4.0:Information of module
2hr transitory KNO3 ECR cell
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 4.428e-07
GO:0010038 response to metal ion BP 1.407e-06
GO:0015706 nitrate transport BP 8.124e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 5.650e-23
GO:0019684 photosynthesis, light reaction BP 7.302e-20
GO:0006364 rRNA processing BP 2.205e-18
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr transitory KNO3 ECR cell		 Log2 signal ratio
bri1-116
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.937 0.091
2 245258_at AT4G15340 04C11, ATPEN1, pentacyclic triterpene synthase 1, PEN1, pentacyclic triterpene synthase 1 0.680 -0.294
3 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.668 0.247
4 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.661 -0.469
5 266700_at AT2G19740 [Ribosomal protein L31e family protein] 0.610 0.078
6 246142_at AT5G19970 unknown 0.542 -0.416
7 261791_at AT1G16170 unknown 0.539 0.163
8 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.525 -0.089
9 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 0.512 0.124
10 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.506 0.048
11 261410_at AT1G07610 MT1C, metallothionein 1C 0.501 -0.031
12 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.488 0.206
13 249266_at AT5G41670 [6-phosphogluconate dehydrogenase family protein] 0.446 0.021
14 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.445 0.396
15 247218_at AT5G65010 ASN2, asparagine synthetase 2 0.409 0.226
16 247443_at AT5G62720 [Integral membrane HPP family protein] 0.407 0.064
17 262180_at AT1G78050 PGM, phosphoglycerate/bisphosphoglycerate mutase 0.402 0.010
18 251195_at AT3G62930 [Thioredoxin superfamily protein] 0.397 0.079
19 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.384 -0.237
20 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.368 -0.094
21 264760_at AT1G61290 ATSYP124, SYP124, syntaxin of plants 124 0.352 0.042
22 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.347 0.002
23 259015_at AT3G07350 unknown 0.342 0.223
24 251396_at AT3G60750 AtTKL1, TKL1, transketolase 1 0.342 0.092
25 247775_at AT5G58690 ATPLC5, PLC5, phosphatidylinositol-speciwc phospholipase C5 0.339 -0.027
26 252991_at AT4G38470 STY46, serine/threonine/tyrosine kinase 46 0.335 -0.250
27 252463_at AT3G47070 [LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope] -0.782 0.220
28 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.638 0.248
29 264636_at AT1G65490 unknown -0.631 0.172
30 263761_at AT2G21330 AtFBA1, FBA1, fructose-bisphosphate aldolase 1 -0.630 0.295
31 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.592 -0.519
32 264837_at AT1G03600 PSB27 -0.557 0.182
33 261769_at AT1G76100 PETE1, plastocyanin 1 -0.556 0.335
34 247073_at AT5G66570 MSP-1, MANGANESE-STABILIZING PROTEIN 1, OE33, OXYGEN EVOLVING COMPLEX 33 KILODALTON PROTEIN, OEE1, 33 KDA OXYGEN EVOLVING POLYPEPTIDE 1, OEE33, OXYGEN EVOLVING ENHANCER PROTEIN 33, PSBO-1, PS II OXYGEN-EVOLVING COMPLEX 1, PSBO1, PS II oxygen-evolving complex 1 -0.461 0.230
35 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.451 0.412
36 263350_at AT2G13360 AGT, alanine:glyoxylate aminotransferase, AGT1, ALANINE:GLYOXYLATE AMINOTRANSFERASE 1, SGAT, L-serine:glyoxylate aminotransferase -0.446 0.051
37 265287_at AT2G20260 PSAE-2, photosystem I subunit E-2 -0.445 0.139
38 258993_at AT3G08940 LHCB4.2, light harvesting complex photosystem II -0.441 0.129
39 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.414 -0.188
40 251762_at AT3G55800 SBPASE, sedoheptulose-bisphosphatase -0.409 0.202
41 257168_at AT3G24430 HCF101, HIGH-CHLOROPHYLL-FLUORESCENCE 101 -0.403 0.140
42 247214_at AT5G64850 unknown -0.390 -0.224
43 258223_at AT3G15840 PIFI, post-illumination chlorophyll fluorescence increase -0.387 0.247
44 254998_at AT4G09760 [Protein kinase superfamily protein] -0.380 -0.087
45 248118_at AT5G55050 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.378 0.048
46 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 -0.366 0.022
47 256880_at AT3G26450 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.363 -0.424
48 248961_at AT5G45650 [subtilase family protein] -0.351 0.180
49 265182_at AT1G23740 AOR, alkenal/one oxidoreductase -0.336 0.183
50 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.306 -0.022
51 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.296 0.163