4.0:Information of module
2hr continuous KNO3 and MSX PeR cell
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 9.193e-09
GO:0010038 response to metal ion BP 3.521e-08
GO:0046686 response to cadmium ion BP 8.497e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071483 cellular response to blue light BP 8.838e-05
GO:0071214 cellular response to abiotic stimulus BP 7.474e-04
GO:0005975 carbohydrate metabolic process BP 1.488e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KNO3 and MSX PeR cell		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.641 -0.021
2 247218_at AT5G65010 ASN2, asparagine synthetase 2 0.590 0.006
3 246142_at AT5G19970 unknown 0.561 0.014
4 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.558 0.065
5 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 0.558 0.000
6 250472_at AT5G10210 unknown 0.531 -0.044
7 253864_at AT4G27460 CBSX5, CBS domain containing protein 5 0.485 0.028
8 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.474 -0.016
9 249927_at AT5G19220 ADG2, ADP GLUCOSE PYROPHOSPHORYLASE 2, APL1, ADP glucose pyrophosphorylase large subunit 1 0.463 0.038
10 245117_at AT2G41560 ACA4, autoinhibited Ca(2+)-ATPase, isoform 4 0.450 -0.004
11 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.421 0.034
12 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.412 -0.063
13 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.379 0.001
14 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.374 0.016
15 263319_at AT2G47160 AtBOR1, BOR1, REQUIRES HIGH BORON 1 0.363 0.012
16 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 0.359 0.013
17 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 0.340 -0.023
18 251195_at AT3G62930 [Thioredoxin superfamily protein] 0.340 -0.028
19 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.303 -0.080
20 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.301 0.045
21 251396_at AT3G60750 AtTKL1, TKL1, transketolase 1 0.300 0.024
22 249266_at AT5G41670 [6-phosphogluconate dehydrogenase family protein] 0.299 0.003
23 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 -0.442 -0.032
24 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H -0.429 0.068
25 260968_at AT1G12250 [Pentapeptide repeat-containing protein] -0.407 0.026
26 255294_at AT4G04750 [Major facilitator superfamily protein] -0.313 0.101
27 247136_at AT5G66170 STR18, sulfurtransferase 18 -0.305 0.008
28 261133_at AT1G19715 [Mannose-binding lectin superfamily protein] -0.296 0.055
29 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] -0.279 0.089
30 264402_at AT2G25140 CLPB-M, CASEIN LYTIC PROTEINASE B-M, CLPB4, casein lytic proteinase B4, HSP98.7, HEAT SHOCK PROTEIN 98.7 -0.277 -0.007
31 257814_at AT3G25110 AtFaTA, fatA acyl-ACP thioesterase, FaTA, fatA acyl-ACP thioesterase -0.268 0.017
32 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.258 0.011
33 254193_at AT4G23870 unknown -0.253 0.004
34 267077_at AT2G40970 MYBC1 -0.251 0.019
35 264902_at AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 -0.243 0.010
36 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 -0.241 0.109
37 247352_at AT5G63650 SNRK2-5, SNRK2.5, SNF1-related protein kinase 2.5, SRK2H, SNF1-RELATED PROTEIN KINASE 2H -0.239 -0.013
38 254209_at AT4G23490 unknown -0.233 0.055
39 266197_at AT2G39120 WTF9, what's this factor 9 -0.233 -0.037
40 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 -0.227 0.020
41 260540_at AT2G43500 NLP8, NIN-like protein 8 -0.225 0.011
42 251584_at AT3G58620 TTL4, tetratricopetide-repeat thioredoxin-like 4 -0.224 0.055
43 254412_at AT4G21430 B160 -0.220 0.008