4.0:Information of module
2hr transitory KNO3 PeR cell
In comparison with Col BTH help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0032504 multicellular organism reproduction BP 6.385e-03
GO:0097164 ammonium ion metabolic process BP 1.220e-02
GO:0048609 multicellular organismal reproductive pr... BP 1.729e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043207 response to external biotic stimulus BP 7.694e-04
GO:0051707 response to other organism BP 7.694e-04
GO:0009607 response to biotic stimulus BP 7.799e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr transitory KNO3 PeR cell		 Log2 signal ratio
Col BTH
1 247246_at AT5G64620 ATC/VIF2, CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2, C/VIF2, cell wall / vacuolar inhibitor of fructosidase 2 0.324 -0.030
2 249262_at AT5G41720 unknown 0.306 -0.002
3 261503_at AT1G71691 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.304 -0.070
4 260642_at AT1G53260 [LOCATED IN: endomembrane system] 0.301 -0.049
5 262630_at AT1G06520 ATGPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, sn-2-GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1 0.299 0.112
6 247762_at AT5G59170 [Proline-rich extensin-like family protein] 0.287 -0.065
7 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 0.285 -0.055
8 252833_at AT4G40090 AGP3, arabinogalactan protein 3 0.285 -0.135
9 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.281 -0.144
10 247201_at AT5G65220 [Ribosomal L29 family protein ] 0.272 -0.031
11 251785_at AT3G55130 ABCG19, ATP-binding cassette G19, ATWBC19, white-brown complex homolog 19, WBC19, white-brown complex homolog 19 0.270 -0.027
12 263907_at AT2G36270 ABI5, ABA INSENSITIVE 5, AtABI5, GIA1, GROWTH-INSENSITIVITY TO ABA 1 0.267 -0.002
13 255577_at AT4G01410 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.264 -0.102
14 246792_at AT5G27290 unknown 0.264 -0.136
15 255826_at AT2G40490 HEME2 0.258 -0.047
16 260402_at AT1G69820 GGT3, gamma-glutamyl transpeptidase 3, GGT4, gamma-glutamyl transpeptidase 4 0.255 -0.041
17 266764_at AT2G47050 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.253 -0.075
18 244950_at ATMG00160 COX2, cytochrome oxidase 2 0.249 0.022
19 254633_at AT4G18640 MRH1, morphogenesis of root hair 1 0.247 -0.178
20 253318_at AT4G33970 [Leucine-rich repeat (LRR) family protein] 0.247 -0.064
21 257869_at AT3G25160 [ER lumen protein retaining receptor family protein] 0.241 0.039
22 256063_at AT1G07130 ATSTN1, STN1 0.236 -0.087
23 253802_at AT4G28180 unknown 0.234 0.007
24 263984_at AT2G42670 unknown 0.232 -0.036
25 251701_at AT3G56650 PPD6, PsbP-domain protein 6 0.229 -0.074
26 251280_at AT3G61810 [Glycosyl hydrolase family 17 protein] 0.227 0.007
27 266347_at AT2G01440 [DEAD/DEAH box RNA helicase family protein ] 0.224 -0.057
28 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] 0.223 -0.067
29 256336_at AT1G72030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.220 -0.040
30 245073_at AT2G23210 [UDP-Glycosyltransferase superfamily protein] 0.219 0.006
31 264007_at AT2G21140 ATPRP2, proline-rich protein 2, PRP2, proline-rich protein 2 0.217 -0.062
32 261798_at AT1G30460 ATCPSF30, ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30, CPSF30, cleavage and polyadenylation specificity factor 30 0.212 0.041
33 247807_at AT5G58360 ATOFP3, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 3, OFP3, ovate family protein 3 0.210 0.086
34 264659_at AT1G09930 ATOPT2, oligopeptide transporter 2, OPT2, oligopeptide transporter 2 0.209 0.033
35 254644_at AT4G18510 CLE2, CLAVATA3/ESR-related 2 0.208 0.021
36 264090_at AT1G79370 CYP79C1, cytochrome P450, family 79, subfamily C, polypeptide 1 0.207 -0.030
