4.0:Information of module
2hr continuous KCl and MSX control PeR cell
In comparison with Split KNO3 roots - 2hours help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001101 response to acid chemical BP 1.199e-04
GO:1901700 response to oxygen-containing compound BP 1.278e-04
GO:0015996 chlorophyll catabolic process BP 9.374e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 2.434e-26
GO:0043414 macromolecule methylation BP 3.003e-24
GO:0032259 methylation BP 5.889e-24
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KCl and MSX control PeR cell		 Log2 signal ratio
Split KNO3 roots - 2hours
1 263658_at AT1G04490 unknown 0.652 0.011
2 251019_at AT5G02420 unknown 0.643 -0.059
3 263575_at AT2G17070 unknown 0.618 0.026
4 252218_at AT3G50150 unknown 0.608 -0.049
5 259027_at AT3G09280 unknown 0.583 0.005
6 266032_x_at AT2G05890 unknown 0.544 -0.005
7 253827_at AT4G28085 unknown 0.540 0.006
8 254205_at AT4G24170 [ATP binding microtubule motor family protein] 0.521 -0.007
9 253036_at AT4G38340 NLP3, NIN-like protein 3 0.514 -0.004
10 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.509 0.070
11 264534_at AT1G55700 [Cysteine/Histidine-rich C1 domain family protein] 0.502 0.005
12 247704_at AT5G59510 DVL18, DEVIL 18, RTFL5, ROTUNDIFOLIA like 5 0.479 0.008
13 250327_at AT5G12050 unknown 0.479 -0.020
14 257110_x_at AT3G30440 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G14130.1)] 0.472 0.011
15 255197_x_at AT4G07450 unknown 0.450 -0.030
16 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.446 -0.008
17 249893_at AT5G22555 unknown 0.443 -0.002
18 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] 0.442 0.015
19 264866_at AT1G24140 [Matrixin family protein] 0.442 -0.042
20 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 0.441 -0.009
21 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.429 -0.037
22 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 0.425 -0.057
23 248411_at AT5G51580 unknown 0.423 0.017
24 253737_at AT4G28703 [RmlC-like cupins superfamily protein] 0.396 -0.044
25 251238_at AT3G62430 [Protein with RNI-like/FBD-like domains] 0.386 0.013
26 253179_at AT4G35200 unknown 0.369 0.045
27 253133_at AT4G35800 NRPB1, RNA polymerase II large subunit, RNA_POL_II_LS, RNA POLYMERASE II LARGE SUBUNIT, RNA_POL_II_LSRNA_POL_II_LS, RPB1, RNA POLYMERASE II LARGE SUBUNIT 0.338 0.018
28 258307_x_at AT3G30560 [similar to AT hook motif-containing protein-related [Arabidopsis thaliana] (TAIR:AT1G35940.1)] 0.333 -0.008
29 253293_at AT4G33905 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] 0.331 0.021
30 263837_at AT2G04500 [Cysteine/Histidine-rich C1 domain family protein] 0.325 -0.015
31 261142_at AT1G19780 ATCNGC8, cyclic nucleotide gated channel 8, CNGC8, cyclic nucleotide gated channel 8 0.313 -0.009
32 263070_at AT2G17600 [Cysteine/Histidine-rich C1 domain family protein] 0.310 -0.009
33 260103_at AT1G35430 unknown 0.303 -0.001
34 259481_at AT1G18970 GLP4, germin-like protein 4 0.300 -0.031
35 250719_at AT5G06250 DPA4, DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4 0.297 -0.016
36 254193_at AT4G23870 unknown 0.296 -0.042
37 253814_at AT4G28290 unknown 0.294 0.058
38 253318_at AT4G33970 [Leucine-rich repeat (LRR) family protein] 0.293 -0.023
39 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 0.291 0.051
40 250958_at AT5G03260 LAC11, laccase 11 0.288 -0.010
41 247137_at AT5G66210 CPK28, calcium-dependent protein kinase 28 0.284 0.009
42 248358_at AT5G52400 CYP715A1, cytochrome P450, family 715, subfamily A, polypeptide 1 0.281 0.043
43 259738_at AT1G64355 unknown 0.273 0.042
44 247751_at AT5G59050 unknown 0.273 -0.034
45 257511_at AT1G43000 [PLATZ transcription factor family protein] 0.268 0.010
46 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.268 -0.009
47 261834_at AT1G10640 [Pectin lyase-like superfamily protein] 0.266 0.078
48 260030_at AT1G68880 AtbZIP, basic leucine-zipper 8, bZIP, basic leucine-zipper 8 -0.988 0.039
