4.0:Information of module
2hr continuous KNO3 and MSX PeR cell
In comparison with Col0 roots 2hr KNO3 nitrogen help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 9.193e-09
GO:0010038 response to metal ion BP 3.521e-08
GO:0046686 response to cadmium ion BP 8.497e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071483 cellular response to blue light BP 8.838e-05
GO:0071214 cellular response to abiotic stimulus BP 7.474e-04
GO:0005975 carbohydrate metabolic process BP 1.488e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KNO3 and MSX PeR cell		 Log2 signal ratio
Col0 roots 2hr KNO3 nitrogen
1 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.641 0.113
2 247218_at AT5G65010 ASN2, asparagine synthetase 2 0.590 0.180
3 246142_at AT5G19970 unknown 0.561 0.137
4 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.558 0.157
5 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 0.558 0.095
6 250472_at AT5G10210 unknown 0.531 0.236
7 253864_at AT4G27460 CBSX5, CBS domain containing protein 5 0.485 0.075
8 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.474 0.235
9 249927_at AT5G19220 ADG2, ADP GLUCOSE PYROPHOSPHORYLASE 2, APL1, ADP glucose pyrophosphorylase large subunit 1 0.463 -0.082
10 245117_at AT2G41560 ACA4, autoinhibited Ca(2+)-ATPase, isoform 4 0.450 0.203
11 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.421 0.167
12 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.412 0.225
13 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.379 0.150
14 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.374 0.140
15 263319_at AT2G47160 AtBOR1, BOR1, REQUIRES HIGH BORON 1 0.363 0.067
16 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 0.359 0.175
17 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 0.340 0.175
18 251195_at AT3G62930 [Thioredoxin superfamily protein] 0.340 0.087
19 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.303 0.256
20 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.301 0.125
21 251396_at AT3G60750 AtTKL1, TKL1, transketolase 1 0.300 0.131
22 249266_at AT5G41670 [6-phosphogluconate dehydrogenase family protein] 0.299 0.188
23 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 -0.442 -0.040
24 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H -0.429 0.034
25 260968_at AT1G12250 [Pentapeptide repeat-containing protein] -0.407 -0.057
26 255294_at AT4G04750 [Major facilitator superfamily protein] -0.313 -0.020
27 247136_at AT5G66170 STR18, sulfurtransferase 18 -0.305 0.000
28 261133_at AT1G19715 [Mannose-binding lectin superfamily protein] -0.296 -0.154
29 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] -0.279 0.064
30 264402_at AT2G25140 CLPB-M, CASEIN LYTIC PROTEINASE B-M, CLPB4, casein lytic proteinase B4, HSP98.7, HEAT SHOCK PROTEIN 98.7 -0.277 -0.047
31 257814_at AT3G25110 AtFaTA, fatA acyl-ACP thioesterase, FaTA, fatA acyl-ACP thioesterase -0.268 0.088
32 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.258 -0.007
33 254193_at AT4G23870 unknown -0.253 -0.065
34 267077_at AT2G40970 MYBC1 -0.251 -0.175
35 264902_at AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 -0.243 0.056
36 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 -0.241 -0.009
37 247352_at AT5G63650 SNRK2-5, SNRK2.5, SNF1-related protein kinase 2.5, SRK2H, SNF1-RELATED PROTEIN KINASE 2H -0.239 -0.073
38 254209_at AT4G23490 unknown -0.233 -0.130
39 266197_at AT2G39120 WTF9, what's this factor 9 -0.233 -0.030
40 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 -0.227 -0.044
41 260540_at AT2G43500 NLP8, NIN-like protein 8 -0.225 -0.170
42 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 -0.224 0.004
43 254412_at AT4G21430 B160 -0.220 0.015