470 STY46, serine/threonine/tyrosine kinase 46 0.355 -0.103
21 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.342 -0.213
22 267263_at AT2G23110 [Late embryogenesis abundant protein, group 6] 0.341 0.285
23 252859_at AT4G39780 [Integrase-type DNA-binding superfamily protein] 0.338 -0.193
24 245264_at AT4G17245 [RING/U-box superfamily protein] 0.332 -0.003
25 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.331 0.147
26 246279_at AT4G36740 ATHB40, homeobox protein 40, HB-5, HB40, homeobox protein 40 0.331 0.463
27 253049_at AT4G37300 MEE59, maternal effect embryo arrest 59 0.318 -0.071
28 265184_at AT1G23710 unknown 0.313 0.690
29 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.307 -0.016
30 250073_at AT5G17170 ENH1, enhancer of sos3-1 0.305 0.012
31 263019_at AT1G23870 ATTPS9, trehalose-phosphatase/synthase 9, TPS9, TREHALOSE -6-PHOSPHATASE SYNTHASE S9, TPS9, trehalose-phosphatase/synthase 9 0.300 -0.160
32 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.296 0.365
33 247492_at AT5G61890 [Integrase-type DNA-binding superfamily protein] 0.294 0.774
34 247543_at AT5G61600 ERF104, ethylene response factor 104 0.287 0.349
35 262284_at AT1G68670 [myb-like transcription factor family protein] 0.278 0.094
36 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.273 -0.064
37 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.272 -0.026
38 251720_at AT3G56160 [Sodium Bile acid symporter family] 0.270 0.211
39 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 0.259 -0.078
40 260522_x_at AT2G41730 unknown 0.257 0.326
41 255734_at AT1G25550 [myb-like transcription factor family protein] 0.257 0.165
42 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.256 0.297
43 248118_at AT5G55050 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.478 -0.284
44 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.425 0.456
45 249812_at AT5G23830 [MD-2-related lipid recognition domain-containing protein] -0.370 -0.043
46 254723_at AT4G13510 AMT1;1, ammonium transporter 1;1, ATAMT1, ARABIDOPSIS THALIANA AMMONIUM TRANSPORT 1, ATAMT1;1 -0.370 -0.299
47 259737_at AT1G64400 LACS3, long-chain acyl-CoA synthetase 3 -0.340 -0.114
48 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] -0.291 0.281
49 250104_at AT5G16610 unknown -0.279 0.264
50 265846_at AT2G35770 scpl28, serine carboxypeptidase-like 28 -0.275 -0.241
51 245310_at AT4G13950 RALFL31, ralf-like 31 -0.264 -0.198
52 267148_at AT2G23470 RUS4, ROOT UV-B SENSITIVE 4 -0.259 -0.019
53 253382_at AT4G33040 [Thioredoxin superfamily protein] -0.256 0.438
54 253112_at AT4G35970 APX5, ascorbate peroxidase 5 -0.236 -0.347
55 260141_at AT1G66350 RGL, RGL1, RGA-like 1 -0.231 0.015
56 254442_at AT4G21060 AtGALT2, GALT2, AGP galactosyltransferase 2 -0.229 0.114
57 259207_at AT3G09050 unknown -0.226 -0.122
58 245990_at AT5G20640 unknown -0.226 -0.292
59 265253_at AT2G02020 AtNPF8.4, AtPTR4, NPF8.4, NRT1/ PTR family 8.4, PTR4, peptide transporter 4 -0.221 -0.124
60 252621_at AT3G45270 [hAT-like transposase family (hobo/Ac/Tam3), has a 5.7e-58 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)] -0.215 -0.031
61 259462_at AT1G18940 [Nodulin-like / Major Facilitator Superfamily protein] -0.213 -0.294
62 252199_at AT3G50270 [HXXXD-type acyl-transferase family protein] -0.210 0.076
63 251716_at AT3G55870 [ADC synthase superfamily protein] -0.207 0.152
64 261841_at AT1G15920 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.207 0.172
65 257805_at AT3G18830 ATPLT5, POLYOL TRANSPORTER 5, ATPMT5, ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, PMT5, polyol/monosaccharide transporter 5 -0.206 0.052
66 263970_at AT2G42850 CYP718, cytochrome P450, family 718 -0.204 -0.418
67 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 -0.200 0.235
68 261085_at AT1G17480 IQD7, IQ-domain 7 -0.198 -0.102
69 265433_at AT2G20950 [Arabidopsis phospholipase-like protein (PEARLI 4) family] -0.198 -0.053
70 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.197 -0.183
71 248055_at AT5G55830 LecRK-S.7, L-type lectin receptor kinase S.7 -0.194 -0.031
72 263232_at AT1G05700 [Leucine-rich repeat transmembrane protein kinase protein] -0.192 -0.920
73 251820_at AT3G55040 GSTL2, glutathione transferase lambda 2 -0.192 -0.066
74 252901_at AT4G39550 [Galactose oxidase/kelch repeat superfamily protein] -0.190 -0.003
75 258470_at AT3G06035 [Glycoprotein membrane precursor GPI-anchored] -0.188 -0.081
76 266068_at AT2G18640 GGPS4, geranylgeranyl pyrophosphate synthase 4 -0.186 -0.158
77 263719_at AT2G13600 SLO2, SLOW GROWTH 2 -0.186 0.046
78 251380_at AT3G60700 unknown -0.186 -0.003
79 254974_at AT4G10490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.184 0.049
80 251805_at AT3G55530 AtSDIR1, SDIR1, SALT- AND DROUGHT-INDUCED RING FINGER1 -0.183 -0.075
81 253500_at AT4G31920 ARR10, response regulator 10, RR10, response regulator 10 -0.177 0.025
82 262780_at AT1G13090 CYP71B28, cytochrome P450, family 71, subfamily B, polypeptide 28 -0.176 0.056
83 247020_at AT5G67020 unknown -0.175 0.484