49 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.723 0.073
50 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 -0.667 0.190
51 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.664 0.039
52 246215_at AT4G37180 [Homeodomain-like superfamily protein] -0.664 -0.013
53 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 -0.592 -0.007
54 257066_at AT3G18280 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.562 0.024
55 253949_at AT4G26780 AR192, MGE2, mitochondrial GrpE 2 -0.558 -0.005
56 245393_at AT4G16260 [Glycosyl hydrolase superfamily protein] -0.532 -0.010
57 251956_at AT3G53460 CP29, chloroplast RNA-binding protein 29 -0.523 -0.038
58 263483_at AT2G04030 AtHsp90.5, HEAT SHOCK PROTEIN 90.5, AtHsp90C, CR88, EMB1956, EMBRYO DEFECTIVE 1956, Hsp88.1, HEAT SHOCK PROTEIN 88.1, HSP90.5, HEAT SHOCK PROTEIN 90.5 -0.511 0.007
59 262876_at AT1G64750 ATDSS1(I), deletion of SUV3 suppressor 1(I), DSS1(I), deletion of SUV3 suppressor 1(I) -0.497 -0.016
60 255586_at AT4G01560 MEE49, maternal effect embryo arrest 49 -0.490 0.003
61 265966_at AT2G37220 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.486 -0.052
62 264188_at AT1G54690 G-H2AX, GAMMA H2AX, GAMMA-H2AX, gamma histone variant H2AX, H2AXB, HTA3, histone H2A 3 -0.463 0.001
63 256978_at AT3G21110 ATPURC, PUR7, purin 7, PURC, PURIN C -0.461 -0.001
64 258155_at AT3G18130 RACK1C, receptor for activated C kinase 1C, RACK1C_AT, receptor for activated C kinase 1C -0.461 0.000
65 263882_at AT2G21790 ATRNR1, RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1, CLS8, CRINKLY LEAVES 8, DPD2, defective in pollen organelle DNA degradation 2, R1, RIBONUCLEOTIDE REDUCTASE 1, RNR1, ribonucleotide reductase 1 -0.460 -0.006
66 247912_at AT5G57480 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.449 0.028
67 267102_at AT2G41500 EMB2776, LIS, LACHESIS -0.427 0.004
68 258794_at AT3G04710 TPR10, tetratricopeptide repeat 10 -0.420 -0.017
69 251740_at AT3G56070 ROC2, rotamase cyclophilin 2 -0.417 -0.002
70 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.413 -0.133
71 261911_at AT1G80750 [Ribosomal protein L30/L7 family protein] -0.397 -0.004
72 266980_at AT2G39390 [Ribosomal L29 family protein ] -0.394 0.001
73 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.393 0.062
74 246278_at AT4G37190 [LOCATED IN: cytosol, plasma membrane] -0.386 -0.014
75 245122_at AT2G47420 DIM1A, adenosine dimethyl transferase 1A -0.378 0.014
76 262415_at AT1G49400 emb1129, embryo defective 1129 -0.376 -0.008
77 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.368 -0.002
78 248254_at AT5G53320 [Leucine-rich repeat protein kinase family protein] -0.367 0.087
79 261655_at AT1G01940 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] -0.366 -0.010
80 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.365 0.112
81 250222_at AT5G14050 [Transducin/WD40 repeat-like superfamily protein] -0.362 0.014
82 249466_at AT5G39740 OLI7, OLIGOCELLULA 7, RPL5B, ribosomal protein L5 B -0.362 -0.003
83 253687_at AT4G29520 [LOCATED IN: endoplasmic reticulum, plasma membrane] -0.361 -0.001
84 258166_at AT3G21540 [transducin family protein / WD-40 repeat family protein] -0.360 0.023
85 249938_at AT5G22330 ATTIP49A, RIN1, RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 -0.360 0.004
86 259908_at AT1G60850 AAC42, ATRPAC42 -0.354 0.002
87 249901_at AT5G22650 ATHD2, ARABIDOPSIS HISTONE DEACETYLASE 2, ATHD2B, HD2, HISTONE DEACETYLASE 2, HD2B, histone deacetylase 2B, HDA4, HDT02, HDT2 -0.354 -0.010
88 257018_at AT3G19630 [Radical SAM superfamily protein] -0.353 -0.012
89 253754_at AT4G29020 [glycine-rich protein] -0.352 -0.033
90 254684_at AT4G13850 ATGRP2, GLYCINE-RICH RNA-BINDING PROTEIN 2, GR-RBP2, glycine-rich RNA-binding protein 2, GRP2, glycine rich protein 2 -0.348 -0.001
91 256173_at AT1G51730 [Ubiquitin-conjugating enzyme family protein] -0.344 0.004
92 247497_at AT5G61770 PPAN, PETER PAN-like protein -0.344 0.014
93 251638_at AT3G57490 [Ribosomal protein S5 family protein] -0.337 -0.012