37 259827_at AT1G72270 unknown 0.207 -0.001
38 261184_at AT1G34545 [copia-like retrotransposon family, has a 3.0e-112 P-value blast match to GB:CAA72990 open reading frame 2 (Ty1_Copia-element) (Brassica oleracea)] 0.207 -0.005
39 252971_at AT4G38770 ATPRP4, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4, PRP4, proline-rich protein 4 0.206 -0.076
40 267437_at AT2G19200 unknown 0.206 0.007
41 248096_at AT5G55240 ATPXG2, ARABIDOPSIS THALIANA PEROXYGENASE 2 0.203 -0.060
42 257277_at AT3G14470 [NB-ARC domain-containing disease resistance protein] 0.192 0.210
43 255613_at AT4G01270 [RING/U-box superfamily protein] 0.192 0.059
44 252245_at AT3G49710 [Pentatricopeptide repeat (PPR) superfamily protein] 0.190 0.016
45 248275_at AT5G53520 ATOPT8, oligopeptide transporter 8, OPT8, oligopeptide transporter 8 0.190 -0.052
46 257881_at AT3G17180 scpl33, serine carboxypeptidase-like 33 0.189 -0.089
47 246937_at AT5G25370 PLDALPHA3, phospholipase D alpha 3 0.189 -0.060
48 257589_at AT1G55050 unknown 0.188 0.051
49 248621_at AT5G49350 [Glycine-rich protein family] 0.185 -0.103
50 257859_at AT3G12955 SAUR74, SMALL AUXIN UPREGULATED RNA 74 0.185 -0.026
51 248441_at AT5G51270 [U-box domain-containing protein kinase family protein] 0.182 -0.065
52 255329_at AT4G04370 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.182 0.068
53 257255_at AT3G21960 [Receptor-like protein kinase-related family protein] 0.179 -0.047
54 254022_at AT4G25750 ABCG4, ATP-binding cassette G4 0.179 0.016
55 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 0.177 -0.163
56 266376_at AT2G14620 XTH10, xyloglucan endotransglucosylase/hydrolase 10 0.177 0.083
57 259054_at AT3G03480 CHAT, acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0.177 -0.101
58 259073_at AT3G02290 [RING/U-box superfamily protein] 0.176 -0.021
59 267387_at AT2G44440 AtEML4, EML4, EMSY-like 4 0.176 -0.063
60 260733_at AT1G17640 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.176 0.015
61 260306_at AT1G70540 EDA24, embryo sac development arrest 24 0.175 -0.006
62 250940_at AT5G03310 SAUR44, SMALL AUXIN UPREGULATED RNA 44 0.174 -0.054
63 266540_at AT2G35310 [Transcriptional factor B3 family protein] 0.174 -0.040
64 253865_at AT4G27470 ATRMA3, RMA3, RING membrane-anchor 3 0.173 0.056
65 250904_at AT5G03620 [Subtilisin-like serine endopeptidase family protein] 0.172 0.033
66 250958_at AT5G03260 LAC11, laccase 11 0.171 -0.120
67 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] -0.383 -0.060
68 258017_at AT3G19370 unknown -0.362 0.026
69 264767_at AT1G61380 SD1-29, S-domain-1 29 -0.346 0.055
70 258001_at AT3G28950 [AIG2-like (avirulence induced gene) family protein] -0.303 0.091
71 248560_at AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase -0.302 -0.018
72 251022_at AT5G02150 Fes1C, Fes1C -0.300 0.015
73 261402_at AT1G79670 RFO1, RESISTANCE TO FUSARIUM OXYSPORUM 1, WAKL22 -0.290 0.031
74 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 -0.286 -0.039
75 255028_at AT4G09890 unknown -0.285 0.008
76 251940_at AT3G53450 LOG4, LONELY GUY 4 -0.279 -0.022
77 247891_at AT5G57960 [GTP-binding protein, HflX] -0.275 -0.065
78 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.259 0.001
79 249724_at AT5G35450 [Disease resistance protein (CC-NBS-LRR class) family] -0.256 0.058
80 249403_at AT5G40270 [HD domain-containing metal-dependent phosphohydrolase family protein] -0.250 -0.034
81 260244_at AT1G74320 [Protein kinase superfamily protein] -0.248 -0.006
82 244969_at ATCG00650 RPS18, ribosomal protein S18 -0.235 0.007
83 248740_at AT5G48130 [Phototropic-responsive NPH3 family protein] -0.232 -0.045
84 252543_at AT3G45780 JK224, NPH1, NONPHOTOTROPIC HYPOCOTYL 1, PHOT1, phototropin 1, RPT1, ROOT PHOTOTROPISM 1 -0.231 -0.020
85 257655_at AT3G13350 [HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain] -0.225 0.083
86 251197_at AT3G62960 [Thioredoxin superfamily protein] -0.216 0.083
87 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] -0.215 0.123
88 251633_at AT3G57460 [catalytics] -0.213 0.179
89 259110_at AT3G05570 unknown -0.212 0.029
90 247212_at AT5G65040 unknown -0.207 0.035
91 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] -0.203 -0.019
92 261039_at AT1G17455 ELF4-L4, ELF4-like 4 -0.203 0.025
93 258138_at AT3G24495 ATMSH7, ARABIDOPSIS THALIANA MUTS HOMOLOG 7, MSH6-2, MUTS HOMOLOG 6-2, MSH7, MUTS homolog 7 -0.202 -0.050
94 254112_at AT4G24970 [Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein] -0.201 0.106
95 247679_at AT5G59540 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.197 -0.016
96 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.194 -0.185
97 260974_at AT1G53440 [Leucine-rich repeat transmembrane protein kinase] -0.194 0.021
98 251652_at AT3G57380 [Glycosyltransferase family 61 protein] -0.194 -0.031
99 247024_at AT5G66985 unknown -0.192 -0.068
100 246536_at AT5G15920 EMB2782, EMBRYO DEFECTIVE 2782, SMC5, structural maintenance of chromosomes 5 -0.190 -0.008
101 246782_at AT5G27320 ATGID1C, GID1C, GA INSENSITIVE DWARF1C -0.189 -0.012
102 265088_at AT1G03750 CHR9, CHROMATIN REMODELING 9 -0.187 0.007
103 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.179 -0.141
104 250346_at AT5G11950 LOG8, LONELY GUY 8 -0.175 0.050
105 254586_at AT4G19510 [Disease resistance protein (TIR-NBS-LRR class)] -0.174 0.041
106 267012_at AT2G39220 PLA IIB, PLP6, PATATIN-like protein 6 -0.174 0.023
107 248102_at AT5G55140 [ribosomal protein L30 family protein] -0.173 -0.016
108 259818_at AT1G49890 QWRF2, QWRF domain containing 2 -0.173 -0.020
109 253627_at AT4G30650 [Low temperature and salt responsive protein family] -0.172 -0.053
110 266662_at AT2G25830 [YebC-related] -0.170 -0.076
111 248553_at AT5G50170 [C2 calcium/lipid-binding and GRAM domain containing protein] -0.168 -0.103
112 255877_at AT2G40460 [Major facilitator superfamily protein] -0.168 0.059
113 259637_at AT1G52260 ATPDI3, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, ATPDIL1-5, PDI-like 1-5, PDI3, PROTEIN DISULFIDE ISOMERASE 3, PDIL1-5, PDI-like 1-5 -0.167 0.001
114 260231_at AT1G74410 [RING/U-box superfamily protein] -0.162 0.036
115 260154_at AT1G52740 HTA9, histone H2A protein 9 -0.160 -0.007
116 261803_at AT1G30500 NF-YA7, nuclear factor Y, subunit A7 -0.160 0.059
117 257734_at AT3G18370 ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF -0.160 0.076
118 254760_at AT4G13200 unknown -0.158 -0.020
119 247832_at AT5G58550 EOL2, ETO1-like 2 -0.158 -0.149
120 255077_at AT4G09150 [T-complex protein 11] -0.156 -0.018
121 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor -0.156 -0.121
122 262668_at AT1G62830 ATLSD1, ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LDL1, LSD1-like 1, LSD1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 -0.156 -0.028
123 257144_at AT3G27300 G6PD5, glucose-6-phosphate dehydrogenase 5 -0.156 0.022
124 250405_at AT5G10790 UBP22, ubiquitin-specific protease 22 -0.152 0.007
125 266727_at AT2G03150 emb1579, embryo defective 1579 -0.150 0.027
126 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.150 0.146
127 251309_at AT3G61220 SDR1, short-chain dehydrogenase/reductase 1 -0.149 -0.029
128 250159_at AT5G15200 [Ribosomal protein S4] -0.149 -0.009
129 250861_at AT5G04740 ACR12, ACT domain repeats 12 -0.148 -0.043
130 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 -0.146 -0.150
131 254605_at AT4G18950 [Integrin-linked protein kinase family] -0.145 0.059